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Map Overview
Name | DH962 x Ji Mian 5, RIL (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | JoinMap 3.0 |
Map type | genetic |
Population type | RIL |
Population size | 178 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Population size | 178 |
Number of loci | 729 |
Number of QTL | 218 |
Number of linkage groups | 61 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Map Loci
This map contains 729 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU4552 | HAU4552 | marker_locus | 0 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | CGR5282 | MON_CGR5282 | marker_locus | 7.1 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | DPL0752 | DPL0752 | marker_locus | 20.8 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | CGR5056 | MON_CGR5056 | marker_locus | 22.7 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | NAU2741 | nau2741 | marker_locus | 25.4 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-DJ-S081 | HAU-DJ-S081 | marker_locus | 26.6 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-DJ-I027 | HAU-DJ-I027 | marker_locus | 27.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | NAU5163 | NAU5163 | marker_locus | 27.8 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU1693 | HAU1693 | marker_locus | 29.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-DJ-I038 | HAU-DJ-I038b | marker_locus | 30.8 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-J6039 | HAU-J6039 | marker_locus | 31.3 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-J5712 | HAU-J5712 | marker_locus | 31.8 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-DJ-S233 | HAU-DJ-S233 | marker_locus | 34.6 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-D5478 | HAU-D5478 | marker_locus | 35.1 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | DPL0407 | MON_DPL0407 | marker_locus | 37.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | BNL2921 | BNL2921 | marker_locus | 38.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | Gh216 | Gh216 | marker_locus | 39.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | CGR5853 | MON_CGR5853 | marker_locus | 42.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | DPL0419 | MON_DPL0419 | marker_locus | 43.4 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | DPL0052 | MON_DPL0052 | marker_locus | 44.7 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | HAU-D5005 | HAU-D5005 | marker_locus | 45.7 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | TMB0791 | TMB0791 | marker_locus | 47.2 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | NAU4891 | NAU4891 | marker_locus | 49 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | CGR6586 | MON_CGR6586 | marker_locus | 52.4 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | NBRI_e1952 | NBRI_HQ527867 | marker_locus | 54.1 cM |
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Map QTL
This map contains 218 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01 | qBN.DJiM-RIL_ch01.h11 | QTL | 55.1 cM | 61.8 cM | 57.86 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr05-1 | qBN.DJiM-RIL_ch05-1.h12 | QTL | 0 cM | 6.2 cM | 4.01 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06 | qBN.DJiM-RIL_ch06.h13.1 | QTL | 30.8 cM | 34.5 cM | 31.4 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06 | qBN.DJiM-RIL_ch06.h13.2 | QTL | 34.5 cM | 37.7 cM | 36.89 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06 | qBN.DJiM-RIL_ch06.h13.3 | QTL | 38.4 cM | 44.3 cM | 39.02 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09 | qBN.DJiM-RIL_ch09.h13 | QTL | 56.5 cM | 57.8 cM | 57.55 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09-1 | qBN.DJiM-RIL_ch09-1.h11.1 | QTL | 0 cM | 10.8 cM | 6.01 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09-1 | qBN.DJiM-RIL_ch09-1.h11.2 | QTL | 10.8 cM | 19.2 cM | 16.81 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr13-2 | qBN.DJiM-RIL_ch13-2.h12 | QTL | 0 cM | 4.6 cM | 0.01 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15 | qBN.DJiM-RIL_ch15.h11 | QTL | 55.1 cM | 61.8 cM | 57.86 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15-1 | qBN.DJiM-RIL_ch15-1.j11.1 | QTL | 7.1 cM | 8.3 cM | 8.13 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15-1 | qBN.DJiM-RIL_ch15-1.j11.2 | QTL | 9.9 cM | 14.9 cM | 12.33 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr16 | qBN.DJiM-RIL_ch16.hj08-13.1 | QTL | 4.6 cM | 9.8 cM | 7.04 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr16 | qBN.DJiM-RIL_ch16.hj08-13.2 | QTL | 9.8 cM | 15.1 cM | 11.32 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr17-1 | qBN.DJiM-RIL_ch17-1.h11 | QTL | 0 cM | 10.9 cM | 0.01 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr23 | qBN.DJiM-RIL_ch23.h13 | QTL | 56.5 cM | 57.8 cM | 57.55 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr24-2 | qBN.DJiM-RIL_ch24-2.h11 | QTL | 6.7 cM | 19.4 cM | 13.75 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-1 | qBN.DJiM-RIL_ch25-1.h12 | QTL | 9.7 cM | 17 cM | 12.58 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-1 | qBN.DJiM-RIL_ch25-1.hj08-13 | QTL | 9.7 cM | 33 cM | 25.93 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-2 | qBN.DJiM-RIL_ch25-2.hj08-13 | QTL | 35.2 cM | 42.7 cM | 37.58 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr04 | qBWT.DJiM-RIL_ch04.j08 | QTL | 30.5 cM | 56.8 cM | 47.4 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr05-1 | qBWT.DJiM-RIL_ch05-1.h13 | QTL | 0 cM | 6.2 cM | 6.01 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09 | qBWT.DJiM-RIL_ch09.h11.1 | QTL | 28.2 cM | 29.6 cM | 29.24 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09 | qBWT.DJiM-RIL_ch09.h11.2 | QTL | 31.6 cM | 34.3 cM | 33.3 cM |
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09 | qBWT.DJiM-RIL_ch09.hj08-13.1 | QTL | 20.2 cM | 22.5 cM | 22.16 cM |
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Stock
Name | Type | Details |
DH962 x Ji Mian 5, RIL | population | Secondary id: | cdbpop_000160 | Origin detail: | China | Population size: | 178 | Alias: | DJiM-RIL | Pedigree: | DH962 / Ji Mian 5 |
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