DH962 x Ji Mian 5, RIL (2015)

Map Overview


Name	DH962 x Ji Mian 5, RIL (2015)
Species	Gossypium hirsutum
Analysis method	composite interval mapping
Software	JoinMap 3.0
Map type	genetic
Population type	RIL
Population size	178
Genome group	AD
Map unit	cM
Maternal parent	DH962
Paternal parent	Ji Mian 5
Population size	178
Number of loci	729
Number of QTL	218
Number of linkage groups	61
Publication	[view all]
Contact	Lin, Zhong-Xu

Map Loci

This map contains 729 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU4552	HAU4552	marker_locus	0 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	CGR5282	MON_CGR5282	marker_locus	7.1 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	DPL0752	DPL0752	marker_locus	20.8 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	CGR5056	MON_CGR5056	marker_locus	22.7 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	NAU2741	nau2741	marker_locus	25.4 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-DJ-S081	HAU-DJ-S081	marker_locus	26.6 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-DJ-I027	HAU-DJ-I027	marker_locus	27.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	NAU5163	NAU5163	marker_locus	27.8 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU1693	HAU1693	marker_locus	29.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-DJ-I038	HAU-DJ-I038b	marker_locus	30.8 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-J6039	HAU-J6039	marker_locus	31.3 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-J5712	HAU-J5712	marker_locus	31.8 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-DJ-S233	HAU-DJ-S233	marker_locus	34.6 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-D5478	HAU-D5478	marker_locus	35.1 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	DPL0407	MON_DPL0407	marker_locus	37.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	BNL2921	BNL2921	marker_locus	38.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	Gh216	Gh216	marker_locus	39.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	CGR5853	MON_CGR5853	marker_locus	42.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	DPL0419	MON_DPL0419	marker_locus	43.4 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	DPL0052	MON_DPL0052	marker_locus	44.7 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	HAU-D5005	HAU-D5005	marker_locus	45.7 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	TMB0791	TMB0791	marker_locus	47.2 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	NAU4891	NAU4891	marker_locus	49 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	CGR6586	MON_CGR6586	marker_locus	52.4 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	NBRI_e1952	NBRI_HQ527867	marker_locus	54.1 cM

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Map QTL

This map contains 218 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr01	qBN.DJiM-RIL_ch01.h11	QTL	55.1 cM	61.8 cM	57.86 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr05-1	qBN.DJiM-RIL_ch05-1.h12	QTL	0 cM	6.2 cM	4.01 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06	qBN.DJiM-RIL_ch06.h13.1	QTL	30.8 cM	34.5 cM	31.4 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06	qBN.DJiM-RIL_ch06.h13.2	QTL	34.5 cM	37.7 cM	36.89 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr06	qBN.DJiM-RIL_ch06.h13.3	QTL	38.4 cM	44.3 cM	39.02 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09	qBN.DJiM-RIL_ch09.h13	QTL	56.5 cM	57.8 cM	57.55 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09-1	qBN.DJiM-RIL_ch09-1.h11.1	QTL	0 cM	10.8 cM	6.01 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09-1	qBN.DJiM-RIL_ch09-1.h11.2	QTL	10.8 cM	19.2 cM	16.81 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr13-2	qBN.DJiM-RIL_ch13-2.h12	QTL	0 cM	4.6 cM	0.01 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15	qBN.DJiM-RIL_ch15.h11	QTL	55.1 cM	61.8 cM	57.86 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15-1	qBN.DJiM-RIL_ch15-1.j11.1	QTL	7.1 cM	8.3 cM	8.13 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr15-1	qBN.DJiM-RIL_ch15-1.j11.2	QTL	9.9 cM	14.9 cM	12.33 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr16	qBN.DJiM-RIL_ch16.hj08-13.1	QTL	4.6 cM	9.8 cM	7.04 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr16	qBN.DJiM-RIL_ch16.hj08-13.2	QTL	9.8 cM	15.1 cM	11.32 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr17-1	qBN.DJiM-RIL_ch17-1.h11	QTL	0 cM	10.9 cM	0.01 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr23	qBN.DJiM-RIL_ch23.h13	QTL	56.5 cM	57.8 cM	57.55 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr24-2	qBN.DJiM-RIL_ch24-2.h11	QTL	6.7 cM	19.4 cM	13.75 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-1	qBN.DJiM-RIL_ch25-1.h12	QTL	9.7 cM	17 cM	12.58 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-1	qBN.DJiM-RIL_ch25-1.hj08-13	QTL	9.7 cM	33 cM	25.93 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr25-2	qBN.DJiM-RIL_ch25-2.hj08-13	QTL	35.2 cM	42.7 cM	37.58 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr04	qBWT.DJiM-RIL_ch04.j08	QTL	30.5 cM	56.8 cM	47.4 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr05-1	qBWT.DJiM-RIL_ch05-1.h13	QTL	0 cM	6.2 cM	6.01 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09	qBWT.DJiM-RIL_ch09.h11.1	QTL	28.2 cM	29.6 cM	29.24 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09	qBWT.DJiM-RIL_ch09.h11.2	QTL	31.6 cM	34.3 cM	33.3 cM
DH962 x Ji Mian 5, RIL (2015).DJiM-RIL_chr09	qBWT.DJiM-RIL_ch09.hj08-13.1	QTL	20.2 cM	22.5 cM	22.16 cM

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Contact

Name

Details

Lin, Zhong-Xu

First name:	Zhong-Xu
Last name:	Lin
Address:	shizishan 1, wuhan, hubei 430070
Country:	China
Email:	linzhongxu@mail.hzau.edu.cn
Phone:	+86 027 87283955
Last update:	5-Mar-2007

Stock

Name

Type

Details

DH962 x Ji Mian 5, RIL

population

Secondary id:	cdbpop_000160
Origin detail:	China
Population size:	178
Alias:	DJiM-RIL
Pedigree:	DH962 / Ji Mian 5

Publication


Year	Publications
2015	Wang H, Huang C, Guo H, Li X, Zhao W, Dai B, Yan Z, Lin Z. QTL Mapping for Fiber and Yield Traits in Upland Cotton under Multiple Environments. PloS one. 2015; 10(6):e0130742.

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DH962 x Ji Mian 5, RIL (2015)