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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | HAU2704 | HAU2704 | marker_locus | 34.34 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | HAU1484 | HAU1484 | marker_locus | 35.56 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | me_ACC/em_ATA | ACCATA-300 | marker_locus | 37.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | DPL0717 | DPL0717 | marker_locus | 38.77 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | CER0050 | MON_CER0050 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-D5397 | HAU-D5397-SSCP | marker_locus | 17.2 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU0087 | HAU087 | marker_locus | 21.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-D5527 | HAU-D5527 | marker_locus | 29.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | NAU5046 | NAU5046 | marker_locus | 37.66 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | TMB0206 | TMB0206 | marker_locus | 38.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-DJ-S429 | HAU-DJ-S429 | marker_locus | 47.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | me_AGG/em_CAA | AGGCAA-800 | marker_locus | 49.49 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-DJ-I106 | HAU-DJ-I106 | marker_locus | 53.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | NAU5099 | nau5099 | marker_locus | 55.53 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | CGR6410 | MON_CGR6410 | marker_locus | 63.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | JESPR0050 | JESPR50 | marker_locus | 65.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | BNL4030 | BNL4030 | marker_locus | 66.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-DJ-S231 | HAU-DJ-S231 | marker_locus | 72.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | HAU-J5732 | HAU-J5732 | marker_locus | 76.57 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | HAU-DJ-S165 | HAU-DJ-S165 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | HAU-D5235 | HAU-D5235 | marker_locus | 6.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | me_ACC/em_GGT | ACCGGT-500 | marker_locus | 10.23 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | me_CGA/em_GGT | CGAGGT-420 | marker_locus | 11.82 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | me_ATG/em_TTA | ATGTTA-500 | marker_locus | 13.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | Gh539 | Gh539 | marker_locus | 14.87 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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