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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | Gh525 | Gh525 | marker_locus | 96.52 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CIR0280 | CIR280 | marker_locus | 103.26 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CTT/em_AGA | CTTAGA-850 | marker_locus | 104.37 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | TMB0682 | TMB0682 | marker_locus | 106.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CGR6584 | MON_CGR6584 | marker_locus | 110.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU3314 | HAU3314 | marker_locus | 111.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | TMB2377 | TMB2377 | marker_locus | 118.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CTT/em_GAT | CTTGAT-330 | marker_locus | 125.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU-J5926 | HAU-J5926 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU-D5004 | HAU-D5004 | marker_locus | 5.02 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU-J5748 | HAU-J5748 | marker_locus | 5.03 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | BNL3359 | BNL3359 | marker_locus | 5.87 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | BNL0584 | BNL584 | marker_locus | 7.33 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU-D5038 | HAU-D5038 | marker_locus | 8.03 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU4595 | HAU4595 | marker_locus | 9.04 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | me_ATT/em_ACG | ATTACG-380 | marker_locus | 10.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU4814 | HAU4814 | marker_locus | 11.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | HAU-J5872 | HAU-J5872 | marker_locus | 14.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | BNL3436 | BNL3436 | marker_locus | 16.5 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | me_CAG/em_GAT | CAGGAT-450 | marker_locus | 21.12 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | me_CAG/em_TAT | CAGTAT-400 | marker_locus | 26.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | HAU-DJ-S149 | HAU-DJ-S149 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_GAG/em_GGG | GAGGGG-820 | marker_locus | 1.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | DC40117 | MON_DC40117 | marker_locus | 4.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | BNL3423 | BNL3423 | marker_locus | 8.78 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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