MCU-5 x Siokra 1-4, RIL (2015 SNP)

Map Overview


Name	MCU-5 x Siokra 1-4, RIL (2015 SNP)
Species	Gossypium hirsutum
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1244
Number of QTL	4
Number of linkage groups	53
Publication	[view all]
Contact	N/A

Publication


Year	Publications
2014	Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.

Map Loci

This map contains 1,244 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_30326055	Chr01_30326054	marker_locus	158.39 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5s14_1723184	scaffold_14_1723184	marker_locus	159.03 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_27968478	Chr01_27968477	marker_locus	161.91 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_29471540	Chr01_29471539	marker_locus	163.86 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5Chr01_30109614	Chr01_30109613	marker_locus	164.29 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_40365301	Chr01_40365300	marker_locus	165.81 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5Chr01_40594140	Chr01_40594139	marker_locus	166.9 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_41766858	Chr01_41766858	marker_locus	168.89 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_43426957	Chr01_43426957	marker_locus	172.77 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_44219928	Chr01_44219927	marker_locus	174.29 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_47104519	Chr01_47104518	marker_locus	187.41 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_47610867	Chr01_47610866	marker_locus	194.99 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_54129881	Chr01_54129880	marker_locus	209.9 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C16_LG27	CSIRO_D5chr01_53892803	Chr01_53892802	marker_locus	213.33 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_40255775	Chr03_40255775	marker_locus	0 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_6732382	Chr03_6732381	marker_locus	0 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_40707483	Chr03_40707482	marker_locus	3.1 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_42082063	Chr03_42082062	marker_locus	12.62 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_4841416	Chr03_4841415	marker_locus	14.36 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_4130002	Chr03_4130001	marker_locus	16.1 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_3891991	Chr03_3891990	marker_locus	18.29 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_41861075	Chr03_41861074	marker_locus	20.95 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_3526627	Chr03_3526626	marker_locus	30.15 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_43417341	Chr03_43417340	marker_locus	36.33 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C17_LG12	CSIRO_D5chr03_2557996	Chr03_2557996	marker_locus	40.18 cM

Page

First

...

Last

Map QTL

This map contains 4 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	qPOLLENCL.MS-chr04	QTL	0 cM	19.03 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C06_LG21	qDTL.MS-chr06	QTL	32.33 cM	33.83 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C11_LG43	qDTL.MS-chr11	QTL	0 cM	13.55 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C15_LG04	qLFSP.MS-chr15	QTL	0 cM	8.8 cM	-

Page

View Map

Search form

MCU-5 x Siokra 1-4, RIL (2015 SNP)