Handan-208 x Pima-90, F2:3 (2007)

Map Overview


Name	Handan-208 x Pima-90, F2:3 (2007)
Species	Gossypium hirsutum x barbadense
Software	MapMaker v3.0b
Population type	F2:3
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1028
Number of QTL	43
Number of linkage groups	26
Publication	[view all]
Contact	Zhang, Xian-Long

Contact

Name

Details

Zhang, Xian-Long

Description:	Genomics breeding
First name:	Xian-Long
Last name:	Zhang
Title:	Professor
Institution:	College of Plant Science and Technology, Huazhong Agricultural University
Address:	#1 Shizishan, Wuhan, Hubei 430070
Country:	China
Email:	xlzhang@mail.hzau.edu.cn
Phone:	+86 27 87280510
Fax:	+86 27 87280016
Last update:	12-Jun-2009

Publication


Year	Publications
2005	Lin Z, He D, Zhang X, Nie Y, Guo X, Feng C, Stewart J. Linkage map construction and mapping QTL for cotton fibre quality using SRAP, SSR and RAPD. Plant breeding. 2005; 124(2):180-187
2005	He D, Lin Z, Zhang X, Nie Y, Guo X, Feng C, Stewart J. Mapping QTLs of traits contributing to yield and analysis of genetic effects in tetraploid cotton. Euphytica : international journal of plant breeding. 2005; 144(1-2):141-149
2007	He D, Lin Z, Zhang X, Nie Y, Guo X, Zhang Y, Li W. QTL mapping for economic traits based on a dense genetic map of cotton with PCR-based markers using the interspecific cross of Gossypium hirsutum x Gossypium barbadense. Euphytica. 2007; 153(1-2):181-197

Map Loci

This map contains 1,028 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Handan-208 x Pima-90, F2:3 (2007).chr14	m7e11-360	m7e11-360	marker_locus	99.2 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	BNL1059	BNL1059a	marker_locus	101.7 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	S1173	S1173*	marker_locus	103.3 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m11e8-500	m11e8-500	marker_locus	104.4 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m4e9-420	m4e9-420	marker_locus	106.7 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m11e16-720	m11e16-720	marker_locus	106.7 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m14e12-800	m14e12-800	marker_locus	109 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m3e11-750	m3e11-750	marker_locus	112.6 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m6e3-620	m6e3-620	marker_locus	116.9 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m6e3-800	m6e3-800	marker_locus	120.4 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e2-580	m2e2-580	marker_locus	124.6 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m3e4-300	m3e4-300	marker_locus	127 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e8-850	m2e8-850	marker_locus	127.6 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e1-460	m2e1-460	marker_locus	129.4 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m7e14-660	m7e14-660	marker_locus	137.7 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e17-750	m2e17-750	marker_locus	138.4 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m4e5-450	m4e5-450	marker_locus	145.9 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e7-600	m2e7-600	marker_locus	151.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m9e7-250	m9e7-250	marker_locus	155.7 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	BNL0226	BNL226d	marker_locus	165.2 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	S0309	S309b*	marker_locus	169.9 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m8e8-850	m8e8-850	marker_locus	170.1 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m2e13-480	m2e13-480	marker_locus	171.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m13e11-780	m13e11-780	marker_locus	176.3 cM
Handan-208 x Pima-90, F2:3 (2007).chr14	m8e3-800	m8e3-800	marker_locus	186 cM

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Map QTL

This map contains 43 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Handan-208 x Pima-90, F2:3 (2007).chr14	qLY.HP-ch14	QTL	116.9 cM	120.4 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.1	QTL	99.2 cM	101.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.2	QTL	101.7 cM	106.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.3	QTL	106.7 cM	109 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr15	qLY.HP-ch15	QTL	21.6 cM	28.2 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr17	qLI.HP-ch17	QTL	216.6 cM	220.9 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr19/lgD08	qLI.HP-ch19	QTL	133.8 cM	135.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr21/lgD02	qSCY.HP-ch21	QTL	167.5 cM	179.1 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr22	qMIC.HP-ch22	QTL	0 cM	18.3 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qFS.HP-ch23	QTL	99.5 cM	101.8 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qLI.HP-ch23	QTL	32.4 cM	207 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qLY.HP-ch23	QTL	71.3 cM	74.5 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qSI.HP-ch23	QTL	32.4 cM	207 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr24/lgD03	qMIC.HP-ch24	QTL	80.9 cM	89.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr25	qLY.HP-ch25	QTL	173.2 cM	175.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr25	qSI.HP-ch25	QTL	261.3 cM	264.6 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr26	qLY.HP-ch26	QTL	71.7 cM	74.2 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr26	qSI.HP-ch26	QTL	71.7 cM	74.2 cM	-

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Handan-208 x Pima-90, F2:3 (2007)