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Marker Overview
Name | HAU1918 |
Genbank ID | DW228510 |
Type | SSR |
Species | Gossypium spp. |
Source Sequence | DW228510
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Source Type | EST |
Repeat Motif | (CACCAG)5 |
PCR Condition | Annealing temperature: 57.3 |
Primer 1 | HAU1918_F: TTCCTACTGCTCCTCCTCAG |
Primer 2 | HAU1918_R: ATATTTGTGAGGGGCAAATG |
Product Length | 213 |
Publication | [view all] |
Comment | Primer data obtained in 2012 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch16_Dt.07 | N/A | 35.19 | HAU1918a | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch23_Dt.09 | N/A | 67.91 | HAU1918b | View |
3 | Yumian-1 x T586, RIL (2015) | AD_ch23_Dt.09 | N/A | 26.9 | HAU1918 | View |
4 | Yumian-1 x 7235, RIL (2015) | AD_ch23_Dt.09 | N/A | 43 | HAU1918 | View |
5 | DH962 X Ji Mian 5, F2 (2015) | AD_ch09_At.09 | N/A | 52.96 | HAU1918 | View |
6 | DH962 X Ji Mian 5, F2 (2015) | AD_ch23_Dt.09 | N/A | 52.96 | HAU1918 | View |
7 | 0-153 x sGK9708, RIL (2016) | AD_ch23_Dt.09 | N/A | 90.9 | HAU1918 | View |
8 | DH962 x Ji Mian 5, RIL (2015) | AD_ch09_At.09 | N/A | 20.2 | HAU1918 | View |
9 | DH962 x Ji Mian 5, RIL (2015) | AD_ch23_Dt.09 | N/A | 20.2 | HAU1918 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch23_Dt.09 | N/A | 73.8 | HAU1918 | View |
11 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch23_Dt.09 | N/A | 79.8 | HAU1918 | View |
12 | CCRI-36 x G2005, RIL (2016) | AD_ch23_Dt.09 | N/A | 83.1 | HAU1918 | View |
13 | LMY22 x LY343, RIL (2020) | D09 | N/A | 86.97 | HAU1918 | View |
14 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch23_Dt.09 | N/A | 107.75 | HAU1918 | View |
15 | MGG-293-793, MAGIC (2018) | AD_ch22_Dt.04 | N/A | 116.3 | HAU1918b | View |
16 | MGG-293-793, MAGIC (2018) | AD_ch23_Dt.09 | N/A | 116.28 | HAU1918b | View |
Sequence
>HAU1918 ID=HAU1918; Name=HAU1918; organism=Gossypium spp.; type=genetic_marker; length=213bp TTCCTACTGCTCCTCCTCAGTCACCAGCACCAGCACCAGCACCAGCACCA CCTCCCGCAGCTCAAGCGACCCCACAAATACCACCGAATGATCCTGCAGC TCTACTAGCTGGTTTGCTGTCGTGAAAATGGAAGATTTGTTCAGTTTACA CTTAGAAACCTTGGTTTCTATACTCTGCCGGCCACCCATTTGGCATTTGC CCCTCACAAATAT
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