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Map Overview
Name | Yumian-1 x T586, RIL (2015) |
Species | Gossypium hirsutum
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Map type | genetic |
Population type | RIL |
Population size | 270 |
Genome group | AD |
Map unit | cM |
Maternal parent | Yumian-1 |
Paternal parent | Texas 586 |
Population size | 270 |
Number of loci | 1678 |
Number of QTL | 141 |
Number of linkage groups | 26 |
Publication | [view all] |
Contact | Zhang, Zheng-Sheng
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Map Loci
This map contains 1,678 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | HAU1619 | HAU1619 | marker_locus | 0 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | HAU1166 | HAU1166 | marker_locus | 0.7 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU1019 | NAU1019 | marker_locus | 2.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | HAU2102 | HAU2102 | marker_locus | 6.4 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU4044 | NAU4044 | marker_locus | 6.9 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NBRI_2086 | NBRI2086 | marker_locus | 8.1 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | MUCS0038 | MUCS038 | marker_locus | 9.2 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU2083 | NAU2083 | marker_locus | 10.9 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU2092 | NAU2092 | marker_locus | 11.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU2084 | NAU2084 | marker_locus | 12.2 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU4045 | nau4045 | marker_locus | 15.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | PGML3007 | PGML3007a | marker_locus | 20.1 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | CGR5995 | CGR5995a | marker_locus | 22 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NAU2725 | NAU2725 | marker_locus | 24 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | PGML1273 | PGML1273 | marker_locus | 27.7 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | HAU1001 | HAU1001 | marker_locus | 31.7 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | MUCS0416 | MUCS416 | marker_locus | 37.9 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | TMB0791 | TMB0791 | marker_locus | 42.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | DPL0513 | DPL0513 | marker_locus | 43.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | DPL0052 | DPL0052 | marker_locus | 44.9 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NBRI_gPD_72 | NBRI0213 | marker_locus | 45.6 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | NBRI_e1406 | NBRI1662 | marker_locus | 47.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | CIR0213 | CIR213 | marker_locus | 49 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | PGML2663 | PGML2663 | marker_locus | 50.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | HAU0030 | HAU0030b | marker_locus | 52 cM |
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Map QTL
This map contains 141 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr04 | qFALIN.YT-RIL_ch04.cq07 | QTL | 88 cM | 90.8 cM | 88.8 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr13 | qFALIN.YT-RIL_ch13.cq11 | QTL | 116.4 cM | 118.4 cM | 117.4 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr14 | qFALIN.YT-RIL_ch14.cq07 | QTL | 35.8 cM | 38.8 cM | 37.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr16 | qFALIN.YT-RIL_ch16.cq06 | QTL | 29.8 cM | 37.8 cM | 33.8 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr18 | qFALIN.YT-RIL_ch18.cq07 | QTL | 11.1 cM | 17.1 cM | 14.1 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr19 | qFALIN.YT-RIL_ch19.cq11 | QTL | 46.1 cM | 50.1 cM | 48.1 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr24 | qFALIN.YT-RIL_ch24.cq07 | QTL | 66.2 cM | 69.2 cM | 67.7 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr24 | qFALIN.YT-RIL_ch24.cq11 | QTL | 23.7 cM | 26.7 cM | 25.2 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr06 | qFAOLE.YT-RIL_ch06.cq11 | QTL | 12.2 cM | 16.2 cM | 14.2 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr07 | qFAOLE.YT-RIL_ch07.cq06 | QTL | 3.8 cM | 11.8 cM | 7.8 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr08 | qFAOLE.YT-RIL_ch08.cq06 | QTL | 0 cM | 5.4 cM | 2.7 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr10 | qFAOLE.YT-RIL_ch10.cq11 | QTL | 114.3 cM | 118.3 cM | 116.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr11 | qFAOLE.YT-RIL_ch11.cq07 | QTL | 113 cM | 116 cM | 114.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr12 | qFAOLE.YT-RIL_ch12.cq06 | QTL | 66 cM | 74 cM | 70 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr13 | qFAOLE.YT-RIL_ch13.cq11 | QTL | 116.4 cM | 118.4 cM | 117.4 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr18 | qFAOLE.YT-RIL_ch18.cq06 | QTL | 7.6 cM | 15.6 cM | 11.6 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr18 | qFAOLE.YT-RIL_ch18.cq07 | QTL | 7.6 cM | 15.6 cM | 11.6 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr19 | qFAOLE.YT-RIL_ch19.cq11 | QTL | 44.1 cM | 52.1 cM | 48.1 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr24 | qFAOLE.YT-RIL_ch24.cq11 | QTL | 2.6 cM | 8.6 cM | 5.6 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr01 | qFAPAL.YT-RIL_ch01.cq11 | QTL | 62.3 cM | 64.7 cM | 63.5 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr02 | qFAPAL.YT-RIL_ch02.cq07 | QTL | 4.3 cM | 8.3 cM | 6.3 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr06 | qFAPAL.YT-RIL_ch06.cq07 | QTL | 135.6 cM | 157.6 cM | 143.6 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr07 | qFAPAL.YT-RIL_ch07.cq06 | QTL | 124.4 cM | 129.4 cM | 126.9 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr10 | qFAPAL.YT-RIL_ch10.cq11 | QTL | 57.5 cM | 60.5 cM | 59 cM |
Yumian-1 x T586, RIL (2015).YT-RIL.15_chr12 | qFAPAL.YT-RIL_ch12.cq07 | QTL | 48.9 cM | 51.9 cM | 50.4 cM |
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Stock
Name | Type | Details |
Yumian-1 x T586, RIL | population | Alias: | YT-RIL | Description: | genetic mapping | Population size: | 270 | Secondary id: | cdbpop_000095 | Pedigree: | Yumian-1 / Texas 586 |
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Publication
Year | Publications |
2015 | Liu D, Liu F, Shan X, Zhang J, Tang S, Fang X, Liu X, Wang W, Tan Z, Teng Z, Zhang Z, Liu D. Construction of a high-density genetic map and lint percentage and cottonseed nutrient trait QTL identification in upland cotton (Gossypium hirsutum L.). Molecular genetics and genomics : MGG. 2015 Mar 22. 290:1683-1700. |
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