TX-1442

Germplasm Overview


Name	TX-1442
Alias	col.#2233 [view all 4]
GRIN ID	PI 438554
Type	Landrace
Species	Gossypium hirsutum
In Collection	[view all]
Description	Dooryard cotton, bush 2 m tall, Lint-White.
Origin Country	Belize
Origin Detail	Belize, Corozal
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 37]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
col.#2233
PI 438554
TEX 1442
TX 1442

Image


File Name	Legend	Dataset
TX-1442_CS17-0809_5D3_3094_LB.jpg	[TX-1442] leaf close up of the back surface, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_5D3_3095_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_IMG_3909_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_IMG_3910_L.jpg	[TX-1442] leaf, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_MG_1417_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 37 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0634
2	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	V-0634
3	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	V-0634
4	NCGC germplasm evaluation, T12	stem color	sun red	MX_CLM_TCM_2012	V-0634
5	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012	V-0634
6	NCGC germplasm evaluation, T12	stigma exsertion	normal	MX_CLM_TCM_2012	V-0634
7	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012	V-0634
8	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012	V-0634
9	NCGC germplasm evaluation, T12	plant height (m)	1.68	MX_CLM_TCM_2012	V-0634
10	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012	V-0634
11	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	V-0634
12	NCGC germplasm evaluation, T12	productiveness	37-48 per plant	MX_CLM_TCM_2012	V-0634

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	139\|139	bnl2443_139; bnl2443_139
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	156\|156	bnl1495_156; bnl1495_156
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	191\|191	bnl2495_191; bnl2495_191
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	107\|107	gh283_107; gh283_107
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	160\|160	bnl3992_160; bnl3992_160
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|132\|136	bnl1531_116; bnl1531_121; bnl1531_132; bnl1531_136
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|194	bnl3644_185; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|178	bnl3371_168; bnl3371_178
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	129\|129	nau2140_129; nau2140_129
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|176	dpl0135_156; dpl0135_176
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|215	bnl0256_182; bnl0256_215
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	176\|178	tmb0043_176; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	x\|x	bnl2960_x; bnl2960_x
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	183\|203	tmb0836_183; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	210\|210	bnl3441_210; bnl3441_210
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	211\|211	bnl3580_211; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	190\|190	bnl1231_190; bnl1231_190
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|198	bnl3594_182; bnl3594_198
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	184\|184	tmb1421_184; tmb1421_184
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	178\|178	bnl4061_178; bnl4061_178
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	352\|352	bnl3650_352; bnl3650_352
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	172\|180	bnl3474_172; bnl3474_180
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	A
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	A
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	G
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	T

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1442
GRIN	PI 438554

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 438554	GRIN:
NCGC Cotton Race Collection (USA)	TX-1442

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