TX-1442

Germplasm Overview


Name	TX-1442
Alias	col.#2233 [view all 4]
GRIN ID	PI 438554
Type	Landrace
Species	Gossypium hirsutum
In Collection	[view all]
Description	Dooryard cotton, bush 2 m tall, Lint-White.
Origin Country	Belize
Origin Detail	Belize, Corozal
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 37]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias

Image


File Name	Legend	Dataset
TX-1442_CS17-0809_5D3_3094_LB.jpg	[TX-1442] leaf close up of the back surface, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_5D3_3095_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_IMG_3909_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_IMG_3910_L.jpg	[TX-1442] leaf, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)
TX-1442_CS17-0809_MG_1417_ST.jpg	[TX-1442] stem, College Station Plot-0809, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 37 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0634
2	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	V-0634
3	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	V-0634
4	NCGC germplasm evaluation, T12	stem color	sun red	MX_CLM_TCM_2012	V-0634
5	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012	V-0634
6	NCGC germplasm evaluation, T12	stigma exsertion	normal	MX_CLM_TCM_2012	V-0634
7	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012	V-0634
8	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012	V-0634
9	NCGC germplasm evaluation, T12	plant height (m)	1.68	MX_CLM_TCM_2012	V-0634
10	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012	V-0634
11	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	V-0634
12	NCGC germplasm evaluation, T12	productiveness	37-48 per plant	MX_CLM_TCM_2012	V-0634

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	178\|178	bnl4061_178; bnl4061_178
2	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	352\|352	bnl3650_352; bnl3650_352
3	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	172\|180	bnl3474_172; bnl3474_180
4	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_002727	C/T	C
2	TAMU_SNP63K_genotype	UCD_Gh_M_002736	G/A	G
3	TAMU_SNP63K_genotype	UCD_Gh_M_002750	C/T	C
4	TAMU_SNP63K_genotype	UCD_Gh_M_002766	T/G	G
5	TAMU_SNP63K_genotype	UCD_Gh_M_002781	A/G	A
6	TAMU_SNP63K_genotype	UCD_Gh_M_002835	C/T	Y
7	TAMU_SNP63K_genotype	UCD_Gh_M_002853	C/T	T
8	TAMU_SNP63K_genotype	UCD_Gh_M_002948	G/T	G
9	TAMU_SNP63K_genotype	UCD_Gh_M_002959	A/G	G
10	TAMU_SNP63K_genotype	UCD_Gh_M_002966	C/A	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_002967	A/G	A
12	TAMU_SNP63K_genotype	UCD_Gh_M_002990	A/G	A
13	TAMU_SNP63K_genotype	UCD_Gh_M_002994	G/A	A
14	TAMU_SNP63K_genotype	UCD_Gh_M_003001	C/T	T
15	TAMU_SNP63K_genotype	UCD_Gh_M_003005	A/G	A
16	TAMU_SNP63K_genotype	UCD_Gh_M_003056	A/G	G
17	TAMU_SNP63K_genotype	UCD_Gh_M_003062	C/A	A
18	TAMU_SNP63K_genotype	UCD_Gh_M_003147	A/C	A
19	TAMU_SNP63K_genotype	UCD_Gh_M_003148	C/T	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_003168	G/A	G
21	TAMU_SNP63K_genotype	UCD_Gh_M_003169	C/T	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_003176	G/T	G
23	TAMU_SNP63K_genotype	UCD_Gh_M_003204	T/C	T
24	TAMU_SNP63K_genotype	UCD_Gh_M_003288	T/C	C
25	TAMU_SNP63K_genotype	UCD_Gh_M_003305	T/C	T

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1442
GRIN	PI 438554

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 438554	GRIN:
NCGC Cotton Race Collection (USA)	TX-1442

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