2012 ICGI Research Conference Proceedings

A comparison of candidate gene-based and genotyping-by-sequencing (GBS) approaches to trait mapping in Gossypium barbadense L. oral Logan-Young, Carla Jo Yu, John Z.; Percy, Richard G. ; Pepper, Alan E.
A genome-wide comparison of microRNAs from different tissues of diploid and tetraploid cotton oral Mansoor, Shahid ; Guo, Hui Mansoor, Shahid ; Guo, Hui
Analysis of Cotton Leaf Small RNA Libraries During Heat Stress in Thermotolerant Germplasm poster Hu, Hongtao Locy, Robert
An improved mitotic chromosome spreading technique compatible for FISH and GISH in cotton poster Andres, Ryan kuraparthy, vasu
Application of Index Selection in Upland Cotton Breeding Program Using QuLine Simulation N/A Li, Weihua; Ye, Guoyou Li, Weihua
Assessing Genetic Diversity in F2 derived population of Gossypium arboreum cotton using Genomic and EST-derived microsatellites poster Bishnoi, Kiran Salar, Raj Kumar; Verma, Surender Kumar
Association Mapping for Drought Tolerance in Cotton (Gossypium hirsutum L.) oral Muhammad, Saeed Muhammad, Saeed
A Systematic Approach to the Functional Analysis of Cotton Genes oral Guan, Xueying Chen, Z. Jeffrey
BAC derived new SSRs for use in cotton (Gossypium spp) improvement oral Tabbasam, Nabila Tabbasam, Nabila; Tabbasam, Nabila
Biochemical criteria of active adaptations poster Shadmanov, Rustam Shadmanova, Anna; Saranskaya, Ludmila
Characterization of cellulose synthase catalytic subunit genes involved in secondary wall biosynthesis in Gossypium hirsutum L. oral Kim, Hee Jin Kim, Hee Jin
Characterization of upland cotton gene GhLag1 encoding ceramide synthase oral Qin, Yong-Mei Qin, Yong-Mei
Chromosome Substitution Lines:  An Effective Way To Introgress Useful Genes From Other Allotetraploid Species Into Upland Cotton, Gossypium  hirsutum L. oral Saha, Sukumar Saha, Sukumar
Comparative Transcriptomic Analysis of Roots of Contrasting Gossypium herbaceum Genotypes Revealing Adaptation to Drought oral Ranjan, Alok Ranjan, Alok
Comparison and Evaluation of Cotton SNPs Developed by Transcriptome, Genome Reduction on Restriction Site Conservation and RAD-based Sequencing oral Ashrafi, Hamid Ashrafi, Hamid; Ashrafi, Hamid
Confirmation of Gossypium hirsutum Chromosome Substitution Lines using SSR markers poster Saha, Sukumar Saha, Sukumar
Construction of Genetic Linkage Map and QTL Analysis of Yield and Fiber Quality in Interspecific Population of Cotton between G. hirsutum L. and G. barbadense L. oral Yuan, Youlu Yuan, Youlu
Construction of Genetic Map and QTL Mapping of agronomy traits in Upland Cotton oral Zhang, Zhengsheng; Zhang , Jian;  Liu, Dajun; Teng, Zhonghua; Tang, Shiyi; Liu, Fang; Tan, Zhaoyun; Liu, Dexin; Wang, Shunfeng; Li, Li; Li, Ling; Lin, Gang; Ni, Huijuan; Min, Feng; Wang, Wei; Zheng, Jing; Hu, Meichun; Wang, Qun Zhang, Zhengsheng
Construction of linkage map based on SSR markers using an interspecific F2 population of cotton (Gossypium hirsutum L ×Gossypium tomentosum Nutt ex Seem) poster Hou, Meiying; Hou, Meiying Zhou, Baoliang; Zhou, Baoliang
Construction of transcriptional map of fiber development by amplifying cDNA using EST-SSRs in cotton poster Liu, Chuanxiang Lin, Zhongxu
Cotton fleahopper (Pseudatomoscelis seriatus) (Hemiptera:  Miridae) damage in Gossypium hirsutum:  breeding efforts towards increased resistance poster Hague, Steve Hague, Steve
CottonGen: an Integrated Genomics, Genetics and Breeding Database for the Cotton Research Community oral Yu, Jing Yu, Jing
Cotton Genomics and Transgenomics in Uzbekistan oral Abdurakhmonov, Ibrokhim Abdurakhmonov, Ibrokhim
Cotton GhCKI regulates anther abortion by delaying tapetum PCD via the GLU-ABA-ROS signalling pathway oral Zhang, Xianlong Zhang, Xianlong
Cotton PRP5 Gene Encoding a Proline-rich Protein Is Involved in Fiber Development oral Li, Xue-Bao Li, Xue-Bao
Data Search and Visualization Tools at the Comparative Evolutionary Genomics of Cotton Web Resource poster Gingle, Alan; Gingle, Alan Paterson, Andrew; Udall, Joshua; Wendel, Jonathan; Paterson, Andrew; Udall, Joshua; Wendel, Jonathan
De novo SNP Discovery and Development of an Interspecific Cotton Genome Map Using a Simplified Genotyping-by-sequencing (GBS) Approach oral Verma, Surender Pepper, Alan; Pepper, Alan; Yu, John; Yu, John
Development of a set of highly informative microsatellite markers for genetic analysis and molecular breeding of elite Upland cotton (Gossypium hirsutum L.) oral Fang, David Fang, David
Differentially Expressed fibre related genes in diploid Cotton and their functional validation N/A Katageri, Ishwarappa  
Discovery and Identification of a Novel Ligon lintless-like Mutant (Lix) Similar to the Ligon lintless (Li1) in Allotetraploid Cotton N/A Cai, Caiping  
Evolution of duplicated pathways and networks following genome doubling oral Grover, Corrinne E Grover, Corrinne E
Evolution of Indigenous genetically modified, tolerant to Cotton Leaf Curl Virus, high yielding equipped with desirable fibre traits upland cotton variety Bt.CIM-598 oral Hussain, Khadim Hussain, Khadim
Exploring the Genetics of Adaptive Traits in Cotton with a Next-Generation Platform oral Gore, Michael Gore, Michael
Functional analysis of GbML1 during cotton fiber iniation oral zuo, kaijing  
Functional analysis of genes that regulate stress responses in cotton oral Allen, Randy Allen, Randy
GbTCP, a cotton TCP transcription factor, confers fiber elongation and root hair development by a complex regulating system oral Zhang, Xianlong Zhang, Xianlong
Geminivirus-mediated delivery of florigen to ancestral cotton uncouples flowering from photoperiod and promotes determinate growth poster Ayre, Brian Ayre, Brian
Gene-based SNP marker development using targeted re-sequencing in cotton (Gossypium spp) poster Buyyarapu, Ramesh Buyyarapu, Ramesh
Genes cloning and their identification of salinity stress on cotton germplasm poster Ye, Wuwei Ye, Wuwei
Genes, jeans, and genomes: exploring the mysteries of polyploidy in cotton oral Wendel, Jonathan  
Genetic Dissection of Heterosis for Yield and Yield-Component Traits in an Elite Cotton Hybrid Grown in Second-Generation oral Hu, Yan Zhang , Tianzhen
Genetic Mapping and Marker-Assisted Selection for Improving Drought Resistance in Cotton oral Saranga, Yehoshua Saranga, Yehoshua
Genetic variability for number of elongating fibre cells in cotton (G. hirsutum, L.) poster Katageri, Ishwarappa  
Genome Resequencing of Select Cotton Diploid Accessions oral Udall, Joshua A. Udall, Joshua A.
Genome-wide sequencing and analysis reveals the complexity of Gossypium raimondii ribogenome oral Li, Qin Zhu, Yu-Xian
Global alteration of microRNAs and transposon-derived small RNAs in cotton (Gossypium hirsutum) during cotton leafroll dwarf polerovirus (CLRDV) infection oral Vaslin, Maite F. S. Vaslin, Maite F. S.; Vaslin, Maite F. S.
Identification and Comparison of Conserved and Novel Mature miRNAs, miRNA Precursors, and miRNA*s in the Genus Gossypium oral Locy, Robert Locy, Robert ; Locy, Robert
Identification of quantitative trait loci for fiber quality properties on homologous chromosomes 13 and 18 of Gossypium klotzschianum oral Xu, Peng Shen, Xinlian
Identifying CLCV Tolerant Genes in Cotton through Genomics Approaches oral Rashid B, Aftab B, Shahid MN, Hassan, S, Saddique S, Husnain T. rashid, bushra
Increased endogenous brassinosteroid level promotes fiber cell elongation by over-expressing GhDWF4 gene in transgenic cotton (Gossypium hirsutum L.) oral Luo, Ming; Hu, Mingyu; Asami, Tadao; Nakano, Takeshi; Fujioka, Shozo ; Xiao, Yuehua Pei, Yan
Integrated analysis of genetic and expression QTL suggested that differential gene regulation causes a great difference in fibre quality between Gossypium hirsutum and G. barbadense oral Guo, Wangzhen Zhang, Tianzhen
Integrated comparison of fiber developmental processes in G. hirsutum and G. barbadense oral Haigler, Candace H. Haigler, Candace H.
Integrated genomics and metabolomics analysis provides new insights into the cotton fiber elongation process in Ligon lintless-2 mutant oral Naoumkina, Marina Naoumkina, Marina
Introgression of the Ultra-Low Gossypol Cottonseed Trait Into Elite Cotton Germplasm oral Hague, Steve Hague, Steve
Isolation and Functional Analysis of GarCIPK Gene of Gossypium aridum poster Shen, Xinlian  
Lessons learned and future strategies for combating cotton leaf curl disease oral Rahman, Mehboob-ur- Rahman, Mehboob-ur-
Localization of Allotetraploid Gossypium SNPs Using Physical Mapping Resources oral Hulse, Amanda M. Hulse, Amanda M.
Mapping cotton fiber quality trait QTLs using GWAS oral Fang, David Fang, David
Mapping quantitative trait loci associated with cotton leaf curl virus (clcuv) and flower characteristics in cotton (Gossypium l.) using microsatellite markers poster Muhammad, Khan Muhammad, Khan
Micro RNAs as reference genes for quantitative gene expression studies using RT-qPCR in cotton poster Vaslin, Maite Vaslin, Maite
Molecular characterization of the US Cotton (Gossypium spp.) Germplasm Collection oral Hinze, Lori Percy, Richard
Molecular marker redundancy check and construction of a high density genetic map of tetraploid cotton oral Lacape, Jean-Marc Lacape, Jean-Marc; Fang, David; Blenda, Anna
New Methods of Mapping QTX-based on Omics Data and Their Applications in Crop Breeding oral   Zhu, Jun
Over-expressed alternative oxidase gene efficacy on fiber growth and maturation in cotton poster Pham, Hanh Wright, Robert
Phylogenetic studies of six cotton cultivars by using RAPD markers oral Halepoto, Abdul Rehman; Halepoto, Abdul Rehman Halepoto, Abdul Rehman
QTL analysis for gossypol and protein contents in upland cottonseeds with two different genetic systems across environments oral Zhu, Shuiji Zhu, Shuiji
Reconstruction of the Phylogenetic Tree for Gossypium L. and Inference on the Genomic Origins of the AD-genome Species by Genome-wide Analysis oral Zhang, Hong-Bin Zhang, Hong-Bin
Re-establishing the Molecular Basis of Genetics and Biology: Copy Number Variation and Correlation of Genome-constituent Element Families in Gossypium L. oral Zhang, Meiping Zhang, Hong-Bin
Root-knot nematode resistance in Upland cotton oral Chee, Peng Chee, Peng
Search of drought tolerant genes/ transcription factor from Gossypium arboreum and its transformation in Gossypium hirusutum oral Husnain, Tayyab Husnain, Tayyab
Selective fertilization in interspecific crosses among tetraploid Gossypium native or naturalized from Brazil poster Barroso, Paulo A. V. Barroso, Paulo A. V.
Sequence Analysis of DET2 Gene in Different Gossypium Species poster Ni, Wanchao  
Small RNA Analysis of Resistant and Susceptible Cotton Roots Infested with Reniform Nematodes N/A Li, Ruijuan; Li, Ruijuan Locy, Robert
Small RNA biogenesis regulatory network evolution in Gossypium raimondii oral Romanel, Elisson Vaslin, Maite
Study on Genetic Diversity and Population Structure of Elite Cotton Germplasm in China poster Wang, Hongmei Wang, Hongmei
Study on molecular mechanism of a new virescent mutant (vsp) in short season cotton (Gossypium hirsutum L.) oral song, meizhen; fan, shuli; pang, chaoyou; li, haijing yu, shuxun
Sub-genomic level sequence analysis of the aquaporin multi-gene family in cotton oral Park, Wonkeun Campbell, B. Todd
Technological Improvements in Management of the U.S. Cotton Germplasm Collection poster Frelichowski, James Frelichowski, James
The Gene Families RPW8, HSP20 and FMO in Gossypium raimondii oral Vieira Hoffmann, Lucia; Vieira Hoffmann, Lucia Vieira Hoffmann, Lucia
The Genome of a Diploid Cotton Gossypium raimondii oral Yu, Shuxun Yu, Shuxun
The identification of the cotton monosomics lines of Uzbek cytogenetic collection using a tester-set of translocation lines poster Sanamyan, Marina Sanamyan, Marina; Abdurakhmonov, Ibrokhim
The Innovation and Utilization of Salinity-Tolerant Cotton Germplasm poster    
The structure of genetic diversity in cotton as revealed by microsatellite markers poster Tyagi, Priyanka Tyagi, Priyanka
Toward Cloning of All Major Genes Significant for Cotton Fiber Yield and Quality, and Deciphering of the Molecular Basis of Cotton Fiber Yield and Quality oral Zhang, Hong-Bin Zhang, Hong-Bin
Toward Development of Robust Integrated Physical and Genetic Maps for Individual Chromosomes of Upland Cotton for Accurately Sequencing Its Genome oral Zhang, Hong-Bin Zhang, Hong-Bin
Toward to understanding of yield and fiber quality inheritance of tetraploid cottons based on CSILs analysis oral Zhang, Tianzhen Zhang, Tianzhen
Transcriptional and Biochemical Analyses Reveal a Detailed Proanthocyanidin Pathway in Brown Cotton Fiber poster Xiao, Yue-Hua Pei, Yan
Transcriptome analysis of extant cotton progenitors and identification of genome-specific-single nucleotide polymorphism (GNP) for allelic discrimination in allotetraploid cotton oral Nah, Gyoungju Chen, Z. Jeffrey
Transcriptomic approaches for the identification of drought-responsive genes in cotton oral Campbell, B. Todd Campbell, B. Todd
Virus-induced gene silencing to probe the function of genes expressed in cotton fiber oral Tuttle, John Tuttle, John