TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c06	DPL0238	DPL0238	marker_locus	90.52 cM
TM-1 x 3-79, RIL (2012).c06	Gh441	GH441	marker_locus	94.43 cM
TM-1 x 3-79, RIL (2012).c06	Gh039	Gh039	marker_locus	100.25 cM
TM-1 x 3-79, RIL (2012).c06	BNL2569	BNL2569	marker_locus	106.67 cM
TM-1 x 3-79, RIL (2012).c06	DPL0588	DPL0588	marker_locus	107.97 cM
TM-1 x 3-79, RIL (2012).c06	TMB1538	TMB1538	marker_locus	109.92 cM
TM-1 x 3-79, RIL (2012).c06	CIR0203	CIR203	marker_locus	110.27 cM
TM-1 x 3-79, RIL (2012).c06	TMB0853	TMB0853	marker_locus	110.28 cM
TM-1 x 3-79, RIL (2012).c06	TMB0154	TMB0154	marker_locus	111.26 cM
TM-1 x 3-79, RIL (2012).c06	Gh032	Gh032	marker_locus	113.53 cM
TM-1 x 3-79, RIL (2012).c06	UCD_cot10097_176	UCcot10097_176	marker_locus	117.98 cM
TM-1 x 3-79, RIL (2012).c06	CIR0017	CIR017	marker_locus	119.87 cM
TM-1 x 3-79, RIL (2012).c06	BNL0827	BNL0827a	marker_locus	122.63 cM
TM-1 x 3-79, RIL (2012).c06	BNL0584	BNL0584a	marker_locus	123.04 cM
TM-1 x 3-79, RIL (2012).c06	CIR0267	CIR267	marker_locus	123.99 cM
TM-1 x 3-79, RIL (2012).c06	STV0106	STV106	marker_locus	124.53 cM
TM-1 x 3-79, RIL (2012).c06	DPL0328	DPL0328	marker_locus	124.62 cM
TM-1 x 3-79, RIL (2012).c06	BNL3359	BNL3359	marker_locus	125.4 cM
TM-1 x 3-79, RIL (2012).c06	UCD_cg10870_337	UCcg10870_337	marker_locus	128.28 cM
TM-1 x 3-79, RIL (2012).c06	UCD_cg10870_207	UCcg10870_207	marker_locus	129.06 cM
TM-1 x 3-79, RIL (2012).c06	BNL1076	BNL1076	marker_locus	130.2 cM
TM-1 x 3-79, RIL (2012).c06	JESPR0119	JESPR119	marker_locus	130.99 cM
TM-1 x 3-79, RIL (2012).c07	DOW007	DOW007	marker_locus	0 cM
TM-1 x 3-79, RIL (2012).c07	MUSS0013	MUSS013	marker_locus	6.55 cM
TM-1 x 3-79, RIL (2012).c07	UCD_cg10428_166	UCcg10428_166	marker_locus	6.93 cM

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TM-1 x 3-79, RIL (2012)