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Marker Overview
| Name | TMB0154 |
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| Alias | TMD02
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| Genbank ID | BV679301 |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | TM-1 |
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| Source Sequence | BV679301.1
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| Source Type | genomic |
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| Repeat Motif | (CA)18 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | TMB0154_F: TGTCAAGTTCAAGGGCACAA |
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| Primer 2 | TMB0154_R: TCCAAGTCCCACCATGAGTT |
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| Product Length | 260 |
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| Contact | Yu, John Z. (Zhi-Hong)
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| Comment | Primer data obtained in 2005-10 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
| Stock Name | Type |
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| TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch06_At.06 | N/A | 138.3 | TMD02 | View |
| 2 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A06 | N/A | 166.1 | TMD02 | View |
| 3 | Emian-22 x 3-79, BC1 (2011) | AD_ch06_At.06 | N/A | 33.86 | TMB0154 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch06_At.06 | N/A | 8 | TMB0154 | View |
| 5 | TM-1 x 3-79, RIL (2012) | AD_ch06_At.06 | N/A | 111.26 | TMB0154 | View |
| 6 | Yumian-1 x T586, RIL (2006) | AD_ch06_At.06 | N/A | 44.6 | TMB0154 | View |
| 7 | Yumian-1 x T586, RIL (2015) | AD_ch06_At.06 | N/A | 14.2 | TMB0154 | View |
| 8 | TM-1 x 3-79, RIL (2014) | AD_ch06_At.06 | N/A | 111.3 | TMB0154 | View |
| 9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch06_At.06 | N/A | 136 | TMB0154 | View |
| 10 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch06_At.06 | N/A | 173.2 | TMHD02 | View |
| 11 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch06_At.06 | N/A | 117.8 | TMHD02 | View |
| 12 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A03 | N/A | 81 | TND02 | View |
| 13 | TM-1 x Hai-7124, BC1 (2007) | AD_ch06_At.06 | N/A | 48.6 | TMD02-260 | View |
| 14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch06_At.06 | N/A | 45.9 | TMD02-260 | View |
| 15 | TM-1 x Hai-7124, BC1 (2008) | AD_ch06_At.06 | N/A | 109.49 | TMD02-260 | View |
| 16 | TM-1 x Hai-7124, BC1 (2012) | AD_ch06_At.06 | N/A | 105.8 | TMD02-260 | View |
| 17 | Yumian-1 x T586, RIL (2009) | AD_ch06_At.06 | N/A | 10 | TMB0154/290t(C6) | View |
| 18 | TM-1 x 3-79, RIL (2012.v3) | AD_ch06_At.06 | N/A | 111.26 | TMB0154 | View |
Sequence
>TMB0154 ID=TMB0154; Name=TMB0154; organism=Gossypium hirsutum; type=genetic_marker; length=260bp
TGTCAAGTTCAAGGGCACAAAATTATATTAACTCTTTTCTTTAAAATATC
CATTACTCTTCTCAAGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGAAAGTTTATAAGTACAGTACACATACATGTCTAAGTAACCATTTGG
TGTAGAAGCAAACTATTACAACACAAACTATAAATTGCATCAATCCAAAC
TATGAACTAACTAATTGAACTAAAATTCATACATGGAAATAACTCATGGT
GGGACTTGGA
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