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Marker Overview
Name | CIR0267 |
Alias | CIR267
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Genbank ID | AJ567211 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567211
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Source Type | genomic |
Repeat Motif | (AC)8(N)2(AC)4 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CIR267_F: GCAAGTTTGAATGGTTG |
Primer 2 | CIR267_R: CTTGGTTCTGCTTGGA |
Product Length | 96 |
Polymorphism | P_ CIR0267 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch06_At.06 | N/A | 163.1 | CIR267a | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch06_At.06 | N/A | 9.7 | CIR267a | View |
3 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch25_Dt.06 | N/A | 14.7 | CIR267b | View |
4 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch25_Dt.06 | N/A | 14 | CIR267b | View |
5 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch06_At.06 | N/A | 6.54 | CIR267 | View |
6 | TM-1 x 3-79, RIL (2012) | AD_ch06_At.06 | N/A | 123.99 | CIR267 | View |
7 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch25_Dt.06 | N/A | 8.74 | CIR267 | View |
8 | TM-1 x 3-79, RIL (2014) | AD_ch06_At.06 | N/A | 124 | CIR267 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch25_Dt.06 | N/A | 11 | cir0267 | View |
10 | AD-genome wide Reference Map (2009) | AD_ch06_At.06 | N/A | 5 | cir0267 | View |
11 | TM-1 x 3-79, RIL (2012.v3) | AD_ch06_At.06 | N/A | 123.99 | CIR267 | View |
12 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch06_At.06 | N/A | 57.3 | CIR267 | View |
Sequence
>CIR0267 ID=CIR0267; Name=CIR0267; organism=Gossypium hirsutum; type=genetic_marker; length=96bp GCAAGTTTGAATGGTTGAAGATAAGCAAATACACACACACACACACAAAC ACACACATATACAGCCCTGGGAGATTGATATCCAAGCAGAACCAAG
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