CIR0267, CIR0267 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0267
AliasCIR267
Genbank IDAJ567211
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567211
Source Typegenomic
Repeat Motif(AC)8(N)2(AC)4
PCR ConditionAnnealing temperature: 55
Primer 1CIR267_F: GCAAGTTTGAATGGTTG
Primer 2CIR267_R: CTTGGTTCTGCTTGGA
Product Length96
PolymorphismP_ CIR0267
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567211
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567211AJ567211Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch06_At.06N/A163.1CIR267aView
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch06_At.06N/A9.7CIR267aView
3CCRI-36 x Hai-7124, F2 (2007)AD_ch25_Dt.06N/A14.7CIR267bView
4Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch25_Dt.06N/A14CIR267bView
5Guazuncho-2 x VH8-4602, consensus (2009)AD_ch06_At.06N/A6.54CIR267View
6TM-1 x 3-79, RIL (2012)AD_ch06_At.06N/A123.99CIR267View
7Guazuncho-2 x VH8-4602, consensus (2009)AD_ch25_Dt.06N/A8.74CIR267View
8TM-1 x 3-79, RIL (2014)AD_ch06_At.06N/A124CIR267View
9AD-genome wide Reference Map (2009)AD_ch25_Dt.06N/A11cir0267View
10AD-genome wide Reference Map (2009)AD_ch06_At.06N/A5cir0267View
11TM-1 x 3-79, RIL (2012.v3)AD_ch06_At.06N/A123.99CIR267View
12PD 94042 x (AD)4-08, F2 (2016)AD_ch06_At.06N/A57.3CIR267View
Sequence
>CIR0267 ID=CIR0267; Name=CIR0267; organism=Gossypium hirsutum; type=genetic_marker; length=96bp
GCAAGTTTGAATGGTTGAAGATAAGCAAATACACACACACACACACAAAC
ACACACATATACAGCCCTGGGAGATTGATATCCAAGCAGAACCAAG