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Map Overview
Name | Guazuncho-2 x VH8-4602, RIL (2009) |
Species | Gossypium hirsutum x barbadense
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Population type | RIL |
Source url | http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp |
Genome group | AD |
Map type | genetic |
Map unit | cM |
Maternal parent | Guazuncho-2 |
Paternal parent | VH8-4602 |
Number of loci | 800 |
Number of QTL | 47 |
Number of linkage groups | 26 |
Publication | [view all] |
Contact | TropGene
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Stock
Name | Type | Details |
Guazuncho-2 x VH8-4602, RIL | population | Alias: | GV-RIL | Description: | genetic mapping | Secondary id: | cdbpop_000020 | Pedigree: | Guazuncho-2 / VH8-4602 |
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Publication
Year | Publications |
2009 | Lacape J, Jacobs J, Arioli T, Derijcker R, Forestier-Chiron N, Llewellyn D, Jean J, Thomas E, Viot C. A new interspecific, Gossypium hirsutum x G. barbadense, RIL population: towards a unified consensus linkage map of tetraploid cotton. Theoretical and applied genetics TAG. 2009; 119(2):281-292. |
Map Loci
This map contains 800 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Guazuncho-2 x VH8-4602, RIL (2009).ch07 | CIR0412 | CIR412 | marker_locus | 50.43 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch07 | NAU1043 | NAU1043 | marker_locus | 56.78 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch07 | E32M49-M245.0 | E32M49-M245.0 | marker_locus | 59.25 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch07 | CIR0320 | CIR320 | marker_locus | 74.48 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | CIR0244 | CIR244 | marker_locus | 0 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | NAU0920 | NAU0920 | marker_locus | 0.13 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | JESPR0232 | JESPR232 | marker_locus | 3.78 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E42M48-M236.6 | E42M48-M236.6 | marker_locus | 11.25 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | NAU2407 | NAU2407 | marker_locus | 13.34 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | CIR0376 | CIR376 | marker_locus | 15.39 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E32M50-M295.2 | E32M50-M295.2 | marker_locus | 17.09 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E41M47-M140.1 | E41M47-M140.1 | marker_locus | 24.66 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E31M48-M172.6 | E31M48-M172.6 | marker_locus | 26.47 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | MUSS0250 | MUSS250 | marker_locus | 28.36 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | NAU2439 | NAU2439 | marker_locus | 28.38 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E35M52-M152.0 | E35M52-M152.0 | marker_locus | 30.98 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | CIR0119 | CIR119 | marker_locus | 33.07 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | BNL3627 | BNL3627 | marker_locus | 36.06 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E36M47-M173.9 | E36M47-M173.9 | marker_locus | 43.67 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E32M49-M130.8 | E32M49-M130.8 | marker_locus | 45.36 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | MUSB0818 | MUSB0818 | marker_locus | 46.18 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | MUSB0958 | MUSB0958 | marker_locus | 46.62 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E35M54-M402.8 | E35M54-M402.8 | marker_locus | 46.83 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E42M48-M206.2 | E42M48-M206.2 | marker_locus | 47.32 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch08/lgA02 | E32M51-M345.6 | E32M51-M345.6 | marker_locus | 47.74 cM |
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Map QTL
This map contains 47 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qFECONC.GV-RIL_ch14 | QTL | 83 cM | 95.4 cM | 88 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qZNCONC.GV-RIL_ch14 | QTL | 81.4 cM | 94.3 cM | 88 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qBCONC.GV-RIL_ch14 | QTL | 73 cM | 81.4 cM | 76.1 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qKCONC.GV-RIL_ch22 | QTL | 23 cM | 38.4 cM | 31.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qMGCONC.GV-RIL_ch22 | QTL | 0 cM | 4.2 cM | 0 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qSCONC.GV-RIL_ch22 | QTL | 40.2 cM | 52.5 cM | 43.4 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qFECONC.GV-RIL_ch22 | QTL | 46.2 cM | 57.1 cM | 49.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch19/lgD08 | qBCONC.GV-RIL_ch19 | QTL | 44.1 cM | 46.2 cM | 44.9 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch25 | qBCONC.GV-RIL_ch25 | QTL | 0.3 cM | 16.3 cM | 10.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch24/lgD03 | qCACONC.GV-RIL_ch24 | QTL | 25.4 cM | 36.8 cM | 29.8 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch24/lgD03 | qNACONC.GV-RIL_ch24 | QTL | 41.4 cM | 50.4 cM | 45.8 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch23 | qMNCONC.GV-RIL_ch23 | QTL | 28.4 cM | 35.6 cM | 32 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch20 | qMNCONC.GV-RIL_ch20 | QTL | 31 cM | 41.2 cM | 36.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch21/lgD02 | qPCONC.GV-RIL_ch21 | QTL | 32.9 cM | 46.4 cM | 36.9 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch21/lgD02 | qMNCONC.GV-RIL_ch21 | QTL | 110.5 cM | 129.9 cM | 121.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch26 | qZNCONC.GV-RIL_ch26 | QTL | 54 cM | 58.9 cM | 54.6 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qCACONC.GV-RIL_ch18 | QTL | 49.2 cM | 58.6 cM | 54.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qMGCONC.GV-RIL_ch18 | QTL | 49 cM | 57.7 cM | 54.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qNACONC.GV-RIL_ch18 | QTL | 6.1 cM | 14.4 cM | 10.6 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qMNCONC.GV-RIL_ch18 | QTL | 12.2 cM | 20.6 cM | 15.5 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qZNCONC.GV-RIL_ch18 | QTL | 15.3 cM | 23 cM | 19.5 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qCUCONC.GV-RIL_ch18 | QTL | 59.6 cM | 61.5 cM | 60.4 cM |
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