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Map Overview
Name | Guazuncho-2 x VH8-4602, RIL (2009) |
Species | Gossypium hirsutum x barbadense
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Population type | RIL |
Source url | http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp |
Genome group | AD |
Map type | genetic |
Map unit | cM |
Maternal parent | Guazuncho-2 |
Paternal parent | VH8-4602 |
Number of loci | 800 |
Number of QTL | 47 |
Number of linkage groups | 26 |
Publication | [view all] |
Contact | TropGene
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Stock
Name | Type | Details |
Guazuncho-2 x VH8-4602, RIL | population | Alias: | GV-RIL | Description: | genetic mapping | Secondary id: | cdbpop_000020 | Pedigree: | Guazuncho-2 / VH8-4602 |
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Publication
Year | Publications |
2009 | Lacape J, Jacobs J, Arioli T, Derijcker R, Forestier-Chiron N, Llewellyn D, Jean J, Thomas E, Viot C. A new interspecific, Gossypium hirsutum x G. barbadense, RIL population: towards a unified consensus linkage map of tetraploid cotton. Theoretical and applied genetics TAG. 2009; 119(2):281-292. |
Map Loci
This map contains 800 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | MUSB1001 | MUSB1001 | marker_locus | 44.52 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | MUSB1000 | MUSB1000 | marker_locus | 45.35 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | BNL3254 | BNL3254 | marker_locus | 46.27 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | BNL3431 | BNL3431 | marker_locus | 60.01 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | MUCS0557 | MUCS557 | marker_locus | 61.13 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | BNL3147 | BNL3147 | marker_locus | 65.35 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch11/lgA03 | CIR0254 | CIR254 | marker_locus | 66.26 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | JESPR0300 | JESPR300 | marker_locus | 0 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | A1614 | A1614 | marker_locus | 0.02 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | CIR0272 | CIR272 | marker_locus | 1.72 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | CIR0362 | CIR362 | marker_locus | 7.98 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | BNL3537 | BNL3537 | marker_locus | 14.75 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | CIR0081 | CIR081 | marker_locus | 19.85 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | BNL1679 | BNL1679 | marker_locus | 24.41 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | M63 | M63 | marker_locus | 25.44 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | E31M61-M129.6 | E31M61-M129.6 | marker_locus | 27.27 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | E32M48-M401.1 | E32M48-M401.1 | marker_locus | 27.87 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | CMS0037 | CMS37 | marker_locus | 33.55 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | E43M49-M238.0 | E43M49-M238.0 | marker_locus | 33.99 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | BNL1673 | BNL1673 | marker_locus | 34.22 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | E32M51-M95.0 | E32M51-M95.0 | marker_locus | 34.27 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | NAU4089 | NAU4089 | marker_locus | 35.57 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | BNL3261 | BNL3261 | marker_locus | 36.33 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | CIR0167 | CIR167 | marker_locus | 38.54 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch12 | BNL1707 | BNL1707 | marker_locus | 39.38 cM |
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Map QTL
This map contains 47 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qFECONC.GV-RIL_ch14 | QTL | 83 cM | 95.4 cM | 88 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qZNCONC.GV-RIL_ch14 | QTL | 81.4 cM | 94.3 cM | 88 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch14 | qBCONC.GV-RIL_ch14 | QTL | 73 cM | 81.4 cM | 76.1 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qKCONC.GV-RIL_ch22 | QTL | 23 cM | 38.4 cM | 31.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qMGCONC.GV-RIL_ch22 | QTL | 0 cM | 4.2 cM | 0 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qSCONC.GV-RIL_ch22 | QTL | 40.2 cM | 52.5 cM | 43.4 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch22 | qFECONC.GV-RIL_ch22 | QTL | 46.2 cM | 57.1 cM | 49.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch19/lgD08 | qBCONC.GV-RIL_ch19 | QTL | 44.1 cM | 46.2 cM | 44.9 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch25 | qBCONC.GV-RIL_ch25 | QTL | 0.3 cM | 16.3 cM | 10.3 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch24/lgD03 | qCACONC.GV-RIL_ch24 | QTL | 25.4 cM | 36.8 cM | 29.8 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch24/lgD03 | qNACONC.GV-RIL_ch24 | QTL | 41.4 cM | 50.4 cM | 45.8 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch23 | qMNCONC.GV-RIL_ch23 | QTL | 28.4 cM | 35.6 cM | 32 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch20 | qMNCONC.GV-RIL_ch20 | QTL | 31 cM | 41.2 cM | 36.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch21/lgD02 | qPCONC.GV-RIL_ch21 | QTL | 32.9 cM | 46.4 cM | 36.9 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch21/lgD02 | qMNCONC.GV-RIL_ch21 | QTL | 110.5 cM | 129.9 cM | 121.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch26 | qZNCONC.GV-RIL_ch26 | QTL | 54 cM | 58.9 cM | 54.6 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qCACONC.GV-RIL_ch18 | QTL | 49.2 cM | 58.6 cM | 54.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qMGCONC.GV-RIL_ch18 | QTL | 49 cM | 57.7 cM | 54.7 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qNACONC.GV-RIL_ch18 | QTL | 6.1 cM | 14.4 cM | 10.6 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qMNCONC.GV-RIL_ch18 | QTL | 12.2 cM | 20.6 cM | 15.5 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qZNCONC.GV-RIL_ch18 | QTL | 15.3 cM | 23 cM | 19.5 cM |
Guazuncho-2 x VH8-4602, RIL (2009).ch18 | qCUCONC.GV-RIL_ch18 | QTL | 59.6 cM | 61.5 cM | 60.4 cM |
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