CIR0119, CIR0119 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0119
AliasCIR119
Genbank IDAJ567068
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567068
Source Typegenomic
Repeat Motif(GT)8
PCR ConditionAnnealing temperature: 50
Primer 1CIR119_F: GGACCATGCAAAGAAG
Primer 2CIR119_R: AAAGGCTGTTTCTACCC
Product Length255
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567068
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567068AJ567068Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch08_At.08N/A74.4CIR119aView
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch24_Dt.08N/A43.2CIR119bView
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch24_Dt.08N/A29.95CIR119View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch08_At.08N/A53.73CIR119View
5Guazuncho-2 x VH8-4602, RIL (2009)AD_ch08_At.08N/A33.07CIR119View
6AD-genome wide Reference Map (2009)AD_ch08_At.08N/A56cir0119View
7AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A179cir0119View
Sequence
>CIR0119 ID=CIR0119; Name=CIR0119; organism=Gossypium hirsutum; type=genetic_marker; length=255bp
GGACCATGCAAAGAAGCTTAGAAACAAATATAGATAAAAAAAAGTGTGTG
TGTGTGTGTATGGTTTCTTAAATAAATGCTAGCAAAACAGTGGAGAGTAG
CTAGTGAAGTGATAGAGCAGATTTCTTGGAAGGGCATATCGAGGGATTGG
GTTGTAAAATGGTGTGAAAATTTAGTAAACAAATAGCAAGATGCAGGGCA
AAGCTTGTGTGGAAGACAGTTGGCGAAATGGGGTGTGTGGGTAGAAACAG
CCTTT