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Marker Overview
Name | HAU3071 |
Genbank ID | ES806641 |
Type | SSR |
Species | Gossypium spp. |
Source Sequence | ES806641.1
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Source Type | EST |
Repeat Motif | (GTAT)5 |
PCR Condition | Annealing temperature: 56.0 |
Primer 1 | HAU3071_F: TCCTCGGAATCTTCGAGTAGCGA |
Primer 2 | HAU3071_R: ACGACAAACGTCAACCATAAGACA |
Product Length | 339 |
Publication | [view all] |
Comment | Primer data obtained in 2012 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch14_Dt.02 | N/A | 102.2 | HAU3071 | View |
2 | Yumian-1 x T586, RIL (2015) | AD_ch14_Dt.02 | N/A | 4.9 | HAU3071 | View |
3 | DH962 X Ji Mian 5, F2 (2015) | AD_ch02_At.02 | N/A | 11.12 | HAU3071 | View |
4 | GX1135 x GX100-2, RIL (2015) | AD_ch02_At.02 | N/A | 2.5 | HAU3071 | View |
5 | GX1135 x GX100-2, RIL (2016) | AD_ch02_At.02 | N/A | 2.5 | HAU3071 | View |
6 | GX1135 x VGX100-2, RIL (2016) | AD_ch02_At.02 | N/A | 2.7 | HAU3071 | View |
7 | DH962 x Ji Mian 5, RIL (2015) | AD_ch02_At.02 | N/A | 5.7 | HAU3071 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch14_Dt.02 | N/A | 11.7 | HAU3071 | View |
9 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch14_Dt.02 | N/A | 75.1 | HAU3071 | View |
10 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch14_Dt.02 | N/A | 3.2 | HAU3071 | View |
Sequence
>HAU3071 ID=HAU3071; Name=HAU3071; organism=Gossypium spp.; type=genetic_marker; length=339bp TCCTCGGAATCTTCGAGTAGCGATGATGAAGAGAAAGGATCAAGAATATT GAAGTCAAAATCTAGAAGAAAGAAGAAAAAGAAGAGCAAATCAACAAAAA ATAAGAGCTCAACAAGCTGATGAGGTCTTGGCTGAAGACTTAATGGTATG TATGTATGTATGTATGTGTATTGAGTGGTCGTAAGTCTGAGTTTATATTG GCTTATGCTAAGAAAAAGAAGAGCTCAACAAGCTGATGAGGTCCTGTCTG AAGACTTAAATGGTATGCATGTATGTGTGTATGTGTATTGAGTGTTCGTA AGTCCGAGTTTATATTGTCTTATGGTTGACGTTTGTCGT
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