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Marker Overview
Name | HAU3069 |
Genbank ID | ES829517 |
Type | SSR |
Species | Gossypium spp. |
Source Sequence | ES829517.1
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Source Type | EST |
Repeat Motif | (ATAC)10 |
PCR Condition | Annealing temperature: 55.7 |
Primer 1 | HAU3069_F: ACAAGCAGGCCAAGAGAACCA |
Primer 2 | HAU3069_R: AGAAGGCACGTTGCAAGTGTTA |
Product Length | 230 |
Publication | [view all] |
Comment | Primer data obtained in 2012 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch19_Dt.05 | N/A | 195.16 | HAU3069 | View |
2 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch05_At.05 | N/A | 40.7 | HAU3069 | View |
3 | Yumian-1 x T586, RIL (2015) | AD_ch19_Dt.05 | N/A | 16.5 | HAU3069 | View |
4 | GX1135 x GX100-2, RIL (2015) | AD_ch19_Dt.05 | N/A | 82.8 | HAU3069 | View |
5 | GX1135 x GX100-2, RIL (2016) | AD_ch19_Dt.05 | N/A | 82.8 | HAU3069 | View |
6 | Emian-22 x 3-79, BC1 (2015) | AD_ch19_Dt.05 | N/A | 206.7 | HAU3069 | View |
7 | GX1135 x VGX100-2, RIL (2016) | AD_ch19_Dt.05 | N/A | 17.5 | HAU3069 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch19_Dt.05 | N/A | 192.7 | HAU3069 | View |
9 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch19_Dt.05 | N/A | 25.5 | HAU3069 | View |
10 | LMY28 x XLZ24, RIL (2018) | AD_ch05_At.05 | N/A | 0 | HAU3069 | View |
11 | LMY22 x LY343, RIL (2016) | chr.19-2 | N/A | 0 | HAU3069 | View |
12 | LMY22 x LY343, RIL (2020) | D05 | N/A | 145.61 | HAU3069 | View |
13 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch19_Dt.05 | N/A | 17.9 | HAU3069 | View |
14 | MGG-293-793, MAGIC (2018) | AD_ch19_Dt.05 | N/A | 206.7 | HAU3069 | View |
Sequence
>HAU3069 ID=HAU3069; Name=HAU3069; organism=Gossypium spp.; type=genetic_marker; length=230bp ACAAGCAGGCCAAGAGAACCAATCAATGCTGTACCTTACTGTAACCTTCC AGAGAAAGCAGATGTGCTATAATGACTTTCATCTGTTCTGGTGACTGAAA GCTCTAATGGTACCGTAAGAAAAGGGAAATGAAACCAAAACATTCAAAAG GATGATTTTCATATACATACATACATACATACATACATACATACATACAT ACATTATATAACACTTGCAACGTGCCTTCT
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