TX-1842

Germplasm Overview


Name	TX-1842
Alias	AS-151 [view all 3]
GRIN ID	PI 530473
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Guadeloupe
Origin Detail	Guadeloupe, Marie Galante
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 49]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: IRCT-UN-FAO
Reference	N/A

Alias


Synonym
AS-151
PI 530473
TEX 1842

Image


File Name	Legend	Dataset
TX-1842_CS17-1528_5D3_3892_LB.jpg	[TX-1842] leaf close up of the back surface, College Station Plot-1528, 2017	NCGC digital imaging (College Station, 2017)
TX-1842_CS17-1528_5D3_3893_ST.jpg	[TX-1842] stem, College Station Plot-1528, 2017	NCGC digital imaging (College Station, 2017)
TX-1842_CS17-1528_IMG_4670_ST.jpg	[TX-1842] stem, College Station Plot-1528, 2017	NCGC digital imaging (College Station, 2017)
TX-1842_CS17-1528_IMG_4671_L.jpg	[TX-1842] leaf, College Station Plot-1528, 2017	NCGC digital imaging (College Station, 2017)
TX-1842_CS17-1528_MG_2031_ST.jpg	[TX-1842] stem, College Station Plot-1528, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 49 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	boll size	medium	MX_CLM_TCM_2012	708
2	NCGC germplasm evaluation, T12	bract nectaries	reduced	MX_CLM_TCM_2012	708
3	NCGC germplasm evaluation, T12	bract teeth size	medium	MX_CLM_TCM_2012	708
4	NCGC germplasm evaluation, T12	bract type	normal	MX_CLM_TCM_2012	708
5	NCGC germplasm evaluation, T12	canopy type	typical	MX_CLM_TCM_2012	708
6	NCGC germplasm evaluation, T12	leaf color	green	MX_CLM_TCM_2012	708
7	NCGC germplasm evaluation, T12	leaf gossypol glands	medium	MX_CLM_TCM_2012	708
8	NCGC germplasm evaluation, T12	leaf shape	normal	MX_CLM_TCM_2012	708
9	NCGC germplasm evaluation, T12	leaf size	medium	MX_CLM_TCM_2012	708
10	NCGC germplasm evaluation, T12	petal color	cream	MX_CLM_TCM_2012	708
11	NCGC germplasm evaluation, T12	petal spot	medium	MX_CLM_TCM_2012	708
12	NCGC germplasm evaluation, T12	photoperiod	open bolls	MX_CLM_TCM_2012	708
13	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	708
14	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	708
15	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	708
16	NCGC germplasm evaluation, T12	population homogeneity	segregate	MX_CLM_TCM_2012	708
17	NCGC germplasm evaluation, T12	stem gossypol glands	medium	MX_CLM_TCM_2012	708
18	NCGC germplasm evaluation, T12	stigma exsertion	normal	MX_CLM_TCM_2012	708
19	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012	708
20	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012	708
21	NCGC germplasm evaluation, T12	plant height (m)	1.37	MX_CLM_TCM_2012	708
22	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012	708
23	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	708
24	NCGC germplasm evaluation, T12	productiveness	25-36 per plant	MX_CLM_TCM_2012	708

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	142\|142	bnl2443_142; bnl2443_142
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	117\|117	bnl1495_117; bnl1495_117
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	189\|189	bnl2495_189; bnl2495_189
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	107\|111	gh283_107; gh283_111
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	160\|160	bnl3992_160; bnl3992_160
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|138\|145	bnl1531_116; bnl1531_121; bnl1531_138; bnl1531_145
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|194	bnl3644_185; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|180\|182	bnl3371_168; bnl3371_180; bnl3371_182
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	129\|129	nau2140_129; nau2140_129
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|194	dpl0135_156; dpl0135_194
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|197	bnl0256_182; bnl0256_197
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	167\|176\|184	tmb0043_167; tmb0043_176; tmb0043_184
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	149\|149	bnl2960_149; bnl2960_149
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	195\|203	tmb0836_195; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|172	bnl2681_128; bnl2681_172
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	214\|214	bnl3441_214; bnl3441_214
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	203\|203	bnl3580_203; bnl3580_203
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	186\|186	bnl1231_186; bnl1231_186
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|222\|232	bnl3594_182; bnl3594_222; bnl3594_232
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	172\|186	tmb1421_172; tmb1421_186
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	178\|190	bnl4061_178; bnl4061_190
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	346\|346	bnl3650_346; bnl3650_346
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|195	bnl3474_180; bnl3474_195
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|206	tmb0083_206; tmb0083_206

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	-
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	C
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	G
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	C

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Last

Cross References

External references for this accession


Database	Accession
COLL_race	TX-1842
GRIN	PI 530473

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530473	GRIN:
NCGC Cotton Race Collection (USA)	TX-1842

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