TX-1801

Germplasm Overview


Name	TX-1801
Alias	AS-5 [view all 3]
GRIN ID	PI 530432
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Martinique
Origin Detail	Martinique
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 30]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: IRCT-UN-FAO
Reference	N/A

Alias


Synonym
AS-5
PI 530432
TEX 1801

Image


File Name	Legend	Dataset
TX-1801_T11-0551_MG_3724_FO.jpg	[TX-1801] flower open, Tecoman Plot-0551, 2011	NCGC digital imaging (Tecoman, 2011)
TX-1801_CS17-1508_5D3_3822_BN.jpg	[TX-1801] boll showing nectaries, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_5D3_3823_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_IMG_4604_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_IMG_4605_L.jpg	[TX-1801] leaf, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_5D3_3821_LB.jpg	[TX-1801] leaf close up of the back surface, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_0131_FO.jpg	[TX-1801] flower open, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1978_B.jpg	[TX-1801] green boll, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1979_B.jpg	[TX-1801] green boll, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1981_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_0130_F.jpg	[TX-1801] flower, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 30 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T11	trichome density on stem	seg or off type	MX_CLM_TCM_2011	551
2	NCGC germplasm evaluation, T11	plant height (m)	1.07	MX_CLM_TCM_2011	551
3	NCGC germplasm evaluation, T11	leaf nectaries	one, main vein	MX_CLM_TCM_2011	551
4	NCGC germplasm evaluation, T11	plot plant stand	1 plant	MX_CLM_TCM_2011	551
5	NCGC germplasm evaluation, T11	productiveness	13-24 per plant	MX_CLM_TCM_2011	551

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	154\|154	bnl2443_154; bnl2443_154
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	117\|117	bnl1495_117; bnl1495_117
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	189\|191	bnl2495_189; bnl2495_191
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	107\|107	gh283_107; gh283_107
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	152\|152	bnl3992_152; bnl3992_152
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|128\|138	bnl1531_116; bnl1531_121; bnl1531_128; bnl1531_138
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|194	bnl3644_185; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|194	bnl3371_168; bnl3371_194
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	129\|129	nau2140_129; nau2140_129
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|194	dpl0135_156; dpl0135_194
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|207	bnl0256_182; bnl0256_207
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	173\|176\|184	tmb0043_173; tmb0043_176; tmb0043_184
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	149\|149	bnl2960_149; bnl2960_149
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	199\|203	tmb0836_199; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160\|172	bnl2681_128; bnl2681_160; bnl2681_172
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	208\|208	bnl3441_208; bnl3441_208
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	201\|211	bnl3580_201; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	186\|186	bnl1231_186; bnl1231_186
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|232	bnl3594_182; bnl3594_232
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	180\|180	tmb1421_180; tmb1421_180
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	201\|201	bnl4061_201; bnl4061_201
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	346\|354	bnl3650_346; bnl3650_354
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|189	bnl3474_180; bnl3474_189
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	A
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	A
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	M
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	R
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	Y

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Last

Cross References

External references for this accession


Database	Accession
COLL_race	TX-1801
GRIN	PI 530432

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530432	GRIN:
NCGC Cotton Race Collection (USA)	TX-1801

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