TX-1801

Germplasm Overview


Name	TX-1801
Alias	AS-5 [view all 3]
GRIN ID	PI 530432
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Martinique
Origin Detail	Martinique
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 30]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: IRCT-UN-FAO
Reference	N/A

Alias


Synonym
AS-5
PI 530432
TEX 1801

Image


File Name	Legend	Dataset
TX-1801_T11-0551_MG_3724_FO.jpg	[TX-1801] flower open, Tecoman Plot-0551, 2011	NCGC digital imaging (Tecoman, 2011)
TX-1801_CS17-1508_5D3_3822_BN.jpg	[TX-1801] boll showing nectaries, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_5D3_3823_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_IMG_4604_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_IMG_4605_L.jpg	[TX-1801] leaf, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_5D3_3821_LB.jpg	[TX-1801] leaf close up of the back surface, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_0131_FO.jpg	[TX-1801] flower open, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1978_B.jpg	[TX-1801] green boll, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1979_B.jpg	[TX-1801] green boll, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_1981_ST.jpg	[TX-1801] stem, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)
TX-1801_CS17-1508_MG_0130_F.jpg	[TX-1801] flower, College Station Plot-1508, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 30 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T11	trichome density on stem	seg or off type	MX_CLM_TCM_2011	551
2	NCGC germplasm evaluation, T11	plant height (m)	1.07	MX_CLM_TCM_2011	551
3	NCGC germplasm evaluation, T11	leaf nectaries	one, main vein	MX_CLM_TCM_2011	551
4	NCGC germplasm evaluation, T11	plot plant stand	1 plant	MX_CLM_TCM_2011	551
5	NCGC germplasm evaluation, T11	productiveness	13-24 per plant	MX_CLM_TCM_2011	551

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	158\|168	dpl0071_158; dpl0071_168
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	197\|197	bnl1673_197; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	212\|239	bnl3090_212; bnl3090_239
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	235\|235	cir0320_235; cir0320_235
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	116\|119\|125	dpl0249_116; dpl0249_119; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	186\|195	mghes0022_186; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	167\|167	bnl4028_167; bnl4028_167
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	141\|141	bnl1897_141; bnl1897_141
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|140	dpl0570_126; dpl0570_140
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	160\|180\|191	tmb1427_160; tmb1427_180; tmb1427_191
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	96\|96	cir0105_96; cir0105_96
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|186\|192	cir0253_154; cir0253_186; cir0253_192
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	142\|149	tmb2068_142; tmb2068_149
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	240\|240	bnl2570_240; bnl2570_240
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246\|248	cir0347_236; cir0347_246; cir0347_248
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	222\|227\|236	cir0009_222; cir0009_227; cir0009_236
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	138\|140\|142	bnl0530_138; bnl0530_140; bnl0530_142
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	94\|98	bnl0409_94; bnl0409_98
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|137\|166	dpl0196_135; dpl0196_137; dpl0196_166
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	141\|166	bnl1521_141; bnl1521_166
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|203\|226	tmb1640_196; tmb1640_200; tmb1640_203; tmb1640_226
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|240	dpl0541_206; dpl0541_240

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Last

Cross References

External references for this accession


Database	Accession
COLL_race	TX-1801
GRIN	PI 530432

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530432	GRIN:
NCGC Cotton Race Collection (USA)	TX-1801

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