TX-1556

Germplasm Overview


Name	TX-1556
Alias	AS-49 [view all 3]
GRIN ID	PI 530187
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Dominica
Origin Detail	Dominica
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 44]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: IRCT-UN-FAO
Reference	N/A

Alias


Synonym
AS-49
PI 530187
TEX 1556

Image


File Name	Legend	Dataset
TX-1556_CS17-1023_5D3_3342_LB.jpg	[TX-1556] leaf close up of the back surface, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_5D3_3343_BN.jpg	[TX-1556] boll showing nectaries, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_5D3_3344_ST.jpg	[TX-1556] stem, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_IMG_4142_ST.jpg	[TX-1556] stem, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_IMG_4143_L.jpg	[TX-1556] leaf, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_MG_0073_F.jpg	[TX-1556] flower, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_MG_0074_FO.jpg	[TX-1556] flower open, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_MG_1625_B.jpg	[TX-1556] green boll, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_MG_1626_B.jpg	[TX-1556] green boll, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)
TX-1556_CS17-1023_MG_1627_ST.jpg	[TX-1556] stem, College Station Plot-1023, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 44 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T11	bract type	normal	MX_CLM_TCM_2011	421
2	NCGC germplasm evaluation, T11	leaf color	green	MX_CLM_TCM_2011	421
3	NCGC germplasm evaluation, T11	leaf gossypol glands	medium	MX_CLM_TCM_2011	421
4	NCGC germplasm evaluation, T11	leaf shape	normal	MX_CLM_TCM_2011	421
5	NCGC germplasm evaluation, T11	lint color	white	MX_CLM_TCM_2011	421
6	NCGC germplasm evaluation, T11	petal color	cream	MX_CLM_TCM_2011	421
7	NCGC germplasm evaluation, T11	petal spot	seg or off type	MX_CLM_TCM_2011	421
8	NCGC germplasm evaluation, T11	plant shape	normal	MX_CLM_TCM_2011	421
9	NCGC germplasm evaluation, T11	plot maturity	more than half open	MX_CLM_TCM_2011	421
10	NCGC germplasm evaluation, T11	pollen color	cream	MX_CLM_TCM_2011	421
11	NCGC germplasm evaluation, T11	population homogeneity	segregate	MX_CLM_TCM_2011	421
12	NCGC germplasm evaluation, T11	stem gossypol glands	medium	MX_CLM_TCM_2011	421
13	NCGC germplasm evaluation, T11	stigma exsertion	normal	MX_CLM_TCM_2011	421
14	NCGC germplasm evaluation, T11	trichome density on leaf	seg or off type	MX_CLM_TCM_2011	421
15	NCGC germplasm evaluation, T11	trichome density on stem	seg or off type	MX_CLM_TCM_2011	421
16	NCGC germplasm evaluation, T11	plant height (m)	1.07	MX_CLM_TCM_2011	421
17	NCGC germplasm evaluation, T11	leaf nectaries	one, main vein	MX_CLM_TCM_2011	421
18	NCGC germplasm evaluation, T11	plot plant stand	1 plant	MX_CLM_TCM_2011	421
19	NCGC germplasm evaluation, T11	productiveness	25-36 per plant	MX_CLM_TCM_2011	421

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	154\|154	bnl2443_154; bnl2443_154
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	113\|113	bnl1495_113; bnl1495_113
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	195\|195	bnl2495_195; bnl2495_195
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	105\|105	gh283_105; gh283_105
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	152\|152	bnl3992_152; bnl3992_152
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|134\|136	bnl1531_116; bnl1531_121; bnl1531_134; bnl1531_136
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|194	bnl3644_185; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|190	bnl3371_168; bnl3371_190
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	129\|129	nau2140_129; nau2140_129
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|176	dpl0135_156; dpl0135_176
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|207	bnl0256_182; bnl0256_207
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	176\|178	tmb0043_176; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	149\|153	bnl2960_149; bnl2960_153
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	199\|201	tmb0836_199; tmb0836_201
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	210\|214	bnl3441_210; bnl3441_214
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	211\|211	bnl3580_211; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	190\|190	bnl1231_190; bnl1231_190
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|230	bnl3594_182; bnl3594_230
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	180\|180	tmb1421_180; tmb1421_180
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	203\|203	bnl4061_203; bnl4061_203
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	346\|346	bnl3650_346; bnl3650_346
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|187	bnl3474_180; bnl3474_187
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	-
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	C
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	R
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	C

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1556
GRIN	PI 530187

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530187	GRIN:
NCGC Cotton Race Collection (USA)	TX-1556

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