mk-At_04-snapG-88.487-mRNA-1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2GY29_GOSDA (HTH OST-type domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A04G161300v1 PE=4 SV=1) HSP 1 Score: 1057.74 bits (2734), Expect = 0.000e+0 Identity = 513/515 (99.61%), Postives = 514/515 (99.81%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A2P5WBH0_GOSBA (HTH OST-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A04G144900v1 PE=4 SV=1) HSP 1 Score: 1056.59 bits (2731), Expect = 0.000e+0 Identity = 512/515 (99.42%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKL NLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLFNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2R295_GOSTO (HTH OST-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G160300v1 PE=4 SV=1) HSP 1 Score: 1056.2 bits (2730), Expect = 0.000e+0 Identity = 512/515 (99.42%), Postives = 514/515 (99.81%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKA+PSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKASPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J9HZ06_9ROSI (HTH OST-type domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_020873 PE=4 SV=1) HSP 1 Score: 1053.89 bits (2724), Expect = 0.000e+0 Identity = 509/515 (98.83%), Postives = 514/515 (99.81%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRG+VVVDSNVNVLPPPMNQQK+TSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFS+VSRSLAEYTSNPSVC+PSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGTVVVDSNVNVLPPPMNQQKRTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSMVSRSLAEYTSNPSVCLPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2ZNX1_GOSMU (HTH OST-type domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A04G153300v1 PE=4 SV=1) HSP 1 Score: 1053.51 bits (2723), Expect = 0.000e+0 Identity = 512/515 (99.42%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIV KGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVCKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0D2V5L1_GOSRA (HTH OST-type domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_012G150000 PE=4 SV=1) HSP 1 Score: 1051.2 bits (2717), Expect = 0.000e+0 Identity = 507/515 (98.45%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRG+V+VDSNVNVLPPPMNQQK+TSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVD+ARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFS VSRSLAEYTSNPSVC+PSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGTVLVDSNVNVLPPPMNQQKRTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDVARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSTVSRSLAEYTSNPSVCLPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8VVD2_9ROSI (HTH OST-type domain-containing protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_003136 PE=4 SV=1) HSP 1 Score: 1050.04 bits (2714), Expect = 0.000e+0 Identity = 507/515 (98.45%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQR +VVVDSNVNVLPPPMNQQK+TSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVD+ARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFS+VSRSLAEYTSNPSVC+PSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRETVVVDSNVNVLPPPMNQQKRTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDVARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSMVSRSLAEYTSNPSVCLPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A8J5Z0T6_9ROSI (HTH OST-type domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_003639 PE=4 SV=1) HSP 1 Score: 1049.65 bits (2713), Expect = 0.000e+0 Identity = 508/515 (98.64%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRG+VVVDSNVNVLPPPMNQQK+TSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVP SKALMPPRGGPVDIARCFMGCHIS+NPDGQNEEEAIVYKGASQSCYNPRDFS+VSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD+RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGTVVVDSNVNVLPPPMNQQKRTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPLSKALMPPRGGPVDIARCFMGCHISENPDGQNEEEAIVYKGASQSCYNPRDFSMVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8SY61_GOSDV (HTH OST-type domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_003076 PE=4 SV=1) HSP 1 Score: 1048.11 bits (2709), Expect = 0.000e+0 Identity = 506/515 (98.25%), Postives = 513/515 (99.61%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQR +VVVDSNVNVLPPPMNQQK+TSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVD+ARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFS+VSRSLAEYTSNPSVC+PSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVD++DQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRETVVVDSNVNVLPPPMNQQKRTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDVARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSMVSRSLAEYTSNPSVCLPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDEQDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Match: A0A9D3ZJZ2_9ROSI (HTH OST-type domain-containing protein OS=Gossypium stocksii OX=47602 GN=J1N35_042120 PE=4 SV=1) HSP 1 Score: 1048.11 bits (2709), Expect = 0.000e+0 Identity = 507/515 (98.45%), Postives = 512/515 (99.42%), Query Frame = 0
Query: 1 MANLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
MANLNASTSLVPSESSEQRG+V+VDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMP RGGPVDIARCF+GCHISDNPDGQNEEEAIVYKGASQSCYNPRDFS+VSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDI GLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVV +RDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS
Sbjct: 1 MANLNASTSLVPSESSEQRGTVLVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPSRGGPVDIARCFIGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSMVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDINGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAPPLVLTRKDKKGKGIHEEITDVTAGAGSSDEFSDEERVVVAERDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAVGS 515
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT2G15560.1 (| Symbols: no symbol available | no full name available | chr2:6788319-6789788 REVERSE LENGTH=489) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 292/520 (56.15%), Postives = 369/520 (70.96%), Query Frame = 0
Query: 3 NLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNP--DGQNEEEAIVYKGASQSCY--NPRDFS--LVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAP--PLVLTRKDKKGKGIHEEITDVTAGAG-SSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAV 513
N +A+T+LV +S EQR + +++N++ Q+ +S+DG +AILWD+ENCPVPSDVRPEDVA NIRMA+++HPVI G V+ FSAYGDFN FPRR+REGCQRTGVKLIDVPNGRKDA+DKAIL+DMFLF LDN PP++I+L+SGDVDFAPALHILGQRGY VILVIP+ V V+SAL +AGKFVWDW S+ GEGFVP K PR P MGC+I DN DG NE+E I+Y+G +CY +PR+ S +VS+ EY+S C PS E+ CP TMWV PGD+ GLKGQLVKLLELSGGC+PL RVP+EYQ+ F +PL+V++YG KLV+LFKKM D + +DGKG+K+FVYLRN K N +P P+VL R+++KGK E VT G SSDE SD V +++ NLE+FK+ELQ+ILVSY C++ + CFE IY+ RYK+ L Y + V LE+LFDK+RDVV +HE+P + RK + V
Sbjct: 11 NPSAATTLVSIDSDEQR-RIKYLADLNMIA----TQRHSSTDGPMAILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKAILIDMFLFVLDNKPPATIVLVSGDVDFAPALHILGQRGYTVILVIPSSVYVNSALSNAGKFVWDWHSIVHGEGFVPRCK----PRVVPY-----LMGCNIGDNSNMDGLNEDETILYRG---NCYSSDPRESSSLMVSQFRNEYSSGVMSCWPSNSG------------ESMACPPSGHLESTMWVAPGDLNGLKGQLVKLLELSGGCIPLMRVPSEYQRKFSKPLFVSDYGVAKLVDLFKKMSDVIVVDGKGNKRFVYLRNSKPNIISPSSPVVLLRRERKGK----EPNGVTTNGGVSSDEMSDTGSV--------QSERNLEEFKFELQDILVSYCCQVQMDCFEAIYKLRYKRPLAYTNMGVNHLEQLFDKLRDVVAIHEDPATGRKLISPV 489
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT2G15560.2 (| Symbols: no symbol available | no full name available | chr2:6788319-6789788 REVERSE LENGTH=445) HSP 1 Score: 504.597 bits (1298), Expect = 1.445e-176 Identity = 272/514 (52.92%), Postives = 340/514 (66.15%), Query Frame = 0
Query: 3 NLNASTSLVPSESSEQRGSVVVDSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARGEGFVPPSKALMPPRGGPVDIARCFMGCHISDNPDGQNEEEAIVYKGASQSCYNPRDFSLVSRSLAEYTSNPSVCVPSYPATFRSQSLPCGLNEASGCPGYYDQNDTMWVQPGDIKGLKGQLVKLLELSGGCMPLTRVPAEYQKIFGRPLYVAEYGALKLVNLFKKMGDTLAIDGKGHKKFVYLRNWKANPSAP--PLVLTRKDKKGKGIHEEITDVTAGAG-SSDEFSDEERVVVDKRDQRKTDDNLEQFKYELQEILVSYSCRIFLGCFEEIYQQRYKKTLDYRKLSVEKLEELFDKVRDVVVLHEEPVSKRKFLCAV 513
N +A+T+LV +S EQR + +++N++ Q+ +S+DG +AILWD+ENCPVPSDVRPEDVA NIRMA+++HPVI G V+ FSAYGDFN FPRR+REGCQRTGVKLIDVPNGRKDA+DKAIL+DMFLF LDN PP++I+L+SGDVDFAPALHILGQRGY VILVIP+ V V+SAL +AGKFVWDW S+ GEGFVP K PR P MGC+I D N + GLNE TMWV PGD+ GLKGQLVKLLELSGGC+PL RVP+EYQ+ F +PL+V++YG KLV+LFKKM D + +DGKG+K+FVYLRN K N +P P+VL R+++KGK E VT G SSDE SD V +++ NLE+FK+ELQ+ILVSY C++ + CFE IY+ RYK+ L Y + V LE+LFDK+RDVV +HE+P + RK + V
Sbjct: 11 NPSAATTLVSIDSDEQR-RIKYLADLNMIA----TQRHSSTDGPMAILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKAILIDMFLFVLDNKPPATIVLVSGDVDFAPALHILGQRGYTVILVIPSSVYVNSALSNAGKFVWDWHSIVHGEGFVPRCK----PRVVPY-----LMGCNIG---DNSNMD--------------------------------------------------GLNEDETILYRGHLESTMWVAPGDLNGLKGQLVKLLELSGGCIPLMRVPSEYQRKFSKPLFVSDYGVAKLVDLFKKMSDVIVVDGKGNKRFVYLRNSKPNIISPSSPVVLLRRERKGK----EPNGVTTNGGVSSDEMSDTGSV--------QSERNLEEFKFELQDILVSYCCQVQMDCFEAIYKLRYKRPLAYTNMGVNHLEQLFDKLRDVVAIHEDPATGRKLISPV 445
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT3G62210.1 (| Symbols: EDA32 | embryo sac development arrest 32 | chr3:23026910-23028113 REVERSE LENGTH=279) HSP 1 Score: 119.783 bits (299), Expect = 3.191e-30 Identity = 66/151 (43.71%), Postives = 86/151 (56.95%), Query Frame = 0
Query: 47 VAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP + +A NI AL+ + + SAYGD + P ++ TG++L VP G KDA+DK ILVDM +A DNP PS+IMLISGD DF+ ALH L R Y ++L P S+ L A VW W S+ G
Sbjct: 24 TSVWWDIENCQVPKGLDAHGIAQNISSALKK--MNYCGRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVKDASDKKILVDMLFWAFDNPAPSNIMLISGDRDFSNALHKLSLRRYNILLAHPP--KASAPLSQAATTVWLWTSLLAG 170
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT3G62200.1 (| Symbols: no symbol available | no full name available | chr3:23023437-23025671 REVERSE LENGTH=673) HSP 1 Score: 123.635 bits (309), Expect = 1.105e-29 Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 0
Query: 25 DSNVNVLPPPMNQQKQTSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
D N +P M + + + SV WDIENC VP+ + +A NI AL+ + + SAYGD N P ++ TG+ L VP G KDA+DK ILVDM +ALDNP P++ MLISGD DF+ ALH L R Y V+L P + S L A K VW W S++ G
Sbjct: 10 DFGTNSVPAEMAEAQYVRAKTSV--WWDIENCQVPNGLDAHGIAQNITSALQK--MNYCGPVSISAYGDTNRIPLTIQHALNSTGIALNHVPAGVKDASDKKILVDMLFWALDNPAPANFMLISGDRDFSNALHGLRMRRYNVLLAQP--LKASVPLVHAAKTVWLWTSLSAG 176
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.11 (| Symbols: no symbol available | no full name available | chr5:24615480-24619554 FORWARD LENGTH=981) HSP 1 Score: 118.242 bits (295), Expect = 1.172e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.1 (| Symbols: no symbol available | no full name available | chr5:24615480-24619886 FORWARD LENGTH=995) HSP 1 Score: 117.857 bits (294), Expect = 1.342e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.9 (| Symbols: no symbol available | no full name available | chr5:24615480-24619886 FORWARD LENGTH=1039) HSP 1 Score: 117.857 bits (294), Expect = 1.353e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.10 (| Symbols: no symbol available | no full name available | chr5:24615480-24619886 FORWARD LENGTH=1010) HSP 1 Score: 117.857 bits (294), Expect = 1.405e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.8 (| Symbols: no symbol available | no full name available | chr5:24615480-24618997 FORWARD LENGTH=846) HSP 1 Score: 117.857 bits (294), Expect = 1.431e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Match: AT5G61190.6 (| Symbols: no symbol available | no full name available | chr5:24615480-24619886 FORWARD LENGTH=1054) HSP 1 Score: 117.857 bits (294), Expect = 1.521e-27 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 45 GSVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYIVILVIPAGVGVSSALCSAGKFVWDWPSVARG 197
++ WDIENC VP +A N+ +L + G V + SAYGD N P ++ TGV L +P G KDA+DK ILVDM L+A+DNP P++++LISGD DF+ ALH L R Y ++L P V L +A + VW W +A G
Sbjct: 11 AKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVSI-SAYGDTNLIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRMRRYNILLAQPPRASV--PLVAAARDVWLWTVLASG 159 The following BLAST results are available for this feature:
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of mk-At_04-snapG-88.487-mRNA-1 vs. Araport11
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for USDA v1.0 G. hirsutum (AD1) PSC355 proteins
Date Performed: 2023-10-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355 ID=mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355; Name=mk-At_04-snapG-88.487-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=1548bpback to top protein sequence of mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355 >mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355 ID=mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355; Name=mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355; organism=Gossypium hirsutum; type=polypeptide; length=515bpback to top mRNA from alignment at A04:3331968..3334583+ Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355 ID=mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355; Name=mk-At_04-snapG-88.487-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=2616bp; location=Sequence derived from: A04:3331968..3334583+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at A04:3331968..3334583+ >mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355 ID=mk-At_04-snapG-88.487-mRNA-1_AD1_PSC355; Name=mk-At_04-snapG-88.487-mRNA-1; organism=Gossypium hirsutum; type=CDS; length=1548bp; location=Sequence derived from: A04:3331968..3334583+ (Gossypium hirsutumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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