TM-1 x 3-79, RIL (2014)

Map Overview

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NameTM-1 x 3-79, RIL (2014)
SpeciesGossypium hirsutum x barbadense
Map typegenetic
Population typeRIL
Map unitcM
Maternal parentTM-1
Paternal parent3-79
Population size186
Number of loci2486
Number of QTL75
Number of linkage groups26
Publication[view all]
ContactYu, John Z. (Zhi-Hong)
Stock
NameTypeDetails
TM-1 x 3-79, RILpopulation
Alias:T3-RIL
Description:genetic mapping
Population size:186
Alias:ctgpop_000059
Secondary id:cdbpop_000059
Pedigree:TM-1 / 3-79
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Map Loci
This map contains 2,486 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
TM-1 x 3-79, RIL (2014).chr05Gh260GH260marker_locus36.5 cM
TM-1 x 3-79, RIL (2014).chr05HAU0042HAU042marker_locus39 cM
TM-1 x 3-79, RIL (2014).chr05TMB0770tmb0770marker_locus41.7 cM
TM-1 x 3-79, RIL (2014).chr05BNL4030BNL4030bmarker_locus42.9 cM
TM-1 x 3-79, RIL (2014).chr05CM0065cm0065marker_locus43.5 cM
TM-1 x 3-79, RIL (2014).chr05JESPR0050JESPR050amarker_locus44 cM
TM-1 x 3-79, RIL (2014).chr05CIR0185CIR185marker_locus44.3 cM
TM-1 x 3-79, RIL (2014).chr05UCD_cg11343_68UCcg11343_68marker_locus44.6 cM
TM-1 x 3-79, RIL (2014).chr05MUSB1035MUSB1035bmarker_locus49.2 cM
TM-1 x 3-79, RIL (2014).chr05DPL0750DPL0750marker_locus53.6 cM
TM-1 x 3-79, RIL (2014).chr05JESPR0065JESPR065marker_locus56.8 cM
TM-1 x 3-79, RIL (2014).chr05UCD_cgs10046_302UCcgs10046_302marker_locus57.4 cM
TM-1 x 3-79, RIL (2014).chr05Gh262Gh262marker_locus59.9 cM
TM-1 x 3-79, RIL (2014).chr05Gh252GH252amarker_locus60.9 cM
TM-1 x 3-79, RIL (2014).chr05DPL0837DPL0837marker_locus61.8 cM
TM-1 x 3-79, RIL (2014).chr05MUSB1051MUSB1051marker_locus62.6 cM
TM-1 x 3-79, RIL (2014).chr05MUSB0592MUSB0592marker_locus63.7 cM
TM-1 x 3-79, RIL (2014).chr05NAU1172NAU1172marker_locus64.3 cM
TM-1 x 3-79, RIL (2014).chr05NAU1127NAU1127marker_locus64.4 cM
TM-1 x 3-79, RIL (2014).chr05BNL3241BNL3241marker_locus65.3 cM
TM-1 x 3-79, RIL (2014).chr05TMB1314TMB1314amarker_locus65.7 cM
TM-1 x 3-79, RIL (2014).chr05DPL0637DPL0637marker_locus65.9 cM
TM-1 x 3-79, RIL (2014).chr05DPL0810DPL0810marker_locus66.5 cM
TM-1 x 3-79, RIL (2014).chr05BNL3995BNL3995marker_locus67.6 cM
TM-1 x 3-79, RIL (2014).chr05MUSB0977MUSB0977amarker_locus69.4 cM
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Map QTL
This map contains 75 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
TM-1 x 3-79, RIL (2014).chr19qUQLW.T3-RIL_ch19.csQTL48.2 cM48.3 cM48.2 cM
TM-1 x 3-79, RIL (2014).chr19qFNS.T3-RIL_ch19.shQTL90.6 cM91.2 cM90.6 cM
TM-1 x 3-79, RIL (2014).chr19qFF.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFIM.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFM.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFEL.T3-RIL_ch19.csQTL140.7 cM141.8 cM143 cM
TM-1 x 3-79, RIL (2014).chr19qSI.T3-RIL_ch19.shQTL160.5 cM161.9 cM160.4 cM
TM-1 x 3-79, RIL (2014).chr20qLVFM.T3-RIL_ch20.shQTL10.5 cM11.8 cM10.5 cM
TM-1 x 3-79, RIL (2014).chr21qFEL.T3-RIL_ch21.1.csQTL0 cM6.9 cM1.5 cM
TM-1 x 3-79, RIL (2014).chr21qFLW.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qSL2.5.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qSL50.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qUQLW.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qFEL.T3-RIL_ch21.2.csQTL55.2 cM56.2 cM55.1 cM
TM-1 x 3-79, RIL (2014).chr21qLY.T3-RIL_ch21.csQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qSCY.T3-RIL_ch21.1.bbQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qSCY.T3-RIL_ch21.2.csQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qGTO.T3-RIL_ch21.shQTL108.9 cM109.9 cM108.8 cM
TM-1 x 3-79, RIL (2014).chr21qLI.T3-RIL_ch21.shQTL108.9 cM109.9 cM108.8 cM
TM-1 x 3-79, RIL (2014).chr22qGTO.T3-RIL_ch22.csQTL82.1 cM82.2 cM81.9 cM
TM-1 x 3-79, RIL (2014).chr23qFS.T3-RIL_ch23.bbQTL42.7 cM43.8 cM42.7 cM
TM-1 x 3-79, RIL (2014).chr23qSTEMD.T3-RIL_ch23.csQTL83.1 cM84.7 cM83.1 cM
TM-1 x 3-79, RIL (2014).chr24qLVFM.T3-RIL_ch14.shQTL15.7 cM18.5 cM15.6 cM
TM-1 x 3-79, RIL (2014).chr25qFF.T3-RIL_ch25.shQTL50.4 cM50.9 cM50.3 cM
TM-1 x 3-79, RIL (2014).chr25qFS.T3-RIL_ch25.shQTL69.1 cM70.5 cM69.1 cM
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