TX-1391

Germplasm Overview


Name	TX-1391
Alias	col.# 2880 [view all 5]
GRIN ID	PI 415115
Type	Landrace
Species	Gossypium hirsutum
In Collection	[view all]
Description	Herbaceous shrub to 3 m tall. Flowers white, prominent petal spots. Lint white. Cultivated.
Origin Country	Nicaragua
Origin Detail	Nicaragua, Boaco
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 73]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
col.# 2880
PI 415115
TEX 1391
TX 1391
2880

Image


File Name	Legend	Dataset
TX-1391_CS17-0705_5D3_2979_LB.jpg	[TX-1391] leaf close up of the back surface, College Station Plot-0705, 2017	NCGC digital imaging (College Station, 2017)
TX-1391_CS17-0705_5D3_2980_ST.jpg	[TX-1391] stem, College Station Plot-0705, 2017	NCGC digital imaging (College Station, 2017)
TX-1391_CS17-0705_IMG_3804_ST.jpg	[TX-1391] stem, College Station Plot-0705, 2017	NCGC digital imaging (College Station, 2017)
TX-1391_CS17-0705_IMG_3805_L.jpg	[TX-1391] leaf, College Station Plot-0705, 2017	NCGC digital imaging (College Station, 2017)
TX-1391_CS17-0705_MG_1327_ST.jpg	[TX-1391] stem, College Station Plot-0705, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 73 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T09	bract teeth size	medium	MX_CLM_TCM_2009	376
2	NCGC germplasm evaluation, T09	bract type	normal	MX_CLM_TCM_2009	376
3	NCGC germplasm evaluation, T09	leaf color	green	MX_CLM_TCM_2009	376
4	NCGC germplasm evaluation, T09	leaf gossypol glands	medium	MX_CLM_TCM_2009	376
5	NCGC germplasm evaluation, T09	leaf shape	normal	MX_CLM_TCM_2009	376
6	NCGC germplasm evaluation, T09	lint color	white	MX_CLM_TCM_2009	376
7	NCGC germplasm evaluation, T09	petal color	cream	MX_CLM_TCM_2009	376
8	NCGC germplasm evaluation, T09	petal spot	light	MX_CLM_TCM_2009	376
9	NCGC germplasm evaluation, T09	plot maturity	less than half open	MX_CLM_TCM_2009	376
10	NCGC germplasm evaluation, T09	pollen color	cream	MX_CLM_TCM_2009	376
11	NCGC germplasm evaluation, T09	stem gossypol glands	medium	MX_CLM_TCM_2009	376
12	NCGC germplasm evaluation, T09	stigma exsertion	normal	MX_CLM_TCM_2009	376
13	NCGC germplasm evaluation, T09	trichome density on leaf	hairy	MX_CLM_TCM_2009	376
14	NCGC germplasm evaluation, T09	trichome density on stem	hairy	MX_CLM_TCM_2009	376
15	NCGC germplasm evaluation, T09	plant height (m)	1.07	MX_CLM_TCM_2009	376
16	NCGC germplasm evaluation, T09	leaf nectaries	one, main vein	MX_CLM_TCM_2009	376
17	NCGC germplasm evaluation, T09	plot plant stand	1 plant	MX_CLM_TCM_2009	376
18	NCGC germplasm evaluation, T09	productiveness	25-36 per plant	MX_CLM_TCM_2009	376
19	NCGC germplasm evaluation, T12	boll color	dark green	MX_CLM_TCM_2012	V-0576
20	NCGC germplasm evaluation, T12	boll gossypol glands	medium	MX_CLM_TCM_2012	V-0576
21	NCGC germplasm evaluation, T12	boll nectaries	reduced	MX_CLM_TCM_2012	V-0576
22	NCGC germplasm evaluation, T12	boll pitting	smooth	MX_CLM_TCM_2012	V-0576
23	NCGC germplasm evaluation, T12	boll point	pointed	MX_CLM_TCM_2012	V-0576
24	NCGC germplasm evaluation, T12	boll shape	cone oval	MX_CLM_TCM_2012	V-0576
25	NCGC germplasm evaluation, T12	boll size	small	MX_CLM_TCM_2012	V-0576

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	158\|180	dpl0071_158; dpl0071_180
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	197\|197	bnl1673_197; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	198\|210	bnl3090_198; bnl3090_210
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	237\|237	cir0320_237; cir0320_237
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	116\|125	dpl0249_116; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	186\|195	mghes0022_186; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	163\|163	bnl4028_163; bnl4028_163
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	139\|139	bnl1897_139; bnl1897_139
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|140	dpl0570_126; dpl0570_140
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	155\|180	tmb1427_155; tmb1427_180
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	94\|94	cir0105_94; cir0105_94
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|186	cir0253_154; cir0253_186
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	142\|142	tmb2068_142; tmb2068_142
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	235\|235	bnl2570_235; bnl2570_235
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246	cir0347_236; cir0347_246
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	214\|227	cir0009_214; cir0009_227
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	140\|142	bnl0530_140; bnl0530_142
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	94\|94	bnl0409_94; bnl0409_94
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|170	dpl0196_135; dpl0196_170
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	139\|139	bnl1521_139; bnl1521_139
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|203\|226	tmb1640_196; tmb1640_200; tmb1640_203; tmb1640_226
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|228	dpl0541_206; dpl0541_228

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1391
GRIN	PI 415115

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 415115	GRIN:
NCGC Cotton Race Collection (USA)	TX-1391

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