MCU-5 (PI 694627)

Germplasm Overview


Name	MCU-5 (PI 694627)
Alias	PI 694627 [view all 5]
GRIN ID	PI 694627
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	higher level of resistance to the Australian races of fusarium wilt, extra-long staple, normal leaf shape, dense leaf trichome (603 ± 117/cm2), and yellow pollen color
Origin Country	N/A
Origin Detail	India
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 51]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	[view all 40721 ]
Comments	N/A
Reference	N/A

Alias


Synonym
SA 3256
SA-3256
VIR-6615 MCU-5
VIR-6615
PI 694627

Image


File Name	Legend	Dataset
SA-3256_CS12-3122_IMG_4816_L.jpg	[SA-3256] leaf, College Station Plot# 3121, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_3709_LB.jpg	[SA-3256] leaf close up of the back surface, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_6134_F.jpg	[SA-3256] flower, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_6135_FO.jpg	[SA-3256] flower open, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_7382_B.jpg	[SA-3256] green boll, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_7383_BO.jpg	[SA-3256] boll open, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)
SA-3256_CS12-3122_MG_7384_BN.jpg	[SA-3256] boll showing nectaries, College Station Plot# 3122, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 51 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	3122
2	NCGC germplasm evaluation, CS12	plot plant stand	1 plant	US_TX_CS_2012	3122
3	NCGC germplasm evaluation, CS12	productiveness	13-24 per plant	US_TX_CS_2012	3122
4	NCGC germplasm evaluation, T11	boll color	green	MX_CLM_TCM_2011	327
5	NCGC germplasm evaluation, T11	boll nectaries	reduced	MX_CLM_TCM_2011	327
6	NCGC germplasm evaluation, T11	boll pitting	pitted	MX_CLM_TCM_2011	327
7	NCGC germplasm evaluation, T11	boll point	pointed	MX_CLM_TCM_2011	327
8	NCGC germplasm evaluation, T11	boll shape	oval	MX_CLM_TCM_2011	327
9	NCGC germplasm evaluation, T11	bract nectaries	present	MX_CLM_TCM_2011	327
10	NCGC germplasm evaluation, T11	bract type	normal	MX_CLM_TCM_2011	327
11	NCGC germplasm evaluation, T11	leaf color	green	MX_CLM_TCM_2011	327
12	NCGC germplasm evaluation, T11	leaf gossypol glands	medium	MX_CLM_TCM_2011	327
13	NCGC germplasm evaluation, T11	leaf shape	normal	MX_CLM_TCM_2011	327
14	NCGC germplasm evaluation, T11	petal color	cream	MX_CLM_TCM_2011	327
15	NCGC germplasm evaluation, T11	petal spot	none	MX_CLM_TCM_2011	327
16	NCGC germplasm evaluation, T11	plant shape	normal	MX_CLM_TCM_2011	327
17	NCGC germplasm evaluation, T11	plot maturity	more than half open	MX_CLM_TCM_2011	327
18	NCGC germplasm evaluation, T11	pollen color	cream	MX_CLM_TCM_2011	327
19	NCGC germplasm evaluation, T11	stem gossypol glands	medium	MX_CLM_TCM_2011	327
20	NCGC germplasm evaluation, T11	stigma exsertion	normal	MX_CLM_TCM_2011	327
21	NCGC germplasm evaluation, T11	trichome density on leaf	moderate	MX_CLM_TCM_2011	327
22	NCGC germplasm evaluation, T11	trichome density on stem	moderate	MX_CLM_TCM_2011	327
23	NCGC germplasm evaluation, T11	plant height (m)	1.07	MX_CLM_TCM_2011	327
24	NCGC germplasm evaluation, T11	leaf nectaries	one, main vein	MX_CLM_TCM_2011	327
25	NCGC germplasm evaluation, T11	plot plant stand	1 plant	MX_CLM_TCM_2011	327

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	158\|176\|198	dpl0071_158; dpl0071_176; dpl0071_198
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	197\|197	bnl1673_197; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	212\|241	bnl3090_212; bnl3090_241
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	235\|235	cir0320_235; cir0320_235
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	116\|119\|125	dpl0249_116; dpl0249_119; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	192\|195	mghes0022_192; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	167\|167	bnl4028_167; bnl4028_167
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	141\|141	bnl1897_141; bnl1897_141
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|138\|142	dpl0570_126; dpl0570_138; dpl0570_142
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	160\|160	tmb1427_160; tmb1427_160
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	96\|96	cir0105_96; cir0105_96
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|186	cir0253_154; cir0253_186
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	149\|149	tmb2068_149; tmb2068_149
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	233\|233	bnl2570_233; bnl2570_233
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246	cir0347_236; cir0347_246
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	222\|227	cir0009_222; cir0009_227
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	138\|142	bnl0530_138; bnl0530_142
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	98\|98	bnl0409_98; bnl0409_98
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|166	dpl0196_135; dpl0196_166
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	170\|183	bnl1521_170; bnl1521_183
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|226	tmb1640_196; tmb1640_200; tmb1640_226
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|240	dpl0541_206; dpl0541_240

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Cross References

External references for this accession


Database	Accession
GRIN	PI 694627

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