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Marker Overview
Name | NAU1037 |
Genbank ID | BQ404554 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (CTGCCA)3 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1037_F: CACCTTCACCTAACCATCAA |
Primer 2 | NAU1037_R: GAAGAATTGCGAGAAGAGGA |
Product Length | 178 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch24_Dt.08 | N/A | 35.4 | NAU1037 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch08_At.08 | N/A | 88.2 | NAU1037 | View |
3 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch08_At.08 | N/A | 28.4 | NAU1037 | View |
4 | Hai-7124 x Junmian-1, F2 (2008) part | AD_ch08_At.08 | N/A | 48 | NAU1037 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch24_Dt.08 | N/A | 169 | NAU1037 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch08_At.08 | N/A | 67 | NAU1037 | View |
7 | TM-1 x 3-79, RIL (2012) | AD_ch08_At.08 | N/A | 86.43 | NAU1037 | View |
8 | Yumian-1 x T586, RIL (2006) | AD_ch08_At.08 | N/A | 25.1 | NAU1037 | View |
9 | DH962 x Jinmian-6, F2 (2009) | AD_ch08_At.08 | N/A | 23.4 | NAU1037 | View |
10 | DH962 x Jinmian-6, F2 (2009) | AD_ch08_At.08 | N/A | 23.4 | NAU1037 | View |
11 | 7235 x TM-1, F2:3 (2005) | AD_ch24_Dt.08 | N/A | 38 | NAU1037 | View |
12 | HS427-10 x TM-1, F2:3 (2005) | AD_ch08_At.08 | N/A | 19.3 | NAU1037 | View |
13 | PD6992 x SM3, F2:3 (2005) | AD_ch08_At.08 | N/A | 13.1 | NAU1037 | View |
14 | Yumian-1 x T586, RIL (2015) | AD_ch08_At.08 | N/A | 94 | NAU1037 | View |
15 | DH962 X Ji Mian 5, F2 (2015) | AD_ch08_At.08 | N/A | 17.7 | NAU1037 | View |
16 | TM-1 x 3-79, RIL (2014) | AD_ch08_At.08 | N/A | 96.8 | NAU1037 | View |
17 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch08_At.08 | N/A | 28.1 | NAU1037 | View |
18 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.08 | N/A | 73.1 | NAU1037 | View |
19 | DH962 x Ji Mian 5, RIL (2015) | AD_ch08_At.08 | N/A | 61.4 | NAU1037 | View |
20 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch08_At.08 | N/A | 31.5 | NAU1037 | View |
21 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch08_At.08 | N/A | 22.2 | NAU1037 | View |
22 | TM-1 x Hai-7124, BC1 (2007) | AD_ch08_At.08 | N/A | 74.2 | NAU1037-200 | View |
23 | TM-1 x Hai-7124, BC1 (2008) | AD_ch08_At.08 | N/A | 53.53 | NAU1037-200 | View |
24 | TM-1 x Hai-7124, BC1 (2012) | AD_ch08_At.08 | N/A | 79.9 | NAU1037-200 | View |
25 | Yumian-1 x T586, RIL (2009) | AD_ch08_At.08 | N/A | 36.7 | NAU1037/230t(C8) | View |
26 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch24_Dt.08 | N/A | 180.9 | NAU1037b | View |
27 | Yumian-1 x 7235, RIL (2015) | AD_ch08_At.08 | N/A | 35.9 | NAU1037b | View |
28 | TM-1 x 3-79, RIL (2011) | AD_ch08_At.08 | N/A | 14.9 | NAU1037_213/221 | View |
29 | Yumian-1 x 7235, RIL (2015) | AD_ch24_Dt.08 | N/A | 23.5 | NAU1037a | View |
30 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch08_At.08 | N/A | 90.11 | NAU1037 | View |
31 | TM-1 x 3-79, RIL (2012.v3) | AD_ch08_At.08 | N/A | 96.76 | NAU1037 | View |
Sequence
>NAU1037 ID=NAU1037; Name=NAU1037; organism=Gossypium arboreum; type=genetic_marker; length=178bp CACCTTCACCTAACCATCAAAAAGTAAAAAATTGCCAAACAAAAGCTATG GCATTTTTAAGGTCGCTGACCCCTGCCACTGCCACTGCCATAGCCGCTGC CTCTGCCTCTGCTCTGCCTGCCGCCTTTGTTTTCTCTTCTTCTTCTTCTT CTTCCTTCTCCTCTTCTCGCAATTCTTC
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