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Marker Overview
Name | CIR0383 |
Alias | CIR383
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Genbank ID | AJ567310 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567310
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Source Type | genomic |
Repeat Motif | (TG)8 |
PCR Condition | Annealing temperature: 51 |
Primer 1 | CIR383_F: ATTTCAATTTGCGATTTC |
Primer 2 | CIR383_R: CAACTTACATTTTATACACAC |
Product Length | 108 |
Polymorphism | P_ CIR0383 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch23_Dt.09 | N/A | 138.8 | CIR383 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch23_Dt.09 | N/A | 102.9 | CIR383 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch23_Dt.09 | N/A | 43.82 | CIR383 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch23_Dt.09 | N/A | 107.41 | CIR383 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch23_Dt.09 | N/A | 39.9 | CIR383 | View |
6 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch23_Dt.09 | N/A | 18.5 | CIR383 | View |
7 | Yumian-1 x T586, RIL (2015) | AD_ch23_Dt.09 | N/A | 10.5 | CIR383 | View |
8 | TM-1 x 3-79, RIL (2014) | AD_ch23_Dt.09 | N/A | 36.1 | CIR383 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 57 | cir0383 | View |
10 | Yumian-1 x T586, RIL (2009) | AD_ch09_At.09 | N/A | 38.5 | CIR383/110t(C23) | View |
11 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch23_Dt.09 | N/A | 80.96 | CIR383 | View |
12 | TM-1 x 3-79, RIL (2012.v3) | AD_ch23_Dt.09 | N/A | 36.14 | CIR383 | View |
13 | Yumian-1 x 7235, RIL (2015) | AD_ch23_Dt.09 | N/A | 14 | CIR383 | View |
Sequence
>CIR0383 ID=CIR0383; Name=CIR0383; organism=Gossypium hirsutum; type=genetic_marker; length=108bp ATTTCAATTTGCGATTTCATCAAATTTGTACTTTCACGCAATTGACAATC ATTGAGCTGAGGGTTTTATATATATATGTGTGTGTGTGTGTGTATAAAAT GTAAGTTG
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