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Marker Overview
Name | BNL2895 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2895_orig
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Source Type | genomic |
Repeat Motif | (GA)10 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2895_F: CGATTTTACTGCTTCAGACTTG |
Primer 2 | BNL2895_R: TACCATCTCACGGATCCACA |
Polymorphism | P_ BNL2895 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch11_At.11 | N/A | 0.1 | BNL2895 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch21_Dt.11 | N/A | 70.5 | BNL2895 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch21_Dt.11 | N/A | 170.67 | BNL2895 | View |
4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch11_At.11 | N/A | 79.15 | BNL2895 | View |
5 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 73.13 | BNL2895 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 24 | BNL2895 | View |
7 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 44 | BNL2895 | View |
8 | TM-1 x 3-79, RIL (2006) | AD_ch11_At.11 | N/A | 31.7 | BNL2895 | View |
9 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch11_At.11 | N/A | 159.2 | BNL2895 | View |
10 | Yumian-1 x T586, F2:7 (2008) | AD_ch11_At.11 | N/A | 11.8 | BNL2895 | View |
11 | Yumian-1 x T586, F2:3 (2005) | AD_chU | N/A | 4.1 | BNL2895 | View |
12 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 180 | BNL2895 | View |
13 | Yumian-1 x T586, RIL (2006) | AD_ch11_At.11 | N/A | 44.4 | BNL2895 | View |
14 | 7235 x TM-1, F2:3 (2005) | AD_ch11_At.11 | N/A | 11.3 | BNL2895 | View |
15 | Yumian-1 x T586, RIL (2015) | AD_ch11_At.11 | N/A | 65.1 | BNL2895 | View |
16 | Yumian-1 x 7235, RIL (2015) | AD_ch11_At.11 | N/A | 57.3 | BNL2895 | View |
17 | GX1135 x GX100-2, F2 (2013) | AD_ch11_At.11 | N/A | 0.6 | BNL2895 | View |
18 | Emian-22 x 3-79, BC1 (2015) | AD_ch21_Dt.11 | N/A | 162.9 | BNL2895 | View |
19 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 16.9 | BNL2895 | View |
20 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch11_At.11 | N/A | 92.6 | BNL2895b | View |
21 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch21_Dt.11 | N/A | 26.9 | BNL2895b | View |
22 | TM-1 x 3-79, RIL (2012) | AD_ch11_At.11 | N/A | 104.35 | BNL2895b | View |
23 | TM-1 x 3-79, RIL (2014) | AD_ch11_At.11 | N/A | 108.1 | BNL2895b | View |
24 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 101 | BNL2895b | View |
25 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch21_Dt.11 | N/A | 109.5 | BNL2895a | View |
26 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch18_Dt.13 | N/A | 98.1 | BNL2895a | View |
27 | TM-1 x 3-79, RIL (2012) | AD_ch21_Dt.11 | N/A | 91.36 | BNL2895a | View |
28 | TM-1 x 3-79, RIL (2014) | AD_ch21_Dt.11 | N/A | 93.2 | BNL2895a | View |
29 | Monsanto SSR Bin Map, (2009) | AD_ch21_Dt.11 | N/A | 101 | BNL2895a | View |
30 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 74.6 | BNL2895-215 | View |
31 | TM-1 x Hai-7124, BC1 (2007) | AD_ch21_Dt.11 | N/A | 78.9 | BNL2895-215 | View |
32 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch21_Dt.11 | N/A | 215.5 | BNL2895-215 | View |
33 | TM-1 x Hai-7124, BC1 (2008) | AD_ch21_Dt.11 | N/A | 72.55 | BNL2895-215 | View |
34 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch11_At.11 | N/A | 74.9 | BNL2895-215 | View |
35 | TM-1 x Hai-7124, BC1 (2012) | AD_ch21_Dt.11 | N/A | 107.1 | BNL2895-215 | View |
36 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 73.21 | BNL2895-216 | View |
37 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 88.8 | BNL2895-216 | View |
38 | Yumian-1 x T586, RIL (2009) | AD_ch11_At.11 | N/A | 43.6 | BNL2895/210y(C11,C21) | View |
39 | Yumian-1 x T586, F2:3 (2005.v0) | AD_chU | N/A | 4.1 | BNL2895(C5,C18,A03,D02) | View |
40 | TM-1 x 3-79, RIL (2012.v3) | AD_ch11_At.11 | N/A | 108.08 | BNL2895b | View |
41 | TM-1 x 3-79, RIL (2012.v3) | AD_ch21_Dt.11 | N/A | 93.18 | BNL2895a | View |
Sequence
>BNL2895 ID=BNL2895; Name=BNL2895; organism=Gossypium hirsutum; type=genetic_marker; length=207bp CGATTTTACTGCTTCAGACTTGAGAGAGAGAGAGAGAGAGAGGCAATATT TAAGATTTCCCACGGGTTTGGCTTTGGAATGAAGTTACTTATTAGCTTTT GTCTTCTTCTTCTTCTTTTTTTTTTTTATTAGATACGTGTTTTGCTTGTT ATATTTGTACCTGTGGACACCTCTCTACAAAAATAAATGTGGATCCGTGA GATGGTA
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