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Marker Overview
Name | BNL1414 |
Alias | MAS-L11
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL1414_orig
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Source Type | genomic |
Repeat Motif | (AG)16 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL1414_F: AAAAACCCCTTTCCATCCAT |
Primer 2 | BNL1414_R: GGGTGTCCTTCCCAAAAATT |
Polymorphism | P_ BNL1414 |
Publication | [view all] |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch23_Dt.09 | N/A | 103.8 | BNL1414 | View |
2 | 7235 x TM-1, RIL (2007) | AD_ch23_Dt.09 | N/A | 23.8 | BNL1414 | View |
3 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch09_At.09 | N/A | 54.2 | BNL1414 | View |
4 | Emian-22 x 3-79, BC1 (2011) | AD_ch09_At.09 | N/A | 122.47 | BNL1414 | View |
5 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch23_Dt.09 | N/A | 100.34 | BNL1414 | View |
6 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch09_At.09 | N/A | 87.42 | BNL1414 | View |
7 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch09_At.09 | N/A | 24.6 | BNL1414 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 147 | BNL1414 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch09_At.09 | N/A | 155 | BNL1414 | View |
10 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch09_At.09 | N/A | 54.8 | BNL1414 | View |
11 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch23_Dt.09 | N/A | 61.5 | BNL1414 | View |
12 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch09_At.09 | N/A | 108.5 | BNL1414 | View |
13 | 7235 x TM-1, F2:3 (2005) | AD_ch23_Dt.09 | N/A | 25.7 | BNL1414 | View |
14 | PD6992 x SM3, F2:3 (2005) | AD_ch23_Dt.09 | N/A | 24.2 | BNL1414 | View |
15 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch23_Dt.09 | N/A | 56.3 | BNL1414 | View |
16 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch09_At.09 | N/A | 122.8 | BNL1414 | View |
17 | LMY22 x LY343, RIL (2020) | D09 | N/A | 22.46 | BNL1414 | View |
18 | Deltapine x Giza-83, F2 (2008) | AD_chU | N/A | 91.1 | MAS-L11-150 | View |
19 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch09_At.09 | N/A | 215.5 | BNL1414b | View |
20 | TM-1 x 3-79, RIL (2012) | AD_ch23_Dt.09 | N/A | 54.88 | BNL1414b | View |
21 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch23_Dt.09 | N/A | 121.7 | BNL1414b | View |
22 | TM-1 x 3-79, RIL (2014) | AD_ch23_Dt.09 | N/A | 90.7 | BNL1414b | View |
23 | SG 747 x Giza 75, BIL (2013) | AD_ch23_Dt.09 | N/A | 124 | BNL1414b | View |
24 | Monsanto SSR Bin Map, (2009) | AD_ch23_Dt.09 | N/A | 41 | BNL1414b | View |
25 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch09_At.09 | N/A | 109.8 | BNL1414a | View |
26 | TM-1 x 3-79, RIL (2012) | AD_ch09_At.09 | N/A | 51.93 | BNL1414a | View |
27 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch23_Dt.09 | N/A | 174.4 | BNL1414a | View |
28 | TM-1 x 3-79, RIL (2014) | AD_ch09_At.09 | N/A | 88.7 | BNL1414a | View |
29 | SG 747 x Giza 75, BIL (2013) | AD_ch09_At.09 | N/A | 63.9 | BNL1414a | View |
30 | Monsanto SSR Bin Map, (2009) | AD_ch09_At.09 | N/A | 41 | BNL1414a | View |
31 | TM-1 x Hai-7124, BC1 (2007) | AD_ch09_At.09 | N/A | 96.5 | BNL1414-135 | View |
32 | TM-1 x Hai-7124, BC1 (2008) | AD_ch09_At.09 | N/A | 97.05 | BNL1414-135 | View |
33 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch09_At.09 | N/A | 91 | BNL1414-135 | View |
34 | TM-1 x Hai-7124, BC1 (2012) | AD_ch09_At.09 | N/A | 95.8 | BNL1414-135 | View |
35 | TM-1 x Hai-7124, BC1 (2007) | AD_ch23_Dt.09 | N/A | 124 | BNL1414-175 | View |
36 | TM-1 x Hai-7124, BC1 (2008) | AD_ch23_Dt.09 | N/A | 123.55 | BNL1414-175 | View |
37 | TM-1 x Hai-7124, BC1 (2012) | AD_ch23_Dt.09 | N/A | 120.2 | BNL1414-175 | View |
38 | TM-1 x 3-79, RIL (2012.v3) | AD_ch09_At.09 | N/A | 88.71 | BNL1414a | View |
39 | TM-1 x 3-79, RIL (2012.v3) | AD_ch23_Dt.09 | N/A | 90.7 | BNL1414b | View |
40 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch09_At.09 | N/A | 134.4 | BNL1414b | View |
41 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch23_Dt.09 | N/A | 165.7 | BNL1414a | View |
Sequence
>BNL1414 ID=BNL1414; Name=BNL1414; organism=Gossypium hirsutum; type=genetic_marker; length=139bp AAAAACCCCTTTCCATCCATAGAACGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAATGCAATATGATTTACAGTGTGAAGTATATGTTTGGTTGCGGG GAAACCGAAGCAAAATAAAAATTTTTGGGAAGGACACCC
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