Rex

Germplasm Overview


Name	Rex
Alias	NSSL 29184 [view all 5]
GRIN ID	PI 529140
Type	Obsolete Cultivar
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 44]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	MAFES-1155-57

Alias


Synonym
NSSL 29184
PI 529140
SA 1071
SA-1071
NSL 29184

Image


File Name	Legend	Dataset
SA-1071_CS12-2014_IMG_4123_L.jpg	[SA-1071] leaf, College Station Plot# 2013, 2012	NCGC digital imaging (College Station, 2012)
SA-1071_CS12-2014_MG_2945_LB.jpg	[SA-1071] leaf close up of the back surface, College Station Plot# 2014, 2012	NCGC digital imaging (College Station, 2012)
SA-1071_CS12-2014_MG_6137_B.jpg	[SA-1071] green boll, College Station Plot# 2014, 2012	NCGC digital imaging (College Station, 2012)
SA-1071_CS12-2014_MG_6138_BO.jpg	[SA-1071] boll open, College Station Plot# 2014, 2012	NCGC digital imaging (College Station, 2012)
SA-1071_CS12-2014_MG_6139_BN.jpg	[SA-1071] boll showing nectaries, College Station Plot# 2014, 2012	NCGC digital imaging (College Station, 2012)
145_pedigree15.jpg	Pedigree-Figure 15. Development of Missouri lines and cultivars. [Image from Calhoun et al., 1994, BAMS-1994-B1017]	n/a

Phenotypic Data

Total 44 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	plant shape	normal	US_TX_CS_2012	2014
2	NCGC germplasm evaluation, CS12	plot maturity	complete	US_TX_CS_2012	2014
3	NCGC germplasm evaluation, CS12	population homogeneity	uniform	US_TX_CS_2012	2014
4	NCGC germplasm evaluation, CS12	seed fuzz grade	high	US_TX_CS_2012	2014
5	NCGC germplasm evaluation, CS12	stem color	sun red	US_TX_CS_2012	2014
6	NCGC germplasm evaluation, CS12	stem gossypol glands	medium	US_TX_CS_2012	2014
7	NCGC germplasm evaluation, CS12	stigma exsertion	normal	US_TX_CS_2012	2014
8	NCGC germplasm evaluation, CS12	trichome density on leaf	moderate	US_TX_CS_2012	2014
9	NCGC germplasm evaluation, CS12	trichome density on stem	moderate	US_TX_CS_2012	2014
10	NCGC germplasm evaluation, CS12	plant height (m)	0.76	US_TX_CS_2012	2014
11	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	2014
12	NCGC germplasm evaluation, CS12	plot plant stand	2 plants	US_TX_CS_2012	2014
13	NCGC germplasm evaluation, CS12	productiveness	13-24 per plant	US_TX_CS_2012	2014
14	NCGC germplasm evaluation, T04	E1 (%)	6.2	MX_CLM_TCM_2004	920
15	NCGC germplasm evaluation, T04	FUI (%)	84.2	MX_CLM_TCM_2004	920
16	NCGC germplasm evaluation, T04	MIC (unit)	4.8	MX_CLM_TCM_2004	920
17	NCGC germplasm evaluation, T04	SFC HVI (%)	3.4	MX_CLM_TCM_2004	920
18	NCGC germplasm evaluation, T04	T1 (g/tex)	23.5	MX_CLM_TCM_2004	920
19	NCGC germplasm evaluation, T04	UHML (inch)	1.1	MX_CLM_TCM_2004	920

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	x\|x	dpl0071_x; dpl0071_x
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	197\|197	bnl1673_197; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	x\|x	bnl3090_x; bnl3090_x
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	235\|235	cir0320_235; cir0320_235
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	116\|119\|125	dpl0249_116; dpl0249_119; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	192\|195	mghes0022_192; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	167\|183	bnl4028_167; bnl4028_183
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	141\|141	bnl1897_141; bnl1897_141
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|142	dpl0570_126; dpl0570_142
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	x\|x	tmb1427_x; tmb1427_x
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	x\|x	cir0105_x; cir0105_x
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|186	cir0253_154; cir0253_186
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	149\|149	tmb2068_149; tmb2068_149
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	235\|235	bnl2570_235; bnl2570_235
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|248	cir0347_236; cir0347_248
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	x\|x	cir0009_x; cir0009_x
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	138\|142	bnl0530_138; bnl0530_142
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	98\|98	bnl0409_98; bnl0409_98
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|166	dpl0196_135; dpl0196_166
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	x\|x	bnl1521_x; bnl1521_x
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|226	tmb1640_196; tmb1640_200; tmb1640_226
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	x\|x	dpl0541_x; dpl0541_x

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Publications


Year	Publication
2006	Bowman DT, Gutierrez OA, Percy RG, Calhoun SD, May LO. Pedigrees of Upland and Pima Cotton Cultivars Released Between 1970 and 2005. Bulletin of Mississippi Agricultural & Forestry Experiment Station. 2005, 1155:57.

Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Last

Cross References

External references for this accession


Database	Accession
GRIN	PI 529140

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 529140	GRIN:

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