Gohir.D04G043300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Gohir.D04G043300.1 vs. Araport11
Match: AT5G39200.1 (| Symbols: no symbol available | no full name available | chr5:15694307-15695042 REVERSE LENGTH=201) HSP 1 Score: 65.4698 bits (158), Expect = 2.450e-12 Identity = 71/250 (28.40%), Postives = 100/250 (40.00%), Query Frame = 0 Query: 86 DKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPM-NCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSP----QNGSSRSWFSWFSCCRC 330 D++ K Y P+RIP SVF+ +WS SNESLFSIH+G+ SFSK +YKSGELT + A + +D+ A T A T EV + PK + + N P K P ++ I P +C S S +S + SF FP L G +QQ++ E K ++++ + P Q G+ W SCC C Sbjct: 2 DQETKPGYEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK-----MYKSGELTNF--EYTASPYISYYNNNIDNKIA------------PTDAGTKEVNITMVETGPKTGN---RDGLTNVP-------------KPDPRQQIPISPTKSCHSETSNNS--TTSFAFPTL------------------GEYQQERKTSLNTKSESGKRELSRLDSKTGLYPDDSKQGGAGAGAGGWLSCCLC 196
BLAST of Gohir.D04G043300.1 vs. Araport11
Match: AT3G02125.1 (| Symbols: no symbol available | no full name available | chr3:378205-379382 FORWARD LENGTH=355) HSP 1 Score: 62.003 bits (149), Expect = 1.452e-10 Identity = 79/272 (29.04%), Postives = 120/272 (44.12%), Query Frame = 0 Query: 93 YVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDE--QIIAQKNVLPSLK--------ELDDMAAMD----ENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMN-CMSSLSEDSNISI-SFTFPVLTATDG-GRLSSVYADQNIKGSHQQQQPLPQQPL---EEEKKEFTEEK---EAQSPVSPQNGSSRSWFS-----------WFSCCRC 330 Y P RIPSSVFS KP +WS ASNESLFSIH GN S S + E+ + +E +I + N +P E + +A + EN+ D + K +EV D H E + +E ++ V+ V + KP I+ + +S S+ SN SI SF FP+L D + S+ N+ + + LPQ + +++ + ++E E+Q PQ +S+ + S WFSC C Sbjct: 89 YDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGNFSIS-----TALRLAEIPRFEETVHVITEINSVPLPPPVKKPNEYEKETIAEKEPYQVENSNSDIEDNEEEEKMSEVESDDEHEEEQTDMIEAEALVEKE--------VIETVKENKPEDSNSIVSHSPSISCRSDTSNNSIGSFAFPLLQKEDAVTKTPSMQIKGNVSHKRRPEYQLPQSRMLQPQQQLQPYSESNMLTESQPEPQPQRKASKKFESRTQSLKASRTCWFSCFHC 347
BLAST of Gohir.D04G043300.1 vs. Araport11
Match: AT2G03630.2 (| Symbols: no symbol available | no full name available | chr2:1103205-1103863 FORWARD LENGTH=198) HSP 1 Score: 60.077 bits (144), Expect = 1.739e-10 Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 0 Query: 86 DKQEKQVYVPNRIPSSVFSE-KPATPMDWSTASNESLFSIHVGNGSFSKDQFFM-----LYKSGEL 145 D+ Y PNRIPSSVF K P +WS SNESLFSIH+GN SF+ + LYKSGEL Sbjct: 98 DRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFTGYGGDLMKSGELYKSGEL 163
BLAST of Gohir.D04G043300.1 vs. Araport11
Match: AT1G74220.1 (| Symbols: no symbol available | no full name available | chr1:27913099-27914134 REVERSE LENGTH=316) HSP 1 Score: 59.6918 bits (143), Expect = 8.032e-10 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0 Query: 97 RIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELT 146 RIPS VF+ +T +WST SNESLFSIH+GN SF+ +F KSGELT Sbjct: 89 RIPSHVFARTTSTAPEWSTISNESLFSIHMGNNSFTGGDYF---KSGELT 135
BLAST of Gohir.D04G043300.1 vs. Araport11
Match: AT2G03630.1 (| Symbols: no symbol available | no full name available | chr2:1103205-1104230 FORWARD LENGTH=310) HSP 1 Score: 56.225 bits (134), Expect = 9.842e-9 Identity = 68/239 (28.45%), Postives = 99/239 (41.42%), Query Frame = 0 Query: 93 YVPNRIPSSVFSE-KPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNV-LPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLT--ATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSC 327 Y PNRIPSSVF K P +WS SNESLFSIH+GN SF+ L KSGEL K E + + +P + + ++E +S E V V E H+ S + + P V K PT + SN + SF+FP+L A+D ++ + E++K++ + +E+Q PV+ +S FSC Sbjct: 105 YDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFT-GYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVVEEPKVVESDKEEKVVL---VEETHTSSSDEEEGKRESHEKEQHPAVSW----------KTPTT---------SYRSNRSSNSAHSFSFPILAGAASDSRKVET----------------------EKQKEQANQSQESQKPVADATNQKQSMCRCFSC 298
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G051300v1 PE=4 SV=1) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein LOC107934332 OS=Gossypium hirsutum OX=3635 GN=LOC107934332 PE=4 SV=1) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G048000v1 PE=4 SV=1) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 330/331 (99.70%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVD+SPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDSSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium tomentosum OX=34277 GN=ES332_D04G051100v1 PE=4 SV=1) HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0 Identity = 329/331 (99.40%), Postives = 329/331 (99.40%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSP KVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENT KDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPIKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTTKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_002380 PE=4 SV=1) HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0 Identity = 328/331 (99.09%), Postives = 329/331 (99.40%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGE SSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPK+VRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAE EVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEESSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKEVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEAEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium davidsonii OX=34287 GN=Godav_002320 PE=4 SV=1) HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0 Identity = 328/331 (99.09%), Postives = 329/331 (99.40%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGE SSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPK+VRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAE EVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEESSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKEVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEAEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G049100v1 PE=4 SV=1) HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0 Identity = 328/331 (99.09%), Postives = 329/331 (99.40%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAE EVQSSVDNSPIVDHSAAVG+LSLKKKPTAEVK LPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEAEVQSSVDNSPIVDHSAAVGSLSLKKKPTAEVKNLPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium trilobum OX=34281 GN=Gotri_002263 PE=4 SV=1) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 328/331 (99.09%), Postives = 328/331 (99.09%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 M SGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAE EVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVK LPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MVSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEAEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKNLPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium raimondii OX=29730 GN=B456_012G048600 PE=4 SV=1) HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0 Identity = 326/331 (98.49%), Postives = 327/331 (98.79%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNN SNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKM E EVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVK LPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPL+EEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNGSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMTEAEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKNLPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLDEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331
BLAST of Gohir.D04G043300.1 vs.
Match: Uncharacterized (protein OS=Gossypium gossypioides OX=34282 GN=Gogos_001846 PE=4 SV=1) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 326/331 (98.49%), Postives = 328/331 (99.09%), Query Frame = 0 Query: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSHGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSELKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMAEVEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKILPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSS GSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKS+LKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVA+DHSHSEPKMAE EVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVK LPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS Sbjct: 1 MGSGHEFNEEGEGSSKHYLTDYEVNLNEIKPLSSLGSSDSYSSSGSGSSQDLFDFLGNNDSNDDHTGKSQLKSPKKVRVSFASSTDKQEKQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLDEQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAQDHSHSEPKMAEAEVQSSVDNSPIVDHSAAVGNLSLKKKPTAEVKNLPMNCMSSLSEDSNISISFTFPVLTATDGGRLSSVYADQNIKGSHQQQQPLPQQPLEEEKKEFTEEKEAQSPVSPQNGSSRSWFSWFSCCRCS 331 The following BLAST results are available for this feature:
BLAST of Gohir.D04G043300.1 vs. Araport11
Analysis Date: 2025-04-01 (BLASTP of UTX v3.1 Gossypium hirsutum 'TM-1' proteins vs arabidopsis Araport11) Total hits: 5
BLAST of Gohir.D04G043300.1 vs. Araport11
Analysis Date: 2025-04-01 (BLASTP of UTX v3.1 Gossypium hirsutum 'TM-1' proteins vs UniProt Swissprot) Total hits: 0
BLAST of Gohir.D04G043300.1 vs.
Analysis Date: 2025-04-01 (BLASTP of UTX v3.1 Gossypium hirsutum 'TM-1' proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for UTX v3.1 Gossypium hirsutum 'TM-1' proteins
Date Performed: 2025-04-01
Sequences
The
following sequences are available for this feature:
mRNA sequence >ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1 ID=ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1; Name=Gohir.D04G043300.1; organism=Gossypium hirsutum; type=mRNA; length=1356bpback to top protein sequence of ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1 >ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1 ID=ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1; Name=ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1; organism=Gossypium hirsutum; type=polypeptide; length=332bpback to top mRNA from alignment at D04:6977046..6978722- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1 ID=ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1; Name=Gohir.D04G043300.1; organism=Gossypium hirsutum; type=mRNA; length=1677bp; location=Sequence derived from: D04:6977046..6978722- (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at D04:6977046..6978722- >ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1 ID=ddGosHirs.TM-1.UTX.v3.1.Gohir.D04G043300.1.v3.1; Name=Gohir.D04G043300.1; organism=Gossypium hirsutum; type=CDS; length=996bp; location=Sequence derived from: D04:6977046..6978722- (Gossypium hirsutumback to top |