|
Marker Overview
Name | TMB2386 |
Alias | TMB200-1-M9
|
Genbank ID | BV679753 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | TM-1 |
Source Sequence | BV679753.1
|
Source Type | genomic |
Repeat Motif | (TTA)10 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | TMB2386_F: GAAGAGTCGAAATAAAAATACCACAA |
Primer 2 | TMB2386_R: ACGGTGCAAACAGGTGAAGT |
Product Length | 152 |
Contact | Yu, John Z. (Zhi-Hong)
|
Comment | Primer data obtained in 2005-10 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch02_At.02 | N/A | 51.47 | TMB2386a | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch14_Dt.02 | N/A | 92.42 | TMB2386c | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch24_Dt.08 | N/A | 79.92 | TMB2386b | View |
4 | Emian-22 x 3-79, BC1 (2015) | AD_ch24_Dt.08 | N/A | 187 | TMB2386b | View |
5 | TM-1 x 3-79, RIL (2012) | AD_ch02_At.02 | N/A | 89.84 | tmb2386 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 162 | tmb2386 | View |
7 | TM-1 x 3-79, RIL (2014) | AD_ch02_At.02 | N/A | 91.4 | tmb2386 | View |
8 | GX1135 x GX100-2, F2 (2013) | AD_ch02_At.02 | N/A | 28.9 | tmb2386 | View |
9 | GX1135 x GX100-2, RIL (2015) | AD_ch02_At.02 | N/A | 53.9 | tmb2386 | View |
10 | GX1135 x GX100-2, RIL (2016) | AD_ch02_At.02 | N/A | 53.9 | tmb2386 | View |
11 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch02_At.02 | N/A | 58.6 | tmb2386 | View |
12 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch14_Dt.02 | N/A | 24.7 | tmb2386 | View |
13 | TM-1 x 3-79, RIL (2012.v3) | AD_ch02_At.02 | N/A | 91.39 | TMB2386 | View |
Sequence
>TMB2386 ID=TMB2386; Name=TMB2386; organism=Gossypium hirsutum; type=genetic_marker; length=152bp GAAGAGTCGAAATAAAAATACCACAAAGTTAAAAAAGGTAACATTTTATT GTTTATTGTTTATTATTATTATTATTATTATTATTATTATTTTGATTTTT CTCTTTTTGAAACAAAAAATAAAAAAGGAGAAACTTCACCTGTTTGCACC GT
|