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Marker Overview
Name | TMB0327 |
Alias | TME12
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Genbank ID | BV679341 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | TM-1 |
Source Sequence | BV679341.1
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Source Type | genomic |
Repeat Motif | (GAA)8 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | TMB0327_F: GCAATGTCTTTTTCGATTGC |
Primer 2 | TMB0327_R: CCATGAGTGCAAGAAGGCTTA |
Product Length | 148 |
Contact | Yu, John Z. (Zhi-Hong)
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Comment | Primer data obtained in 2005-10 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch12_At.12 | N/A | 0 | TME12 | View |
2 | HS427-10 x TM-1, F2:3 (2005) | AD_ch12_At.12 | N/A | 0 | TME12 | View |
3 | TM-1 x 3-79, RIL (2012) | AD_ch12_At.12 | N/A | 48.67 | tmb0327 | View |
4 | Yumian-1 x T586, F2:7 (2008) | AD_ch12_At.12 | N/A | 0 | tmb0327 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch12_At.12 | N/A | 192 | tmb0327 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch12_At.12 | N/A | 11 | tmb0327 | View |
7 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch12_At.12 | N/A | 120 | tmb0327 | View |
8 | Yumian-1 x T586, RIL (2015) | AD_ch12_At.12 | N/A | 31.9 | tmb0327 | View |
9 | Yumian-1 x 7235, RIL (2015) | AD_ch12_At.12 | N/A | 95.4 | tmb0327 | View |
10 | TM-1 x 3-79, RIL (2014) | AD_ch12_At.12 | N/A | 48.7 | tmb0327 | View |
11 | GX1135 x VGX100-2, RIL (2016) | AD_ch12_At.12 | N/A | 50.7 | tmb0327 | View |
12 | TM-1 x Hai-7124, BC1 (2007) | AD_ch12_At.12 | N/A | 25.8 | TME12-150 | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch12_At.12 | N/A | 60.03 | TME12-150 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch12_At.12 | N/A | 18.5 | TME12-150 | View |
15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch12_At.12 | N/A | 63.7 | TME12-150 | View |
16 | Yumian-1 x T586, RIL (2009) | AD_ch12_At.12 | N/A | 0 | TMB0327/170y(C12) | View |
17 | TM-1 x 3-79, RIL (2012.v3) | AD_ch12_At.12 | N/A | 48.67 | TMB0327 | View |
Sequence
>TMB0327 ID=TMB0327; Name=TMB0327; organism=Gossypium hirsutum; type=genetic_marker; length=148bp GCAATGTCTTTTTCGATTGCTCCGAAGAAGAAGAAGAAGAAGAAGAAGTT CAAGAAAGCTTTGCATGAGGTGGTAAATATGAGATTCAATTTTGGAAAGT AGAGAATTTTATAAGCTGGTAAGCCTTTAAGCCTTCTTGCACTCATGG
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