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Marker Overview
Name | NAU2477 |
Alias | NAU2477=NAU2162 NAU2162
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Genbank ID | DT052869 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Xuzhou 142 Xuzhou 142
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Source Sequence | DT052869.1
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Source Type | EST |
Repeat Motif | AT(10) |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2477_F: CACGAGTGTCCTTGCTACAG |
Primer 2 | NAU2477_R: ACACAAAAACCCAAAGGAAA |
Product Length | 212 |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch22_Dt.04 | N/A | 47.3 | NAU2477a | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch04_At.04 | N/A | 77.6 | NAU2477a | View |
3 | Yumian-1 x T586, RIL (2015) | AD_ch04_At.04 | N/A | 60.2 | NAU2477a | View |
4 | TM-1 x 3-79, RIL (2014) | AD_ch04_At.04 | N/A | 78.2 | NAU2477a | View |
5 | AD-genome wide Reference Map (2009) | AD_ch04_At.04 | N/A | 30 | nau2477 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch22_Dt.04 | N/A | 69 | nau2477 | View |
7 | Yumian-1 x T586, RIL (2006) | AD_ch04_At.04 | N/A | 23.1 | nau2477 | View |
8 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch22_Dt.04 | N/A | 30.2 | nau2477 | View |
9 | Yumian-1 x 7235, RIL (2015) | AD_ch22_Dt.04 | N/A | 67.2 | nau2477 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch22_Dt.04 | N/A | 30.1 | nau2477 | View |
11 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch04_At.04 | N/A | 36 | nau2477 | View |
12 | TM-1 x 3-79, RIL (2012) | AD_ch22_Dt.04 | N/A | 48.41 | NAU2477b | View |
13 | Yumian-1 x T586, RIL (2015) | AD_ch22_Dt.04 | N/A | 70.2 | NAU2477b | View |
14 | TM-1 x 3-79, RIL (2014) | AD_ch22_Dt.04 | N/A | 81.9 | NAU2477b | View |
15 | TM-1 x Hai-7124, BC1 (2007) | AD_ch04_At.04 | N/A | 84.3 | NAU2477-200 | View |
16 | TM-1 x Hai-7124, BC1 (2008) | AD_ch04_At.04 | N/A | 82.12 | NAU2477-200 | View |
17 | TM-1 x Hai-7124, BC1 (2012) | AD_ch04_At.04 | N/A | 43.4 | NAU2477-200 | View |
18 | TM-1 x Hai-7124, BC1 (2007) | AD_ch22_Dt.04 | N/A | 68.6 | NAU2477-205 | View |
19 | TM-1 x Hai-7124, BC1 (2008) | AD_ch22_Dt.04 | N/A | 68.98 | NAU2477-205 | View |
20 | TM-1 x Hai-7124, BC1 (2012) | AD_ch22_Dt.04 | N/A | 52.8 | NAU2477-205 | View |
21 | Yumian-1 x T586, RIL (2009) | AD_ch04_At.04 | N/A | 17.7 | NAU2477/200t(C4,C22) | View |
22 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch04_At.04 | N/A | 84.03 | NAU2477 | View |
23 | TM-1 x 3-79, RIL (2012.v3) | AD_ch04_At.04 | N/A | 78.16 | NAU2477a | View |
24 | TM-1 x 3-79, RIL (2012.v3) | AD_ch22_Dt.04 | N/A | 81.94 | NAU2477b | View |
25 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch22_Dt.04 | N/A | 105.7 | NAU2477 | View |
Sequence
>NAU2477 ID=NAU2477; Name=NAU2477; organism=Gossypium hirsutum; type=genetic_marker; length=212bp CACGAGTGTCCTTGCTACAGAGATAAGGTGAACAACAAGGGCAAACCCAA ATGCCCTTGAAAATGAAATATATTCGAGTTCGGGATTTAATCAAGCTTAA AGATCGAGGACGAAGAGGCCATATATATATATATATATATGCATGTTGAT GATGATGTTATTATAAAAATAAACTTGTTTTGTTGCTGTTATTTTCCTTT GGGTTTTTGTGT
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