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Marker Overview
| Name | HAU1455 |
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| Alias | TA39516_3635
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium spp. |
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| Source Type | EST |
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| Repeat Motif | (AAAG)4+(GAA)6 |
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| PCR Condition | Annealing temperature: 57.0 |
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| Primer 1 | HAU1455_F: GAAGGTCAATCCAAGGTGTC |
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| Primer 2 | HAU1455_R: TGGCTCCTAGTTGTTTTTCC |
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| Product Length | 259 |
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| Publication | [view all] |
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| Comment | Primer data obtained in 2012 |
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Alignments
The following features are aligned
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch14_Dt.02 | N/A | 63.49 | HAU1455 | View |
| 2 | Yumian-1 x 7235, RIL (2015) | AD_ch03_At.03 | N/A | 83.2 | HAU1455 | View |
| 3 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch03_At.03 | N/A | 88.3 | HAU1455 | View |
| 4 | GX1135 x GX100-2, F2 (2013) | AD_ch14_Dt.02 | N/A | 72.7 | HAU1455 | View |
| 5 | GX1135 x GX100-2, RIL (2016) | AD_ch14_Dt.02 | N/A | 74.3 | HAU1455 | View |
| 6 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch03_At.03 | N/A | 36.1 | HAU1455 | View |
| 7 | Yumian-1 x T586, RIL (2015) | AD_ch14_Dt.02 | N/A | 80.6 | HAU1455a | View |
| 8 | 0-153 x sGK9708, RIL (2016) | AD_ch14_Dt.02 | N/A | 52.6 | HAU1455a | View |
| 9 | Yumian-1 x T586, RIL (2015) | AD_ch03_At.03 | N/A | 54.4 | HAU1455b | View |
| 10 | 0-153 x sGK9708, RIL (2016) | AD_ch14_Dt.02 | N/A | 54.5 | HAU1455b | View |
| 11 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch03_At.03 | N/A | 45.27 | HAU1455 | View |
Sequence
>HAU1455 ID=HAU1455; Name=HAU1455; organism=Gossypium spp.; type=genetic_marker; length=259bp
GAAGGTCAATCCAAGGTGTCAGTACATGAAAAAAAAGAAAGAAAGAAAGA
AGAAGACATTTTGAAGCTGTAGAAGGAAGAAGAAGAAGAAGAAAGAAGGG
GTTTTGGGGGGGGTCATTCGTAGGGTGTTTTTCGAGAGCATTGGAAATGG
TGGCGAGAGAGTGAGGAAGTCAAGAAAGTTTACTTAGAAGGGTGATGTTG
TGTTGGATGGATTATTTGGTGGGAGCCTCATTTCCAAAGGGAAAAACAAC
TAGGAGCCA
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