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Marker Overview
Name | CIR0194 |
Alias | CIR194
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Genbank ID | AJ567141 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567141
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Source Type | genomic |
Repeat Motif | (CA)7 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CIR194_F: ATTGTCTTGGACTTTGGT |
Primer 2 | CIR194_R: TCAGTTGAAAGTATTCCCT |
Product Length | 139 |
Polymorphism | P_ CIR0194 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch23_Dt.09 | N/A | 100.6 | CIR194 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch23_Dt.09 | N/A | 67.8 | CIR194 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch23_Dt.09 | N/A | 102.54 | CIR194 | View |
4 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch23_Dt.09 | N/A | 61.5 | CIR194 | View |
5 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch23_Dt.09 | N/A | 174.4 | CIR194 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch23_Dt.09 | N/A | 28.1 | CIR194 | View |
7 | Yumian-1 x T586, RIL (2015) | AD_ch23_Dt.09 | N/A | 68.9 | CIR194 | View |
8 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch23_Dt.09 | N/A | 34.2 | CIR194 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 147 | cir0194 | View |
10 | Yumian-1 x T586, RIL (2009) | AD_ch23_Dt.09 | N/A | 28.1 | CIR194/190y(C23) | View |
11 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch23_Dt.09 | N/A | 157.35 | CIR194 | View |
Sequence
>CIR0194 ID=CIR0194; Name=CIR0194; organism=Gossypium hirsutum; type=genetic_marker; length=139bp ATTGTCTTGGACTTTGGTCAGTGTTCTTGCACACACACACACACTTTTTT TCAAAATATTATTTTAAAGCTTCTTTGATGGTAAAAAAGAATCTTGTTGA TTTCTTTTACTCTCTTCTATAGGGAATACTTTCAACTGA
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