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Marker Overview
Name | CGR5578 |
Genbank ID | GQ393575 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 33 B |
Source Sequence | MONCS0540
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Source Type | genomic |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CGR5578_F: ACCACCCGATACCCAAAGAT |
Primer 2 | CGR5578_R: GTGCCGCCACTGGTAAACT |
Publication | [view all] |
Contact | Monsanto
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Comment | Primer data obtained in 2009-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch17_Dt.03 | N/A | 79.5 | CGR5578a | View |
2 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 21 | CGR5578a | View |
3 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch21_Dt.11 | N/A | 6.8 | CGR5578b | View |
4 | Monsanto SSR Bin Map, (2009) | AD_ch21_Dt.11 | N/A | 21 | CGR5578b | View |
5 | Yumian-1 x T586, RIL (2015) | AD_ch21_Dt.11 | N/A | 4.1 | CGR5578 | View |
6 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 85.7 | CGR5578 | View |
7 | LMY22 x LY343, RIL (2016) | chr.21-1 | N/A | 61.8 | CGR5578 | View |
8 | LMY22 x LY343, RIL (2020) | D11 | N/A | 27.26 | CGR5578 | View |
9 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch11_At.11 | N/A | 48.5 | CGR5578c | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 107.8 | CGR5578 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 33.2 | cgr5578-150 | View |
Sequence
>CGR5578 ID=CGR5578; Name=CGR5578; organism=Gossypium hirsutum; type=genetic_marker; length=163bp ACCACCCGATACCCAAAGATTTTTCAACTTTTATTTATTTATTGATAAAA AAGACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAAATTTTAGAAGCAAAGAGTGAAAAAGAAAAAAAGTTTA CCAGTGGCGGCAC
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