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Marker Overview
| Name | BNL1434 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1434_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)13 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1434_F: AAATTCAAGAATCAAAAAACAACA |
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| Primer 2 | BNL1434_R: TTATGCCAAAGTATATGGAGTAACG |
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| Polymorphism | P_ BNL1434 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch02_At.02 | N/A | 88.1 | BNL1434 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch02_At.02 | N/A | 37.65 | BNL1434 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch02_At.02 | N/A | 15.27 | BNL1434 | View |
| 4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch02_At.02 | N/A | 10.76 | BNL1434 | View |
| 5 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch02_At.02 | N/A | 16.3 | BNL1434 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch09_At.09 | N/A | 9 | BNL1434 | View |
| 7 | TM-1 x 3-79, RIL (2006) | AD_ch02_At.02 | N/A | 0 | BNL1434 | View |
| 8 | TM-1 x 3-79, RIL (2012) | AD_ch02_At.02 | N/A | 95.17 | BNL1434 | View |
| 9 | Yumian-1 x T586, F2:3 (2005) | AD_ch02_At.02 | N/A | 21.7 | BNL1434 | View |
| 10 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 167 | BNL1434 | View |
| 11 | Yumian-1 x T586, RIL (2006) | AD_ch02_At.02 | N/A | 0 | BNL1434 | View |
| 12 | TM-1 x 3-79, RIL (2014) | AD_ch02_At.02 | N/A | 96.4 | BNL1434 | View |
| 13 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch02_At.02 | N/A | 49.3 | BNL1434 | View |
| 14 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch02_At.02 | N/A | 15.5 | BNL1434b | View |
| 15 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch09_At.09 | N/A | 16.7 | BNL1434b | View |
| 16 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch02_At.02 | N/A | 0 | BNL1434a | View |
| 17 | Monsanto SSR Bin Map, (2009) | AD_ch02_At.02 | N/A | 81 | BNL1434a | View |
| 18 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch02_At.02 | N/A | 0 | BNL1434-244 | View |
| 19 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch02_At.02 | N/A | 8.3 | BNL1434-245 | View |
| 20 | Yumian-1 x T586, RIL (2009) | AD_ch02_At.02 | N/A | 34.9 | BNL1434/250y(C2) | View |
| 21 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch02_At.02 | N/A | 21.7 | BNL1434(C2) | View |
| 22 | TM-1 x 3-79, RIL (2012.v3) | AD_ch02_At.02 | N/A | 96.43 | BNL1434 | View |
| 23 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch02_At.02 | N/A | 47.1 | BNL1434 | View |
Sequence
>BNL1434 ID=BNL1434; Name=BNL1434; organism=Gossypium hirsutum; type=genetic_marker; length=246bp
AAATTCAAGAATCAAAAAACAACAAAACAAATTCATAAAAAAATAAAAGG
GAGAGAGAGAGAGAGAGAGAGAGAGAGAAATTGTTGGTTTAAAAACATGG
GGTCTAATAAAGATGGAGTTTTTCTTTTTTTCAGTTTCAATGTTTTTTGA
AAGGTTTAGTAGTGGTAGAGAGTGGNGAGTGGNGACTTGATTTGCTTTTA
TTTCTTTTATTCAAAATATGCCGTTACTCCATATACTTTGGCATAA
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