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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | CAMD-E x Seaberry, F2 (1998) | AD_ch18_Dt.13 | N/A | 85.2 | A1552a | View |
| 2 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch13_At.13 | N/A | 0 | A1552a | View |
| 3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch13_At.13 | N/A | 0 | A1552a | View |
| 4 | Palmeri x K-101, F2 (2007) | AD_ch18_Dt.13 | N/A | 1.6 | A1552a | View |
| 5 | Pima S-7 x Empire, F2 (2007) | AD_ch18_Dt.13 | N/A | 0 | A1552a | View |
| 6 | Pima S-7 x n2, F2 (2007) | AD_ch13_At.13 | N/A | 0 | A1552a | View |
| 7 | Sic'on x F-177, F2 (2004) | AD_ch18_Dt.13 | N/A | 0 | A1552a | View |
| 8 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch18_Dt.13 | N/A | 0 | A1552a | View |
| 9 | CAMD-E x Seaberry, F2 (1998) | AD_ch13_At.13 | N/A | 0 | A1552b | View |
| 10 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch18_Dt.13 | N/A | 0 | A1552b | View |
| 11 | Pima S-7 x Empire, F2 (2007) | AD_ch18_Dt.13 | N/A | 2.1 | A1552b | View |
| 12 | Pima S-7 x n2, F2 (2007) | AD_ch21_Dt.11 | N/A | 182.1 | A1552b | View |
| 13 | Palmeri x K-101, F2 (2007) | AD_ch13_At.13 | N/A | 7.5 | A1552b | View |
| 14 | Gtr x Gra, F2 (2004) | D.13 | N/A | 0 | A1552 | View |
| 15 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch13_At.13 | N/A | 17.24 | A1552 | View |
| 16 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch18_Dt.13 | N/A | 0 | A1552 | View |
| 17 | Pima S-7 x im, F2 (2007) | AD_ch13_At.13 | N/A | 0 | A1552 | View |
| 18 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 2 | A1552 | View |
| 19 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 19 | A1552 | View |
| 20 | Sic'on x F-177, F2 (2004) | AD_ch13_At.13 | N/A | 0 | A1552 | View |
| 21 | TM-1 x WT-936, F2 (2005) | AD_ch13_At.13 | N/A | 0 | A1552 | View |
| 22 | TM-1 x WT-936, F2 (2005) | AD_ch18_Dt.13 | N/A | 0 | A1552 | View |
| 23 | TM-1 x WT-936, F2 (2005) | AD_ch17_Dt.03 | N/A | 57 | A1552 | View |
| 24 | TM-1 x WT-936, F2 (2005) | AD_ch13_At.13 | N/A | 1.1 | A1552 | View |
| 25 | TM-1 x WT-936, F2 (2005) | AD_ch18_Dt.13 | N/A | 2.6 | A1552 | View |
Sequence
>A1552 ID=A1552; Name=A1552; organism=Gossypium herbaceum; type=genetic_marker; length=955bp
CTTGAAACCTCTTTTTTCAGTATACTCAGTTTCGTATTCGATGTCCTTAT
CTCACTTTGAGCCATATCGAGCTGGCCCTGCAAACTTTGAATCTTTTCAA
ACGCCTGTTTATTCTCGAGTTTCAAACACGCGATTTCCGTTTCGGGATCC
CGAGGCATTTCTTTAGTCATATTGAACTCATCCTCCAAGGGCAGGATCTT
GCCATCATCATGCAGGATTTCTTTATCCACCTTGTTTTGAACCATTGATG
TGTCAGTTTTAACACTATCTTCTTCGGATGAATCCGATTCCGATGTTTCC
ATCTGTTTATATTTCTGTAGCTCAATTGTCAACCAATTGTTTTTTTCTTC
GGAAAGTCGTAGTTTTCTATTAACAATCTTCAATTCTTCCTCATACTTTC
TAATCCGAGCAAGCAGTTCCGATTCATCCTCAAGTATTTGTAGCTTCTCT
TTCATTTCGCGGAGCTCAATCTCCAATTCAATCGTCTTCCGACAAGCCCC
TTGATCGCCTAAATTCATCGTTGATGAAACCGTGTAATTATTAACCGATC
CATCATCAGACTCCGGTTCGGAATCTGTTACATAAGACGACTCGTCATCT
CCTTTCTGGTACATATCGCTCCAACTAGAACCAAGGAAGAATTCAAAACC
GGCAGCTCGTGTACCCGACCTCCTACGAGTCAACCTTTGTTCAGGAGAGG
GAAATGTAGGCGGCAATTCAAAGCCATTATCTGAGACACCTGAACCTTGA
GATTGAACGTCCAACAGAACATTCCTCCTCAATTCTCCTTTAAGATAATC
ATTACGCTCCACCAATGTTCGATATAAACGGTAGAACTCCTCAACATGAG
CCACAAGCTCCGGCCGTTTCTGATAATACATCTCGGCCTTTTTGGCAAAG
GAATCCGCATCTTGGTCAATCAGATTCAACATCTGTTTGACTCTTCGATC
CATTT
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