D1-4

Germplasm Overview


Name	D1-4
Alias	col.#3 [view all 5]
GRIN ID	PI 530768
Type	Wild Unimproved
Species	Gossypium thurberi
In Collection	[view all]
Description	N/A
Origin Country	United States
Origin Detail	United States, Mississippi
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 152]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
col.#3
D1 4
PI 530768
D01-04
D1-04

Phenotypic Data

Total 152 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	boll nectaries	absent	US_TX_CS_2012	803
2	NCGC germplasm evaluation, CS12	bract nectaries	present	US_TX_CS_2012	803
3	NCGC germplasm evaluation, CS12	bract teeth size	none	US_TX_CS_2012	803
4	NCGC germplasm evaluation, CS12	bract type	normal	US_TX_CS_2012	803
5	NCGC germplasm evaluation, CS12	canopy type	open	US_TX_CS_2012	803
6	NCGC germplasm evaluation, CS12	leaf color	green	US_TX_CS_2012	803
7	NCGC germplasm evaluation, CS12	leaf gossypol glands	light	US_TX_CS_2012	803
8	NCGC germplasm evaluation, CS12	leaf shape	okra	US_TX_CS_2012	803
9	NCGC germplasm evaluation, CS12	leaf size	medium	US_TX_CS_2012	803
10	NCGC germplasm evaluation, CS12	plant shape	pyramid	US_TX_CS_2012	803
11	NCGC germplasm evaluation, CS12	population homogeneity	uniform	US_TX_CS_2012	803
12	NCGC germplasm evaluation, CS12	stem gossypol glands	light	US_TX_CS_2012	803
13	NCGC germplasm evaluation, CS12	trichome density on leaf	none	US_TX_CS_2012	803
14	NCGC germplasm evaluation, CS12	trichome density on stem	none	US_TX_CS_2012	803
15	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	803
16	NCGC germplasm evaluation, CS12	plot plant stand	3 plants	US_TX_CS_2012	803
17	NCGC germplasm evaluation, CS14	boll color	green	US_TX_CS_2014	102
18	NCGC germplasm evaluation, CS14	boll color	green	US_TX_CS_2014	103
19	NCGC germplasm evaluation, CS14	boll color	green	US_TX_CS_2014	101
20	NCGC germplasm evaluation, CS14	boll color	green	US_TX_CS_2014	104
21	NCGC germplasm evaluation, CS14	boll gossypol glands	medium	US_TX_CS_2014	101
22	NCGC germplasm evaluation, CS14	boll gossypol glands	medium	US_TX_CS_2014	103
23	NCGC germplasm evaluation, CS14	boll gossypol glands	medium	US_TX_CS_2014	104
24	NCGC germplasm evaluation, CS14	boll gossypol glands	medium	US_TX_CS_2014	102
25	NCGC germplasm evaluation, CS14	boll nectaries	absent	US_TX_CS_2014	101

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0016	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0020	A/C	C
3	TAMU_SNP63K_genotype	USDA_SNP0022	T/C	T
4	TAMU_SNP63K_genotype	USDA_SNP0026	G/T	-
5	TAMU_SNP63K_genotype	USDA_SNP0027	A/G	A
6	TAMU_SNP63K_genotype	USDA_SNP0039	C/T	T
7	TAMU_SNP63K_genotype	USDA_SNP0049	A/C	A
8	TAMU_SNP63K_genotype	USDA_SNP0057	C/T	-
9	TAMU_SNP63K_genotype	USDA_SNP0064	A/G	-
10	TAMU_SNP63K_genotype	USDA_SNP0070	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0073	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0074	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0075	A/G	G
14	TAMU_SNP63K_genotype	USDA_SNP0076	A/C	C
15	TAMU_SNP63K_genotype	USDA_SNP0077	A/G	A
16	TAMU_SNP63K_genotype	USDA_SNP0084	A/C	-
17	TAMU_SNP63K_genotype	USDA_SNP0085	C/T	-
18	TAMU_SNP63K_genotype	USDA_SNP0092	C/T	T
19	TAMU_SNP63K_genotype	USDA_SNP0102	C/T	C
20	TAMU_SNP63K_genotype	USDA_SNP0107	A/C	-
21	TAMU_SNP63K_genotype	USDA_SNP0109	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0111	G/T	T
23	TAMU_SNP63K_genotype	USDA_SNP0121	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0134	A/C	C
25	TAMU_SNP63K_genotype	USDA_SNP0136	G/T	T

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Cross References

External references for this accession


Database	Accession
COLL_wild	D1-4
GRIN	PI 530768

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530768	GRIN:
NCGC Cotton Wild Species Collection (USA)	D1-4

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