Gstu01G009300.1

Transcript Overview
NameGstu01G009300.1
Unique NameGstu01G009300.1_C1_HAU_v1
TypemRNA
OrganismGossypium sturtianum (Cotton (G. sturtianum))
Sequence length2577
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01chromosomeChr01:34266982..34269846 +Gossypium sturtianum (C1) genome HAU_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
awc1hL0413Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awc1hL0675Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awc1hL0677Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awc1hL0765Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awc1hL0873Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awc1hL0974Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
c1hc1hR028Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hc1hR052Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hc1hR076Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hd3dR0018Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
c1hd3dR0047Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
c1hd3dR0068Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
c1hd3dR0095Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
c1hd3kR0013Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
c1hd3kR0037Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
c1hd3kR0045Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
c1hd8iR0024Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
c1hd8iR0036Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
c1hd3kR0064Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
c1hd8iR0054Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
c1hd3kR0081Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
c1hd8iR0074Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
c1hd9iR0024Gossypium laxum (D9) genome ISU_v1Gossypium laxum
c1hdfiR0006Gossypium aridum (D4) genome ISU_v1Gossypium aridum
c1hdfiR0037Gossypium aridum (D4) genome ISU_v1Gossypium aridum
c1hd9iR0041Gossypium laxum (D9) genome ISU_v1Gossypium laxum
c1hd9iR0059Gossypium laxum (D9) genome ISU_v1Gossypium laxum
c1hd9iR0079Gossypium laxum (D9) genome ISU_v1Gossypium laxum
c1hdfiR0069Gossypium aridum (D4) genome ISU_v1Gossypium aridum
c1hdooR0031Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
c1hdooR0051Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
c1hdooR0068Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
c1hdooR0089Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
c1hdsiR0007Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
c1hdsiR0023Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
c1hdsiR0071Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
c1hdttR0007Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
c1hdttR0022Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
c1hdttR0036Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
c1hgauR0010Gossypium australe (G2) genome CRI_v1.1Gossypium australe
c1hgauR0060Gossypium australe (G2) genome CRI_v1.1Gossypium australe
c1hgauR0067Gossypium australe (G2) genome CRI_v1.1Gossypium australe
c1hgbiR0000Gossypium bickii (G1) genome JZU_v1Gossypium bickii
c1hgbiR0045Gossypium bickii (G1) genome JZU_v1Gossypium bickii
c1hgbiR0082Gossypium bickii (G1) genome JZU_v1Gossypium bickii
c1hgbiR0097Gossypium bickii (G1) genome JZU_v1Gossypium bickii
c1hgbiR0109Gossypium bickii (G1) genome JZU_v1Gossypium bickii
c1hgkR0011Gossypioides kirkii genome ISU_v3Gossypioides kirkii
c1hgkR0019Gossypioides kirkii genome ISU_v3Gossypioides kirkii
c1hgkR0035Gossypioides kirkii genome ISU_v3Gossypioides kirkii
c1hgkR0046Gossypioides kirkii genome ISU_v3Gossypioides kirkii
c1hgosR0001Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
c1hgosR0034Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
c1hgrbR0011Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
c1hgosR0064Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
c1hgosR0074Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
c1hgosR0091Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
c1hgrbR0030Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
c1hgrbR0047Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
c1hgrbR0066Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
c1hgrhR0010Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
c1hgrhR0034Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
c1hgrhR0063Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
c1hgrhR0076Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
c1hgroR0003Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
c1hgroR0053Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
c1hgroR0075Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
c1hgroR0090Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
c1hgtiR0018Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
c1hgtiR0043Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
c1hgtbR0000Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
c1hgtiR0066Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
c1hgtiR0093Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
c1hgtbR0033Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
c1hgtbR0051Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
c1hgtbR0068Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
c1hgtbR0083Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
c1hhwR0021Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
c1hhwR0038Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
c1hhwR0055Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
c1hhwR0073Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
c1hhnR0016Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
c1hhnR0023Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
c1hhnR0043Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
c1hhnR0059Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
c1hhnR0102Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
c1hhnR0124Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Gstu03G000010Gstu03G000010_C1_HAU_v1Gossypium sturtianumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gstu01G009300.1_C1_HAU_v1-exonGstu01G009300.1_C1_HAU_v1-exon-Chr01_C1_HAU_v1:34266982..34267443Gossypium sturtianumexon
Gstu01G009300.1_C1_HAU_v1-exonGstu01G009300.1_C1_HAU_v1-exon-Chr01_C1_HAU_v1:34267516..34268234Gossypium sturtianumexon
Gstu01G009300.1_C1_HAU_v1-exonGstu01G009300.1_C1_HAU_v1-exon-Chr01_C1_HAU_v1:34268268..34269193Gossypium sturtianumexon
Gstu01G009300.1_C1_HAU_v1-exonGstu01G009300.1_C1_HAU_v1-exon-Chr01_C1_HAU_v1:34269377..34269846Gossypium sturtianumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gstu01G009300.1_C1_HAU_v1-cdsGstu01G009300.1_C1_HAU_v1-cds-Chr01_C1_HAU_v1:34266982..34267443Gossypium sturtianumCDS
Gstu01G009300.1_C1_HAU_v1-cdsGstu01G009300.1_C1_HAU_v1-cds-Chr01_C1_HAU_v1:34267516..34268234Gossypium sturtianumCDS
Gstu01G009300.1_C1_HAU_v1-cdsGstu01G009300.1_C1_HAU_v1-cds-Chr01_C1_HAU_v1:34268268..34269193Gossypium sturtianumCDS
Gstu01G009300.1_C1_HAU_v1-cdsGstu01G009300.1_C1_HAU_v1-cds-Chr01_C1_HAU_v1:34269377..34269846Gossypium sturtianumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Gstu01G009300.1_C1_HAU_v1Gstu01G009300.1_C1_HAU_v1Gossypium sturtianumpolypeptide
Gstu01G009300.1_C1_HAU_v1Gstu01G009300.1_C1_HAU_v1-proteinGossypium sturtianumpolypeptide


Homology
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8IHN8_GOSHI (Uncharacterized protein LOC107894651 OS=Gossypium hirsutum OX=3635 GN=LOC107894651 PE=4 SV=1)

HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 561/893 (62.82%), Postives = 650/893 (72.79%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKT-----------PGLIVSDSVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRAVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            MN    SG NLGDNPTNP+IPDLD+AE+E    E  KQ E+ CRWLEEK +A+E+ D H G+D K LSLV+DL+LPHKFKM EFEKYNGT+C EAHITMFC+ MTGYVNNDQLLIH F+DSLVG A++WYNQLS ARINSWRDLAQAFM+QYNH                        YAQRWREVA+QV+PPLLEKE TMLFINTLKAPFITHMI S  KSFADI+M GEMIEN IR G+IE GE  KRSAP++K+NEVNNTS +N   SKAI V QPKV T GQQGS RQES T+   E++QFTPIP+TYRELYQSL+D H ++PF+LKPLQP Y KWYD+NA+C+YH GI GHSIENCT FKK VERLIKM +VKFD+TP+ EN LPNH D+GV  IG++  RR+KE++AEV+             G+I S      E + +YCEFH  EG E Q C EFR LVQ  +DNKEL+ +E  S    I   E E   +  + PRIII+ P N E       KVII KP  F YKD K VPW+ DC+VT+P  E +AS SK+ Q EGS TRSG+ Y +  VR EP K+K + VE+EK  E  INEPVKE+EAKEFLKFLKHSEYS+V++L KQSARISVLALLLSSE HREALM               KLDRLV+NISADNFIYFNDDEIPPG  GSTKAL ITTRCKG  + S                        AVPSSLHQKLKLVT+GRL+TINA+EDIIA VT+  PY ETNEE+IECSF SLEFVNATFILEG+E+ VPRI+R  RM LQ+M GKGALPG+GLG++LQGG Q+P L EKKD F LGF+PD +QR+K++EK+ ERRRARL G EV WE M F  IS
Sbjct:   62 MNNPTSSGFNLGDNPTNPLIPDLDVAEKEDLRAEAAKQLEEHCRWLEEKFKALESADGHHGVDGKGLSLVLDLVLPHKFKMPEFEKYNGTTCLEAHITMFCKRMTGYVNNDQLLIHFFRDSLVGVAARWYNQLSQARINSWRDLAQAFMQQYNHVTDITPDRITLQNMEKNPNENFRKYAQRWREVAMQVQPPLLEKEITMLFINTLKAPFITHMIRSTTKSFADIIMAGEMIENVIRGGKIE-GEAAKRSAPKRKDNEVNNTSRFN---SKAIIVGQPKVATVGQQGSQRQESCTRH--ERMQFTPIPVTYRELYQSLYDAHAIAPFFLKPLQPPYLKWYDANARCEYHAGISGHSIENCTGFKKAVERLIKMRVVKFDNTPNTENPLPNHDDQGVKTIGEASERRMKENVAEVRMLMKVIWEEMMKRGMITSRRER--EKMGNYCEFHGKEGDETQNCEEFRALVQGFIDNKELQIFEGSSYKREISVLEDE--QKGTSRPRIIISLPGNNEVETPAVLKVIIHKPTLFLYKDSKRVPWSCDCSVTMPEKENIASTSKDVQVEGSQTRSGKRYDTGGVRVEPTKTKGVKVEKEKETEVPINEPVKEKEAKEFLKFLKHSEYSMVKQLRKQSARISVLALLLSSEAHREALM---------------KLDRLVNNISADNFIYFNDDEIPPGSRGSTKALHITTRCKGPWIHSA----------------------GAVPSSLHQKLKLVTDGRLITINAEEDIIAAVTSKTPYAETNEESIECSFRSLEFVNATFILEGSELPVPRIARAMRMALQIMAGKGALPGRGLGKYLQGGTQIPKLIEKKDHFGLGFKPDYKQRRKDIEKRQERRRARLDGREVGWESMTFSLIS 907          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A5B6UPT1_9ROSI (Gag/pol polyprotein OS=Gossypium australe OX=47621 GN=EPI10_013065 PE=4 SV=1)

HSP 1 Score: 1076.62 bits (2783), Expect = 0.000e+0
Identity = 530/795 (66.67%), Postives = 609/795 (76.60%), Query Frame = 0
Query:   99 MFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIV----------SDSVEG-CEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRAVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            MFCR M GY  NDQLLIHCFQDSL  + +KWYNQL+ A++NSW DLAQAF KQY H                        YAQRWREVA QV+PPL EKET  LFI+TL+APFITHM+GS  +SF DIV+ GEMIENAIR GRIEAGE T+RS PRKK+NEVNN STY+KGY KA+TV+ PKV+   QQG+  QE G + N E+ QFTPI +TY E+Y+ LFD H V+P+YLKPLQP +PKWY+ NA+C+YH GI GHSIENCTAFKKVVE+ IKMGI++ DD P   N LPNHGD  VN IGK   R+ KEDI++V+TP +IV            S+EG  E   +YC FH AEGH+IQ+C EFR+LVQ  MDNKELEFYEE S  G I ATEGELT QK   P+III+RP+N    AQ  PK+II+KP SFPY++ K VPW+Y+CNV  PG     S   E Q EG  TRSG+ Y    VR    KSK + VE E+ P   IN PV+EEEAKEFLKFLKHSEYSVVE+L KQ ARISVLALLLSSEVHR+ALMKVLNETYVTKDIS++KLDRL+ NISADNFI F+DDEIP GGMGSTKAL ITT CKG  LPSVLIDNGSALNVLPLSTL RLPIDRAVPSSLHQKLKLV +GRLVTINA+EDIIATVTNDAPY+E NEEA+ECSF SLEFVNATF+ EG ++ VP+IS+TTRMGLQMM+ KGALPG+GLGR LQG +QVP  K K+DRF LGF+P+  + ++EMEKK ERRRARL GEE  WE M FPHIS
Sbjct:    1 MFCRRMAGYAENDQLLIHCFQDSLARSVAKWYNQLTRAQVNSWEDLAQAFTKQYGHVTDIALDRITLQNIEKKPNEDFRQYAQRWREVATQVQPPLSEKETVKLFISTLRAPFITHMVGSTTQSFTDIVLAGEMIENAIRGGRIEAGEATRRSVPRKKDNEVNNMSTYSKGYPKAVTVNSPKVMAVKQQGTTGQEPGPRPNFERPQFTPISITYGEMYRRLFDAHIVAPYYLKPLQPPFPKWYNPNAECEYHAGITGHSIENCTAFKKVVEKFIKMGIIELDDLPGSGNPLPNHGDGAVNMIGKDRARKTKEDISDVRTPLIIVWGEMVKRGLIKSSLEGRSEKPGNYCAFHGAEGHKIQDCTEFRLLVQGFMDNKELEFYEENSEEGDIHATEGELTRQKAKLPKIIISRPSNSGSKAQAIPKIIIKKPASFPYEEDKKVPWSYNCNVATPGVGGSTSTENENQKEGFHTRSGKRYDPTGVRINLAKSKAMTVEPEEEPSTLINVPVREEEAKEFLKFLKHSEYSVVEQLHKQPARISVLALLLSSEVHRKALMKVLNETYVTKDISVSKLDRLIGNISADNFISFSDDEIPSGGMGSTKALHITTHCKGSILPSVLIDNGSALNVLPLSTLKRLPIDRAVPSSLHQKLKLVADGRLVTINAEEDIIATVTNDAPYVEANEEAVECSFRSLEFVNATFVREGAKIPVPKISKTTRMGLQMMISKGALPGRGLGRCLQGEVQVPSPKGKRDRFGLGFKPNTNEMRREMEKKQERRRARLKGEETMWEPMTFPHIS 795          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8M3D9_GOSHI (Uncharacterized protein LOC107932618 OS=Gossypium hirsutum OX=3635 GN=LOC107932618 PE=4 SV=1)

HSP 1 Score: 1014.22 bits (2621), Expect = 0.000e+0
Identity = 518/791 (65.49%), Postives = 591/791 (74.72%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNHYAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSD---------SVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRAVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGL 782
            MNFQ GSG N GDNPTNPVIPDLD+AE+E   ++  +Q E+RCRWLE+K + +EN D   GIDAKDLSLV DL+LPHKFKMLEFEKYNGT+CPEA+ITMFCR MT Y                                                  RWREVA+QV+ PLLEKETTMLFINTLKAPFITHMIGS  KSFADIVM GEMIENAI+SG+IE G+  KR AP++K+NEVNNT++YN   SKAITVSQP+  T GQQ S +Q SG++QN EK+ FTPI +TYRELYQSLF+ H+++PF+LKPLQP YPKWYD+NA+C+Y+ GI GH I+N T+FKK VERLIKMG+VKFDDTPS EN LPNHGD+GVNAIG   +RRIKED+AEV+TP  +V +         S EG  GV+DYCEFH  EGHEIQE  EF+ LVQSLMDNKELEFYE GS  G IC  EG   NQ ++ PRIII+ P N E   QIAPKVII KPVSFPYKD K VPWNY+CNVT+P  E +AS SK+ +++GS TR+G+ Y    VR EP K+K  A ++EK  E  +NEPVKEEEAKEFLKFLKHSEYSVVE+L KQ ARISVLALLL SEVHREALMKV NET V  DIS+NKLDRLVSNI+ADNFIYFNDDEIPPGGMGS KAL ITTRCKGY LP                        RAVPSSLHQKLKLV +GRLVTINA+EDIIATVT+DAPY+E NEEAI+CSF SLEFVN TFI EGNEV VPRIS+TTRMGL
Sbjct:    1 MNFQTGSGFNSGDNPTNPVIPDLDVAEKEEMRLKSSRQLEERCRWLEKKFKTLENADNRQGIDAKDLSLVPDLVLPHKFKMLEFEKYNGTTCPEAYITMFCRRMTDY--------------------------------------------------RWREVAMQVQLPLLEKETTMLFINTLKAPFITHMIGSTTKSFADIVMAGEMIENAIKSGKIE-GKTAKRLAPKRKDNEVNNTNSYN---SKAITVSQPRATTVGQQDSQKQGSGSRQNFEKVSFTPILVTYRELYQSLFNAHEIAPFHLKPLQPPYPKWYDANAKCEYYAGISGHLIKNYTSFKKAVERLIKMGVVKFDDTPSTENPLPNHGDQGVNAIGDIGMRRIKEDVAEVRTPMKLVWEEMVKREMIISKEGNRGVKDYCEFHVEEGHEIQEYDEFKALVQSLMDNKELEFYEAGSDEGHICTLEGGPKNQGISRPRIIISLPRNNEVETQIAPKVIIHKPVSFPYKDNKRVPWNYNCNVTMPEKEDIASASKKVRDQGSYTRNGKRYDVEGVRVEPAKAK--AFDKEKRAEVLVNEPVKEEEAKEFLKFLKHSEYSVVEQLRKQPARISVLALLLRSEVHREALMKVFNETCVINDISVNKLDRLVSNINADNFIYFNDDEIPPGGMGSAKALHITTRCKGYILP------------------------RAVPSSLHQKLKLVADGRLVTINAEEDIIATVTSDAPYVEANEEAIKCSFRSLEFVNTTFISEGNEVPVPRISKTTRMGL 711          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8LF56_GOSHI (Uncharacterized protein LOC107925794 OS=Gossypium hirsutum OX=3635 GN=LOC107925794 PE=4 SV=1)

HSP 1 Score: 990.719 bits (2560), Expect = 0.000e+0
Identity = 511/901 (56.71%), Postives = 633/901 (70.26%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLD-MAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTP-----------GLIVSDSVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPE----AFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSA--------LNVLPLST--------------------LNRLPIDR---------------------------------AVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHL 800
            MNFQVGSGS+  +NP N ++PD D + E+E    ELPKQ E+R +W+EEKL+AME T+   GIDAKDLSLV DL+LP+KFKM +FEKYNGT+CP AHITMFCR MTGYVNNDQLLIHCFQDSL+G ASKWYNQLS A+I+SWRDLAQAFMKQY H                        YAQRWREVA+QV+PPLLE+E TMLF+NTLKAPFITHM+GSA K+FADIVM GEMIE+ ++SG+I+  EN +R   +KKE+EVNN +TYNK    +ITV+QP+ +  GQQGS +QESG + N+E+ QFTPIPM+Y+ELYQ+LF+ H V+PFYL PLQP YPKWYD+NAQCDYH G+ GHSIE+CTAFK +VE+LI+MG+VK DD+   EN LP H D GVN + +S  +++K++IAEV+ P           GLI SD VEG + + +YCEFH   GHEIQ C +FR L+QS+MD  E+EF+EE  R   ICA+E E        P++II+ P   E  AQ+APK++IQKP  F YK+ K V WNY+C V + G E      KE Q  GS T +  + G +N  TE V+ K  A +++K  +      INEP+KE EA EFLKFLKHSEYS+VE+L KQ  RISVL+LL+SSE+HR ALMK LNE YV  DIS+N+L RLV+NISADNFI+FNDDEIP GGMGSTKAL I+  CKG  +  VLIDNGSA        LN LP+ +                    L R+ I                                   AVPS+LHQK+KLVTEGRLVTINA+E IIA+VT++APY+ET+E+A+E SF SLEF+N TFI+EG+ + VP+ISRTT MGLQ+MVG+GA+P KGLGR+L
Sbjct:  114 MNFQVGSGSSPENNPANTIVPDFDEVVEKEKTKDELPKQLEERWKWIEEKLKAMETTEICHGIDAKDLSLVPDLVLPYKFKMPDFEKYNGTTCPAAHITMFCRRMTGYVNNDQLLIHCFQDSLMGVASKWYNQLSRAKISSWRDLAQAFMKQYGHVAEMVPDRITLQNIKKKSNEGFRQYAQRWREVAVQVQPPLLEREMTMLFVNTLKAPFITHMLGSATKNFADIVMSGEMIESVVKSGKIDVRENNRRQNLKKKESEVNNVNTYNK----SITVNQPRKVVAGQQGSSKQESGARPNTERPQFTPIPMSYKELYQNLFNAHVVAPFYLTPLQPPYPKWYDANAQCDYHAGVTGHSIEHCTAFKNLVEKLIQMGVVKIDDSSGMENPLPKHTDAGVNMVDESTGKKVKKNIAEVRIPLRRVWKEMLRRGLIASDMVEG-DKIENYCEFHHEVGHEIQGCEKFRALIQSMMDIGEMEFFEEEERKENICASESE-----TRIPKVIISCPKVTEVRAQMAPKIVIQKPTKFSYKNSKKVSWNYECRVMVSGKEASIRVEKENQKIGSYTNTEEYCGRINAETESVEGKVFAAKQKKEKKIELRPLINEPIKEAEATEFLKFLKHSEYSMVEQLHKQPTRISVLSLLMSSELHRNALMKALNEAYVASDISVNQLGRLVNNISADNFIFFNDDEIPSGGMGSTKALHISAWCKGSLVSGVLIDNGSALNVLPLSTLNRLPVDSSHMKTCQNVVRAFDGTERKVLGRIEIPLLIGPNTYEVDFIVMDIKPSYNCLLGRPWIHSAGAVPSTLHQKIKLVTEGRLVTINAEESIIASVTSNAPYVETDEDAVEYSFRSLEFINTTFIVEGSRIPVPKISRTTIMGLQLMVGRGAVPEKGLGRNL 1004          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8IDT0_GOSHI (Uncharacterized protein LOC107895482 OS=Gossypium hirsutum OX=3635 GN=LOC107895482 PE=4 SV=1)

HSP 1 Score: 973 bits (2514), Expect = 0.000e+0
Identity = 531/917 (57.91%), Postives = 628/917 (68.48%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLE-FEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSDSVEGCEGV---------RDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRAVPSSLHQKLK-------------------------LVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            MNFQ  SG N GDN  N VIPDLD+AERE   +EL +Q       LEE  R +E                       KF+ LE  +   G    +  + +                    DSLVG A++WYNQLS ARI+SWRDLAQAFM+QYNH                        YAQRWRE+A+QV+PPLLEKETTMLFINTLK PFIT MIGS  K+FADIVM GE+IENAIR G+IE GE TKRS  R+K+N+VNNTS+YN   S  +TVSQP+V T GQ+ S +Q S ++QNSEK+    I +TY ELYQSLF+ H ++PF+LKPLQP YPKWYD NA+C+YH GI GHSIENCT FKK VE+LIKMG+VKFDDT S EN LPNHGD+GVNA+  + +RRIK+ +++V+T   ++ + +   E +         RDYCEF+  EGHE      F+ LVQSLMDNKELEFYE GS  G IC  EG   NQ  N PRIII+   + E          ++ P      D K VPWNY+C+V++P  E +AS SKE Q EGS TRSG+ Y    V+ EP K+K  A+++ KG E  +NE VKEEEA+EFLKFLKHSEYSVVE+L KQ ARISVLALLL SE H++ALMKVLNETYVT +IS+NKLDR VSNISADNFIYFNDDEIPPGGMG  KAL ITTRCKGYT+PSVLIDNGSALNV+ LSTLNRLPID +   + H  ++                         LV +GRLVTIN +EDIIA VT+ APY+E NEEAIECS  SLEFVNATFI EGNEVSVP+ISRTTRMGLQM +G+GALPGKGLGR+LQGGIQVP LKEKKD F LGFRPD +Q ++EMEK  E+RRARLS +EV+WE M FPHIS
Sbjct:   78 MNFQTSSGFNPGDNLANMVIPDLDVAEREEMRLELSRQ-------LEEHCRWLE----------------------EKFRALENADNRQGMDAKDLSLVLD------------------LDSLVGVAARWYNQLSRARIDSWRDLAQAFMQQYNHVTDMIPDRITLQNMEKKPNESFRLYAQRWREIAMQVQPPLLEKETTMLFINTLKTPFITRMIGSTTKNFADIVMAGEIIENAIRGGKIE-GEATKRSVSRRKDNKVNNTSSYN---SNTVTVSQPRVTTVGQEDSQKQGSVSRQNSEKVS-NQISVTYLELYQSLFNAHAIAPFHLKPLQPPYPKWYDPNAKCEYHAGISGHSIENCTCFKKAVEKLIKMGVVKFDDTLSTENPLPNHGDQGVNAVEDTGMRRIKDGVSKVRTLMKMIWEEMVKREMIISKDRNKRARDYCEFYAEEGHE------FKALVQSLMDNKELEFYEAGSNEGHICTLEGTPKNQ--NRPRIIISLLGSNE----------VETPT-----DNKRVPWNYNCHVSMPEKEDIASASKEAQGEGSYTRSGKRYDVEGVKVEPAKAK--ALDKRKGTETLVNELVKEEEAREFLKFLKHSEYSVVEQLRKQPARISVLALLLCSEAHQKALMKVLNETYVTNNISVNKLDRFVSNISADNFIYFNDDEIPPGGMGLAKALHITTRCKGYTVPSVLIDNGSALNVMSLSTLNRLPIDSSHMKACHNVVQAFDGTERRVMGKIDIPLMIGPNTYELVADGRLVTINVEEDIIAIVTSSAPYVEANEEAIECSLHSLEFVNATFIAEGNEVSVPKISRTTRMGLQMTMGRGALPGKGLGRYLQGGIQVPELKEKKDHFGLGFRPDQKQMRREMEKHQEKRRARLSEKEVQWESMTFPHIS 917          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A5B6W1X5_9ROSI (Retrotransposon gag domain-containing protein OS=Gossypium australe OX=47621 GN=EPI10_025425 PE=4 SV=1)

HSP 1 Score: 959.518 bits (2479), Expect = 0.000e+0
Identity = 505/911 (55.43%), Postives = 617/911 (67.73%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLD-MAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSDSVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQ--KVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKG-PEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPID-----------RAVPSSLHQKL--------------KLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            +N   GS SN GDN    ++PDLD  AE E   +ELPK+FEDRC+WLEEK +A+++ D    +DAK LSLV +L+LP KFKM EFEKYN TSCPEAHITMFC  MTGYVNNDQLLIHCFQDSL GAA+K YNQLSC +I SW+DLAQAFMK Y+H                        YAQRWREVA QV+PPLLEKE TMLFINTLKAPFI HM+G A KSFADI                       R+ P+K+ENEV+N S+   GY K I V+QP+ +T GQQ   +QE  T+Q +EK QFTPI +TYRELY++LFD H V+PFYLKPLQP YPKWYD+NAQC+YH  + GHSIENCT+FK++V+RLIK G+V F+D P G NLLP+H D GVNAI ++I  R K++IAEV+TP  +V                        +E  + R+++Q          Y+       +C+TE     +   VN+P +IITRP   E GA+ APK+IIQKPV+F YKD K VPW Y+C VTI G E   S                     N++  P K K   + + +G  E  +N+ V E EA+EFLKFLKHSEYSVVE+L +Q  RISV+ LLL+S+VHR AL+ VLNETYV KDI +NKLDRL SNISADNFI F+DDEIPPGGMGSTKAL IT RCKGYTLPSVLIDNGSALNVLPLSTLNRLPID           RA   +  + +              +LVTEGRL+TINAKEDIIA+VT++ PY+E + EAIECSF SLEFVNA  I EG+++ VP+ISR TRMGLQ+ +GKGALPG+ LG++LQG +++P L +K DRF L  R DA+QRK+E+E+K ERRRARL+G E++W  + FPHIS
Sbjct:   47 VNLPTGSSSNPGDNLAKSMVPDLDNAAEEEKTRVELPKEFEDRCKWLEEKFKALKSADYQCDVDAKKLSLVPNLVLPPKFKMPEFEKYNRTSCPEAHITMFCLRMTGYVNNDQLLIHCFQDSLTGAAAKCYNQLSCTQIKSWKDLAQAFMKNYSHVTDIAPDRITLQNMEKKSGESFRKYAQRWREVATQVQPPLLEKEMTMLFINTLKAPFINHMLGRATKSFADI-----------------------RTTPKKRENEVSNVSS---GYPKPIIVNQPRAVTVGQQAPSKQEPSTRQKTEKFQFTPILVTYRELYKTLFDAHIVAPFYLKPLQPPYPKWYDTNAQCEYHADVVGHSIENCTSFKRLVKRLIKEGVVDFNDAPGGGNLLPSHTDNGVNAIVENIGMRFKQEIAEVRTPLRVV-----------------------WKEMQKMRLVLQE---------YD-------VCSTERGSVERVLGVNHPVVIITRPRANETGARTAPKIIIQKPVTFSYKDNKRVPWGYNCAVTISGKENSVSVP-------------------NMKVGPEKEKYPLIGQGEGKSEPLVNKLVTESEAREFLKFLKHSEYSVVEQLQQQPVRISVMILLLNSDVHRRALLNVLNETYVAKDILVNKLDRLNSNISADNFISFSDDEIPPGGMGSTKALHITIRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDSSHMKTCQNIVRAFDGTERKVMGRIDIPLLIGPNTYELVTEGRLITINAKEDIIASVTSNTPYIENDTEAIECSFRSLEFVNAAIISEGSKIPVPKISRATRMGLQLTIGKGALPGRRLGKYLQGPVRMPGLVDKHDRFGLWHRSDAQQRKEELERKCERRRARLNGAEIEWGSITFPHIS 873          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A8J5Z9E5_9ROSI (G-patch domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_000409 PE=4 SV=1)

HSP 1 Score: 957.977 bits (2475), Expect = 0.000e+0
Identity = 483/747 (64.66%), Postives = 561/747 (75.10%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLD-MAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPS---GENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTP-----------GLIVSDSVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREK----GPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRA 704
            +N+Q+GSGSN GDNP NP+IPDLD MAE E     L ++ E+RC+WLEE+ +AME+ D H G+DAKDLSLV DL+LP KFKM EFEKYNG SCPEAHITMFCR MTGYVNNDQLLIHCFQDSLVGAASKWYNQLS  +INSW+DLAQAFMKQY+H                        YAQRWRE+A QV+PPLLEKETTMLFINTLKAPFI HM+GSA KSF+DIVM GEMIENAIR  +IEAGEN K+SAPR+KENEVNNTS+Y    SK +TV+QP+  T   QGS RQ+S  + N E+LQFTPIPM+YRELYQSLFD H VSPFYLKPLQP +PKWYD++AQC+YH G+ GHSIENCTAFKK+VE+LI+MG++KFDD+P      N LP+H  KGVNAI +   +RIK D+AEV+TP           GL+   S E    VR YCEFHK E H+IQEC EF+ +VQ+LMDNKE+EFY+E  R       EGE+                + EG  +       ++PV+F YKD K VPWNYDCNVTI G E  A  S+E Q+EG  TRSGR Y + N + EP K K++  E+ K     PE+ INEPV E+EAKEFLKFLKHSEYSVVE+L KQ ARISVLALL+SSE HR AL+KVLNETYV  DIS+NKLD LV+NISADNFI+FNDDEIP GGMGSTKAL ITTRCKG+TLP VLIDNGSALNVLPLSTLNRLP+D +
Sbjct:  857 INYQIGSGSNPGDNPVNPIIPDLDNMAENERVRTSLSRELEERCKWLEERFKAMESADYHCGVDAKDLSLVPDLVLPPKFKMPEFEKYNGMSCPEAHITMFCRRMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSRTKINSWKDLAQAFMKQYSHVMDMAPDRITLQNMEKKQSESFRQYAQRWREMATQVQPPLLEKETTMLFINTLKAPFINHMLGSATKSFSDIVMSGEMIENAIRCRKIEAGENAKKSAPRRKENEVNNTSSY----SKPVTVNQPRAATTSHQGSTRQDSNPRPNKERLQFTPIPMSYRELYQSLFDAHVVSPFYLKPLQPPFPKWYDTSAQCEYHAGVTGHSIENCTAFKKLVEKLIEMGVIKFDDSPGPNVAGNPLPDH--KGVNAIIEYGNKRIKADVAEVQTPLSRVWEQMVDRGLVAQHSKEKPREVRRYCEFHKDESHDIQECGEFKSMVQNLMDNKEIEFYDEIGR-----TEEGEVY--------------ASEEGRTE-------RRPVAFSYKDSKSVPWNYDCNVTIRGKENPAGTSEEGQDEGFYTRSGRRY-TPNTKAEPAKGKSIVAEQGKEETSKPESPINEPVTEKEAKEFLKFLKHSEYSVVEQLYKQPARISVLALLMSSETHRNALLKVLNETYVANDISVNKLDHLVNNISADNFIFFNDDEIPSGGMGSTKALHITTRCKGFTLPGVLIDNGSALNVLPLSTLNRLPVDNS 1570          

HSP 2 Score: 200.675 bits (509), Expect = 5.967e-49
Identity = 91/121 (75.21%), Postives = 109/121 (90.08%), Query Frame = 0
Query:  704 AVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDA 824
            AVPSSLHQKLK +TEGRLVT+NA+EDIIA+VT++APY+ T+EEAIECSF SLEFVNATF++EGN+V  PRIS+TTRMGLQ+ +GKGALPGKGLGR LQG +  PML +K+DRF LGF+PDA
Sbjct: 1631 AVPSSLHQKLKFITEGRLVTVNAEEDIIASVTSNAPYVGTDEEAIECSFRSLEFVNATFVVEGNKVPTPRISKTTRMGLQLTIGKGALPGKGLGRSLQGRVDAPMLMDKRDRFGLGFKPDA 1751          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A5B6X7M1_9ROSI (Gag/pol polyprotein OS=Gossypium australe OX=47621 GN=EPI10_032869 PE=4 SV=1)

HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 475/738 (64.36%), Postives = 549/738 (74.39%), Query Frame = 0
Query:    2 NFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNH------------------------YAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIV----------SDSVEG-CEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLPIDRA 704
            NFQ GSGSNLGDNP N V+PD DM E   A  E  +Q EDRC+ LEE+++A++N     G+  K+LSLV  LILP KFK  EFEKYNGTSCPEAHITMFCR M GY  NDQLLIHCFQDSLVG+ +KWYNQL+ A++NSW DLAQAF KQY H                        YAQRWREVA QV+PPL EKET  LFI+TL+APFITHM+GS  +SF DIV+ GEMIENAIR  RIEAGE T+R  PRKK+NEVNN STY+KGY KA+TV+ PKV+   QQG+  QE G + N E+ QFTPIP+TY E+YQ LF+ H V+P+YLKPLQP +PKWY+ NA+C+YH GI GHSIENCTAFKKVVE+ IKMGI++ DD P   N LPNHGD  VN I K   R+ KEDI++V+TP +IV            S+EG  E   +YC FH AEGH+IQ+C EFR+LVQ  MDNKELEFYEE S  G I ATEGELT QK   P+III+RP+N+   AQ  PK+II+KP SFPY++ K VPW+Y+CNV +PG     S   E Q EG  TRSGR Y    VR    KSK + VE E+ P   IN PV+EEEAKEFLKFLKHSEYSVVE+L KQ ARISVLALLLSSEVHR+ALMKVLNETYVTKDIS++KLDRL+ NISADNFI F+DDEIP GGMGSTKAL ITT CKG  LPSVL+DNGSALNVLPLSTL RLPID +
Sbjct:  103 NFQAGSGSNLGDNPANLVVPDFDMIEETRA--EASRQLEDRCKRLEEEVKALKNASHRPGVKVKELSLVPGLILPPKFKTPEFEKYNGTSCPEAHITMFCRRMAGYAENDQLLIHCFQDSLVGSVAKWYNQLTRAQVNSWEDLAQAFTKQYGHVTEIVPDRITLQNIEKKPNEDFRQYAQRWREVATQVQPPLSEKETVKLFISTLRAPFITHMVGSTTQSFTDIVLAGEMIENAIRGVRIEAGEATRRPIPRKKDNEVNNMSTYSKGYPKAVTVNSPKVVAVKQQGTTGQEPGPRPNFERPQFTPIPITYGEMYQRLFNAHIVAPYYLKPLQPPFPKWYNPNAECEYHAGITGHSIENCTAFKKVVEKFIKMGIIELDDLPG--NPLPNHGDGAVNMIRKDRARKTKEDISDVRTPLMIVWGEMVKRGLIKSSLEGRSERPGNYCAFHGAEGHKIQDCTEFRLLVQGFMDNKELEFYEENSEEGDIHATEGELTRQKAKLPKIIISRPSNLGSKAQAIPKIIIKKPASFPYEEDKKVPWSYNCNVAMPGVGGSTSTENENQKEGFHTRSGRRYDPAGVRINLAKSKAMTVEPEEEPSTLINMPVREEEAKEFLKFLKHSEYSVVEQLHKQPARISVLALLLSSEVHRKALMKVLNETYVTKDISVSKLDRLIGNISADNFISFSDDEIPSGGMGSTKALHITTHCKGSILPSVLVDNGSALNVLPLSTLKRLPIDSS 836          

HSP 2 Score: 247.284 bits (630), Expect = 3.338e-64
Identity = 116/155 (74.84%), Postives = 135/155 (87.10%), Query Frame = 0
Query:  704 AVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIECSFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            AVPSSLHQKLKLV +GRLVTINA+EDIIATVTNDAPY+E NEEAIECSF SLEFVNATF+ EG ++  P+IS+TTRMGLQMM+ KGALPG+GLGR LQG +QVP  KEK+DRF LGF+P+A + ++EMEKK ERRRARL GEE+ WE M FPHI+
Sbjct:  897 AVPSSLHQKLKLVADGRLVTINAEEDIIATVTNDAPYVEANEEAIECSFRSLEFVNATFVREGAKIPAPKISKTTRMGLQMMISKGALPGRGLGRCLQGEVQVPSPKEKRDRFGLGFKPNANEMRREMEKKQERRRARLKGEEIMWEPMTFPHIA 1051          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8IDX0_GOSHI (Uncharacterized protein LOC107895656 OS=Gossypium hirsutum OX=3635 GN=LOC107895656 PE=4 SV=1)

HSP 1 Score: 942.184 bits (2434), Expect = 0.000e+0
Identity = 477/704 (67.76%), Postives = 540/704 (76.70%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNHYAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSD---------SVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLST 695
            MNFQ GSG N GDNP N +IPDLD+AE+E   +E  +Q E+ CRWLE+K +A+ENTD H GIDAKDLSLV DL+LPHKFKM EFEKYNGT+CPEAHI+MFCR +TGYVNNDQLLIHCFQDSLVGAA++WYNQLS ARI SWRDL Q FM+QYNH   RWREVA+QV+PPLLEKETTMLFI+TLKAPFITHMIGS  KSFA+IVM GEMIENAI+ G+IE GE  KR APR+K+NEVNN ++YN   SKAITVSQP+  T GQQ S +Q S                               +PF+LKPLQP YPK YD+NA+C+YH GI GHSIENCT FKK VERLIK+G+VKFDDT S ENLLPNHGD+GVN IG + +R+IKED+ EV+TP  ++ +         S E    VRDYCEFH  EGHEIQE  EF+ L+QSLM+NKELEFYE GS  G IC  EG   NQ  N  RIII+ P N E      PKVII K VSFPYKD K VPWNY+CNVT+P  E +AS SKE Q+EGS TRSG+ Y    V  EP K+K  A ++ KG E  +NEPVKEEEA+EFLKFLKHSEYSVVE+L KQ ARIS+LALLLSS+VH EAL+KVLNETYVT DISINKLDRLVSNISADNFIYFNDDEIPP  MGS KAL ITTRCKGYTLPSVLIDNG ALNV+PLST
Sbjct:    1 MNFQTGSGFNSGDNPANLIIPDLDVAEKEEMRLESSRQLEEHCRWLEDKFKALENTDNHQGIDAKDLSLVPDLVLPHKFKMPEFEKYNGTTCPEAHISMFCRRITGYVNNDQLLIHCFQDSLVGAAARWYNQLSRARIGSWRDLTQPFMQQYNH---RWREVAMQVQPPLLEKETTMLFIHTLKAPFITHMIGSTTKSFANIVMAGEMIENAIKGGKIE-GEAVKRPAPRRKKNEVNNMNSYN---SKAITVSQPRATTVGQQDSQKQGS-------------------------------APFHLKPLQPLYPKRYDANAKCEYHAGISGHSIENCTGFKKAVERLIKIGVVKFDDTSSTENLLPNHGDQGVNTIGDTDMRKIKEDVIEVRTPMKMILEEMVNREMIISKERNRRVRDYCEFHAEEGHEIQEWDEFKALIQSLMNNKELEFYEAGSYKGRICTLEGGPKNQ--NRLRIIISLPRNNEVEMPTVPKVIIHKLVSFPYKDNKRVPWNYNCNVTMPEKEDIASTSKEVQDEGSYTRSGKRYDVEGVGVEPAKAK--AFDKGKGTEILVNEPVKEEEAREFLKFLKHSEYSVVEQLRKQLARISILALLLSSKVHHEALIKVLNETYVTNDISINKLDRLVSNISADNFIYFNDDEIPPESMGSAKALHITTRCKGYTLPSVLIDNGPALNVMPLST 662          
BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Match: A0A1U8HTZ8_GOSHI (Uncharacterized protein LOC107887707 OS=Gossypium hirsutum OX=3635 GN=LOC107887707 PE=4 SV=1)

HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 462/686 (67.35%), Postives = 535/686 (77.99%), Query Frame = 0
Query:    1 MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKLRAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMFCRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMKQYNHYAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFADIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAITVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHKVSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKMGIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSD---------SVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRGGIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKDKKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPVKSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSARISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYFNDDEIPPGGMGSTKALPITTRCKGYTL 677
            MN+   SG NLGDNPTNP+I DLDMAE++    E  KQ E+RCRWLEEK +A+E  D H G+DAKDLSLV DL+LPHKFKM EFEKYN T+CPEAHITMFCR MTG VN+DQLLIHCFQDSLVGAA+KWYNQLS  +INSWRDLAQAFM+QYNH           V+ PLLEKETTMLFINTLKAPFITHMIGS  KSFADIVMVGEMIENAIR G+IE GE  KRSAPR+K+NEVNNTST+N   SKAITV QPK     QQ   RQES T+QN+E++QFTPIP+TYRELYQSL+D H ++PF+LKPLQP YPKWYD+NA+C+YH GIPGHSIENCT FKK +ERLIKMG+VKFD+T + ENLLPNH D+GVNAIG++  RR+KE +AE++TP  ++ +         S E  +G RDYCE++  EGHEIQEC EF+ L+QSLMDNKELEFYE GS    IC  EG   NQ  N PRIII+ P + E    + PKVII KPVSFPY+D K VPW+Y+C V++   E +AS SKE Q EGS TR+G+ Y  V +R EP K+K+++ E+E   E  + EPVKEE AKEFLKFLKHSEYSVVE+L KQ ARISVLALLLSSEVHR+ALMKVLNE YVT DIS+NKLDRLV+NISADNFIYFNDDEIPPG  GS   +P   R     L
Sbjct:   81 MNYPASSGFNLGDNPTNPLILDLDMAEKKDLRAEAAKQLEERCRWLEEKFKALEIVDGHHGVDAKDLSLVPDLVLPHKFKMPEFEKYNRTTCPEAHITMFCRRMTGNVNSDQLLIHCFQDSLVGAAAKWYNQLSHTKINSWRDLAQAFMQQYNH-----------VQLPLLEKETTMLFINTLKAPFITHMIGSTTKSFADIVMVGEMIENAIRGGKIE-GEAIKRSAPRRKDNEVNNTSTFN---SKAITVGQPKAAAVEQQNYQRQESDTRQNTERMQFTPIPVTYRELYQSLYDAHAIAPFHLKPLQPPYPKWYDANARCEYHPGIPGHSIENCTGFKKAMERLIKMGVVKFDNTLNTENLLPNHSDQGVNAIGEASARRMKESVAEMRTPMRMIWEEMVKREMTISKERNKGARDYCEYYAEEGHEIQECDEFKALIQSLMDNKELEFYEAGSNEKHICTLEGAPKNQ--NRPRIIISLPGSNEVETPMVPKVIIHKPVSFPYRDNKRVPWSYNCRVSMSEREDIASASKEAQVEGSHTRNGKRYNMVGIREEPTKAKSVSTEKEA--EVLVKEPVKEEGAKEFLKFLKHSEYSVVEQLRKQPARISVLALLLSSEVHRDALMKVLNEAYVTHDISVNKLDRLVNNISADNFIYFNDDEIPPGE-GSELLVPKIARATRMAL 746          

HSP 2 Score: 120.168 bits (300), Expect = 6.821e-24
Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 0
Query:  765 EGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHLQGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWELMAFPHIS 858
            EG+E+ VP+I+R TRM L+MM GKGALP KGLG++LQ G Q+P LKEK+DRF LGF+PD +QR KE+EK+ E R+A L+  EV+WE M F  IS
Sbjct:  729 EGSELLVPKIARATRMALRMMAGKGALPRKGLGKYLQRGTQIPKLKEKRDRFGLGFKPDYKQR-KEIEKRQEGRKAHLNRREVEWEPMTFHPIS 821          
The following BLAST results are available for this feature:
BLAST of Gstu01G009300.1 vs.
Analysis Date: 2023-09-18 (BLASTP of HAU v1.0 Gossypium sturtianum (C1) proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Gstu01G009300.1 vs.
Analysis Date: 2023-09-18 (BLASTP of HAU v1.0 Gossypium sturtianum (C1) proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Gstu01G009300.1 vs. ExPASy TrEMBL
Analysis Date: 2023-09-20 (BLASTP of HAU v1.0 Gossypium bickii (G1) proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A1U8IHN8_GOSHI0.000e+062.82Uncharacterized protein LOC107894651 OS=Gossypium ... [more]
A0A5B6UPT1_9ROSI0.000e+066.67Gag/pol polyprotein OS=Gossypium australe OX=47621... [more]
A0A1U8M3D9_GOSHI0.000e+065.49Uncharacterized protein LOC107932618 OS=Gossypium ... [more]
A0A1U8LF56_GOSHI0.000e+056.71Uncharacterized protein LOC107925794 OS=Gossypium ... [more]
A0A1U8IDT0_GOSHI0.000e+057.91Uncharacterized protein LOC107895482 OS=Gossypium ... [more]
A0A5B6W1X5_9ROSI0.000e+055.43Retrotransposon gag domain-containing protein OS=G... [more]
A0A8J5Z9E5_9ROSI5.967e-4964.66G-patch domain-containing protein OS=Gossypium ano... [more]
A0A5B6X7M1_9ROSI3.338e-6464.36Gag/pol polyprotein OS=Gossypium australe OX=47621... [more]
A0A1U8IDX0_GOSHI0.000e+067.76Uncharacterized protein LOC107895656 OS=Gossypium ... [more]
A0A1U8HTZ8_GOSHI6.821e-2467.35Uncharacterized protein LOC107887707 OS=Gossypium ... [more]
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InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium sturtianum (C1) proteins
Date Performed: 2023-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR32108DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHAcoord: 125..858
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 777..825
score: 9.24455

Sequences
The following sequences are available for this feature:

mRNA sequence

>Gstu01G009300.1_C1_HAU_v1 ID=Gstu01G009300.1_C1_HAU_v1; Name=Gstu01G009300.1; organism=Gossypium sturtianum; type=mRNA; length=2577bp
ATGAACTTCCAGGTTGGCTCAGGCTCTAACCTAGGAGATAATCCAACCAA
TCCCGTTATTCCTGATTTGGATATGGCCGAAAGGGAAGGGGCAACAATGG
AACTTCCAAAGCAGTTTGAGGACCGATGTAGGTGGTTGGAAGAAAAATTA
AGGGCAATGGAAAATACTGATAAACATGGTGGAATTGATGCTAAGGATTT
GAGTTTGGTCATAGACTTGATACTTCCCCATAAGTTTAAAATGCTGGAAT
TTGAAAAGTATAACGGGACTAGTTGTCCCGAGGCTCACATCACTATGTTC
TGCAGGTGGATGACTGGGTATGTTAATAACGATCAACTATTGATCCATTG
TTTCCAAGATAGCTTGGTGGGGGCAGCATCCAAGTGGTACAACCAATTGA
GCTGTGCTAGGATTAATTCTTGGAGAGACCTAGCACAAGCATTTATGAAA
CAATACAATCATTATGCACAAAGATGGAGGGAAGTTGCCATACAAGTTAA
GCCACCGCTTTTAGAAAAGGAAACCACGATGCTTTTCATCAATACTCTAA
AAGCCCCATTCATTACTCACATGATAGGAAGTGCCATAAAGAGCTTTGCG
GATATAGTAATGGTGGGAGAAATGATTGAAAATGCCATAAGGAGTGGCAG
GATAGAAGCAGGGGAGAACACCAAAAGGTCAGCTCCAAGAAAAAAGGAGA
ATGAGGTGAATAATACGAGCACATATAACAAAGGGTACTCGAAGGCAATC
ACTGTTAGCCAACCAAAAGTAATCACCGATGGGCAACAAGGTTCGATAAG
GCAGGAATCAGGTACAAAGCAAAACTCTGAAAAGCTCCAATTTACACCAA
TCCCAATGACGTATAGGGAGTTGTATCAAAGTTTATTTGACACACACAAG
GTGTCCCCATTTTATCTAAAACCGTTACAGCCCTCATATCCCAAATGGTA
TGATTCAAACGCTCAATGTGACTATCATGTGGGAATACCAGGGCATTCAA
TAGAAAACTGCACTGCTTTTAAAAAGGTAGTCGAGAGACTTATTAAGATG
GGGATCGTAAAATTTGATGATACACCAAGTGGTGAAAATCTATTACCTAA
CCATGGAGATAAGGGGGTAAATGCGATTGGTAAGAGTATCGTGAGAAGGA
TCAAGGAGGATATTGCGGAGGTAAAAACCCCAGGATTGATAGTATCAGAT
TCTGTGGAAGGATGCGAAGGAGTAAGGGACTATTGTGAGTTCCACAAAGC
AGAAGGGCATGAAATCCAAGAATGTGTTGAGTTCAGGGTCCTGGTGCAAA
GCCTTATGGATAATAAGGAATTAGAATTTTATGAAGAAGGCTCAAGGGGA
GGAATTATATGCGCGACAGAAGGAGAGTTGACAAACCAAAAGGTGAATTA
TCCGAGGATCATCATCACCCGACCAACAAACATGGAAGGAGGAGCACAAA
TAGCGCCAAAGGTTATAATCCAGAAACCTGTTTCCTTTCCTTATAAGGAT
AAGAAAATGGTACCTTGGAATTACGACTGTAATGTGACAATACCAGGAGG
GGAAATCCTAGCTAGCGATTCCAAGGAGGAACAAAATGAAGGATCTTGCA
CACGTAGTGGAAGGCATTACGGCTCGGTAAACGTCAGAACAGAACCAGTG
AAATCAAAGACCTTGGCAGTTGAACGAGAGAAAGGACCTGAGGCATTTAT
CAATGAACCAGTAAAGGAGGAAGAGGCTAAAGAATTTCTGAAATTCTTGA
AGCACAGTGAATACAGTGTGGTAGAGAAACTGTGCAAACAATCGGCTCGC
ATATCAGTGCTAGCATTGCTTTTAAGCTCAGAAGTACATCGCGAGGCATT
GATGAAAGTGTTGAATGAAACCTATGTTACTAAAGATATATCTATCAATA
AACTTGATCGTCTGGTTAGTAATATAAGTGCCGACAACTTTATTTATTTC
AATGATGATGAAATTCCACCTGGGGGCATGGGATCAACTAAGGCTTTGCC
CATCACTACTCGTTGCAAGGGATATACCCTGCCAAGTGTGTTAATTGATA
ATGGATCAGCTTTGAATGTCTTACCATTGTCTACACTGAATAGATTGCCT
ATAGACAGAGCAGTGCCTTCATCATTACATCAAAAATTGAAACTAGTGAC
AGAAGGTCGACTAGTTACTATAAATGCTAAAGAGGACATCATAGCAACTG
TTACCAACGACGCGCCATATTTAGAGACAAATGAGGAGGCCATTGAGTGT
TCCTTTCTGTCTTTAGAATTTGTGAACGCAACATTCATTTTGGAAGGGAA
TGAGGTTTCAGTGCCTAGGATATCCAGGACCACGAGAATGGGCTTGCAAA
TGATGGTGGGGAAAGGAGCCTTACCGGGAAAAGGACTGGGTAGACATCTC
CAAGGAGGGATTCAGGTTCCGATGCTGAAAGAGAAAAAAGATCGTTTTAG
CTTGGGTTTCAGGCCAGATGCTAGACAAAGGAAGAAAGAGATGGAAAAGA
AGTATGAGAGAAGGAGAGCACGGTTGAGTGGTGAAGAAGTCAAGTGGGAA
TTAATGGCATTCCCTCACATATCCTAG
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protein sequence of Gstu01G009300.1_C1_HAU_v1

>Gstu01G009300.1_C1_HAU_v1 ID=Gstu01G009300.1_C1_HAU_v1; Name=Gstu01G009300.1_C1_HAU_v1; organism=Gossypium sturtianum; type=polypeptide; length=858bp
MNFQVGSGSNLGDNPTNPVIPDLDMAEREGATMELPKQFEDRCRWLEEKL
RAMENTDKHGGIDAKDLSLVIDLILPHKFKMLEFEKYNGTSCPEAHITMF
CRWMTGYVNNDQLLIHCFQDSLVGAASKWYNQLSCARINSWRDLAQAFMK
QYNHYAQRWREVAIQVKPPLLEKETTMLFINTLKAPFITHMIGSAIKSFA
DIVMVGEMIENAIRSGRIEAGENTKRSAPRKKENEVNNTSTYNKGYSKAI
TVSQPKVITDGQQGSIRQESGTKQNSEKLQFTPIPMTYRELYQSLFDTHK
VSPFYLKPLQPSYPKWYDSNAQCDYHVGIPGHSIENCTAFKKVVERLIKM
GIVKFDDTPSGENLLPNHGDKGVNAIGKSIVRRIKEDIAEVKTPGLIVSD
SVEGCEGVRDYCEFHKAEGHEIQECVEFRVLVQSLMDNKELEFYEEGSRG
GIICATEGELTNQKVNYPRIIITRPTNMEGGAQIAPKVIIQKPVSFPYKD
KKMVPWNYDCNVTIPGGEILASDSKEEQNEGSCTRSGRHYGSVNVRTEPV
KSKTLAVEREKGPEAFINEPVKEEEAKEFLKFLKHSEYSVVEKLCKQSAR
ISVLALLLSSEVHREALMKVLNETYVTKDISINKLDRLVSNISADNFIYF
NDDEIPPGGMGSTKALPITTRCKGYTLPSVLIDNGSALNVLPLSTLNRLP
IDRAVPSSLHQKLKLVTEGRLVTINAKEDIIATVTNDAPYLETNEEAIEC
SFLSLEFVNATFILEGNEVSVPRISRTTRMGLQMMVGKGALPGKGLGRHL
QGGIQVPMLKEKKDRFSLGFRPDARQRKKEMEKKYERRRARLSGEEVKWE
LMAFPHIS
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mRNA from alignment at Chr01:34266982..34269846+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gstu01G009300.1_C1_HAU_v1 ID=Gstu01G009300.1_C1_HAU_v1; Name=Gstu01G009300.1; organism=Gossypium sturtianum; type=mRNA; length=2865bp; location=Sequence derived from: Chr01:34266982..34269846+ (Gossypium sturtianum
ATGAACTTCCAGGTTGGCTCAGGCTCTAACCTAGGAGATAATCCAACCAA TCCCGTTATTCCTGATTTGGATATGGCCGAAAGGGAAGGGGCAACAATGG AACTTCCAAAGCAGTTTGAGGACCGATGTAGGTGGTTGGAAGAAAAATTA AGGGCAATGGAAAATACTGATAAACATGGTGGAATTGATGCTAAGGATTT GAGTTTGGTCATAGACTTGATACTTCCCCATAAGTTTAAAATGCTGGAAT TTGAAAAGTATAACGGGACTAGTTGTCCCGAGGCTCACATCACTATGTTC TGCAGGTGGATGACTGGGTATGTTAATAACGATCAACTATTGATCCATTG TTTCCAAGATAGCTTGGTGGGGGCAGCATCCAAGTGGTACAACCAATTGA GCTGTGCTAGGATTAATTCTTGGAGAGACCTAGCACAAGCATTTATGAAA CAATACAATCATGTGACAGACATGACGCCTGACAGAATCACCTTGCAAAA CATGGAGAAGAAATCAAATGAAAGCTTCAGGTAGTATGCACAAAGATGGA GGGAAGTTGCCATACAAGTTAAGCCACCGCTTTTAGAAAAGGAAACCACG ATGCTTTTCATCAATACTCTAAAAGCCCCATTCATTACTCACATGATAGG AAGTGCCATAAAGAGCTTTGCGGATATAGTAATGGTGGGAGAAATGATTG AAAATGCCATAAGGAGTGGCAGGATAGAAGCAGGGGAGAACACCAAAAGG TCAGCTCCAAGAAAAAAGGAGAATGAGGTGAATAATACGAGCACATATAA CAAAGGGTACTCGAAGGCAATCACTGTTAGCCAACCAAAAGTAATCACCG ATGGGCAACAAGGTTCGATAAGGCAGGAATCAGGTACAAAGCAAAACTCT GAAAAGCTCCAATTTACACCAATCCCAATGACGTATAGGGAGTTGTATCA AAGTTTATTTGACACACACAAGGTGTCCCCATTTTATCTAAAACCGTTAC AGCCCTCATATCCCAAATGGTATGATTCAAACGCTCAATGTGACTATCAT GTGGGAATACCAGGGCATTCAATAGAAAACTGCACTGCTTTTAAAAAGGT AGTCGAGAGACTTATTAAGATGGGGATCGTAAAATTTGATGATACACCAA GTGGTGAAAATCTATTACCTAACCATGGAGATAAGGGGGTAAATGCGATT GGTAAGAGTATCGTGAGAAGGATCAAGGAGGATATTGCGGAGGTAAAAAC CCCGTTGAGAATTGTCTAGAGAGAAATGGTAGGAAGAGGATTGATAGTAT CAGATTCTGTGGAAGGATGCGAAGGAGTAAGGGACTATTGTGAGTTCCAC AAAGCAGAAGGGCATGAAATCCAAGAATGTGTTGAGTTCAGGGTCCTGGT GCAAAGCCTTATGGATAATAAGGAATTAGAATTTTATGAAGAAGGCTCAA GGGGAGGAATTATATGCGCGACAGAAGGAGAGTTGACAAACCAAAAGGTG AATTATCCGAGGATCATCATCACCCGACCAACAAACATGGAAGGAGGAGC ACAAATAGCGCCAAAGGTTATAATCCAGAAACCTGTTTCCTTTCCTTATA AGGATAAGAAAATGGTACCTTGGAATTACGACTGTAATGTGACAATACCA GGAGGGGAAATCCTAGCTAGCGATTCCAAGGAGGAACAAAATGAAGGATC TTGCACACGTAGTGGAAGGCATTACGGCTCGGTAAACGTCAGAACAGAAC CAGTGAAATCAAAGACCTTGGCAGTTGAACGAGAGAAAGGACCTGAGGCA TTTATCAATGAACCAGTAAAGGAGGAAGAGGCTAAAGAATTTCTGAAATT CTTGAAGCACAGTGAATACAGTGTGGTAGAGAAACTGTGCAAACAATCGG CTCGCATATCAGTGCTAGCATTGCTTTTAAGCTCAGAAGTACATCGCGAG GCATTGATGAAAGTGTTGAATGAAACCTATGTTACTAAAGATATATCTAT CAATAAACTTGATCGTCTGGTTAGTAATATAAGTGCCGACAACTTTATTT ATTTCAATGATGATGAAATTCCACCTGGGGGCATGGGATCAACTAAGGCT TTGCCCATCACTACTCGTTGCAAGGGATATACCCTGCCAAGTGTGTTAAT TGATAATGGATCAGCTTTGAATGTCTTACCATTGTCTACACTGAATAGAT TGCCTATAGACAGTTCTCATATGAAGACATGCCAGAACATAGTGAGAGCA TTTGATGGCACTGAGAGAAGAGTAATGGGAAGAATCGACATACCTTTTTT TATTGGACCAAACACATATGAAGTAGATTTTCTGGTAATAGACATCAAGC CCTCCTACAATTGCTTGTTAGGGAGGCCCTGGATACATTCGGCAGGAGCA GTGCCTTCATCATTACATCAAAAATTGAAACTAGTGACAGAAGGTCGACT AGTTACTATAAATGCTAAAGAGGACATCATAGCAACTGTTACCAACGACG CGCCATATTTAGAGACAAATGAGGAGGCCATTGAGTGTTCCTTTCTGTCT TTAGAATTTGTGAACGCAACATTCATTTTGGAAGGGAATGAGGTTTCAGT GCCTAGGATATCCAGGACCACGAGAATGGGCTTGCAAATGATGGTGGGGA AAGGAGCCTTACCGGGAAAAGGACTGGGTAGACATCTCCAAGGAGGGATT CAGGTTCCGATGCTGAAAGAGAAAAAAGATCGTTTTAGCTTGGGTTTCAG GCCAGATGCTAGACAAAGGAAGAAAGAGATGGAAAAGAAGTATGAGAGAA GGAGAGCACGGTTGAGTGGTGAAGAAGTCAAGTGGGAATTAATGGCATTC CCTCACATATCCTAG
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Coding sequence (CDS) from alignment at Chr01:34266982..34269846+

>Gstu01G009300.1_C1_HAU_v1 ID=Gstu01G009300.1_C1_HAU_v1; Name=Gstu01G009300.1; organism=Gossypium sturtianum; type=CDS; length=2577bp; location=Sequence derived from: Chr01:34266982..34269846+ (Gossypium sturtianum
ATGAACTTCCAGGTTGGCTCAGGCTCTAACCTAGGAGATAATCCAACCAA
TCCCGTTATTCCTGATTTGGATATGGCCGAAAGGGAAGGGGCAACAATGG
AACTTCCAAAGCAGTTTGAGGACCGATGTAGGTGGTTGGAAGAAAAATTA
AGGGCAATGGAAAATACTGATAAACATGGTGGAATTGATGCTAAGGATTT
GAGTTTGGTCATAGACTTGATACTTCCCCATAAGTTTAAAATGCTGGAAT
TTGAAAAGTATAACGGGACTAGTTGTCCCGAGGCTCACATCACTATGTTC
TGCAGGTGGATGACTGGGTATGTTAATAACGATCAACTATTGATCCATTG
TTTCCAAGATAGCTTGGTGGGGGCAGCATCCAAGTGGTACAACCAATTGA
GCTGTGCTAGGATTAATTCTTGGAGAGACCTAGCACAAGCATTTATGAAA
CAATACAATCATTATGCACAAAGATGGAGGGAAGTTGCCATACAAGTTAA
GCCACCGCTTTTAGAAAAGGAAACCACGATGCTTTTCATCAATACTCTAA
AAGCCCCATTCATTACTCACATGATAGGAAGTGCCATAAAGAGCTTTGCG
GATATAGTAATGGTGGGAGAAATGATTGAAAATGCCATAAGGAGTGGCAG
GATAGAAGCAGGGGAGAACACCAAAAGGTCAGCTCCAAGAAAAAAGGAGA
ATGAGGTGAATAATACGAGCACATATAACAAAGGGTACTCGAAGGCAATC
ACTGTTAGCCAACCAAAAGTAATCACCGATGGGCAACAAGGTTCGATAAG
GCAGGAATCAGGTACAAAGCAAAACTCTGAAAAGCTCCAATTTACACCAA
TCCCAATGACGTATAGGGAGTTGTATCAAAGTTTATTTGACACACACAAG
GTGTCCCCATTTTATCTAAAACCGTTACAGCCCTCATATCCCAAATGGTA
TGATTCAAACGCTCAATGTGACTATCATGTGGGAATACCAGGGCATTCAA
TAGAAAACTGCACTGCTTTTAAAAAGGTAGTCGAGAGACTTATTAAGATG
GGGATCGTAAAATTTGATGATACACCAAGTGGTGAAAATCTATTACCTAA
CCATGGAGATAAGGGGGTAAATGCGATTGGTAAGAGTATCGTGAGAAGGA
TCAAGGAGGATATTGCGGAGGTAAAAACCCCAGGATTGATAGTATCAGAT
TCTGTGGAAGGATGCGAAGGAGTAAGGGACTATTGTGAGTTCCACAAAGC
AGAAGGGCATGAAATCCAAGAATGTGTTGAGTTCAGGGTCCTGGTGCAAA
GCCTTATGGATAATAAGGAATTAGAATTTTATGAAGAAGGCTCAAGGGGA
GGAATTATATGCGCGACAGAAGGAGAGTTGACAAACCAAAAGGTGAATTA
TCCGAGGATCATCATCACCCGACCAACAAACATGGAAGGAGGAGCACAAA
TAGCGCCAAAGGTTATAATCCAGAAACCTGTTTCCTTTCCTTATAAGGAT
AAGAAAATGGTACCTTGGAATTACGACTGTAATGTGACAATACCAGGAGG
GGAAATCCTAGCTAGCGATTCCAAGGAGGAACAAAATGAAGGATCTTGCA
CACGTAGTGGAAGGCATTACGGCTCGGTAAACGTCAGAACAGAACCAGTG
AAATCAAAGACCTTGGCAGTTGAACGAGAGAAAGGACCTGAGGCATTTAT
CAATGAACCAGTAAAGGAGGAAGAGGCTAAAGAATTTCTGAAATTCTTGA
AGCACAGTGAATACAGTGTGGTAGAGAAACTGTGCAAACAATCGGCTCGC
ATATCAGTGCTAGCATTGCTTTTAAGCTCAGAAGTACATCGCGAGGCATT
GATGAAAGTGTTGAATGAAACCTATGTTACTAAAGATATATCTATCAATA
AACTTGATCGTCTGGTTAGTAATATAAGTGCCGACAACTTTATTTATTTC
AATGATGATGAAATTCCACCTGGGGGCATGGGATCAACTAAGGCTTTGCC
CATCACTACTCGTTGCAAGGGATATACCCTGCCAAGTGTGTTAATTGATA
ATGGATCAGCTTTGAATGTCTTACCATTGTCTACACTGAATAGATTGCCT
ATAGACAGAGCAGTGCCTTCATCATTACATCAAAAATTGAAACTAGTGAC
AGAAGGTCGACTAGTTACTATAAATGCTAAAGAGGACATCATAGCAACTG
TTACCAACGACGCGCCATATTTAGAGACAAATGAGGAGGCCATTGAGTGT
TCCTTTCTGTCTTTAGAATTTGTGAACGCAACATTCATTTTGGAAGGGAA
TGAGGTTTCAGTGCCTAGGATATCCAGGACCACGAGAATGGGCTTGCAAA
TGATGGTGGGGAAAGGAGCCTTACCGGGAAAAGGACTGGGTAGACATCTC
CAAGGAGGGATTCAGGTTCCGATGCTGAAAGAGAAAAAAGATCGTTTTAG
CTTGGGTTTCAGGCCAGATGCTAGACAAAGGAAGAAAGAGATGGAAAAGA
AGTATGAGAGAAGGAGAGCACGGTTGAGTGGTGAAGAAGTCAAGTGGGAA
TTAATGGCATTCCCTCACATATCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding