maker-Dt_09-Msloci-g-11.396-mRNA-1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: ref|XP_040956696.1| (E3 ubiquitin-protein ligase PUB24-like [Gossypium hirsutum]) HSP 1 Score: 361.688 bits (927), Expect = 5.480e-126 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|KAG8483799.1| (hypothetical protein CXB51_023472 [Gossypium anomalum]) HSP 1 Score: 364.385 bits (934), Expect = 8.936e-125 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLIS+FSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 147 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISRFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 323
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|MBA0800627.1| (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 365.155 bits (936), Expect = 1.249e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 182 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 358
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: ref|XP_012485723.1| (PREDICTED: E3 ubiquitin-protein ligase PUB24 isoform X2 [Gossypium raimondii] >gb|KJB36259.1| hypothetical protein B456_006G149000 [Gossypium raimondii]) HSP 1 Score: 364.77 bits (935), Expect = 1.212e-123 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|MBA0615675.1| (hypothetical protein [Gossypium davidsonii] >gb|MBA0650907.1| hypothetical protein [Gossypium klotzschianum] >gb|TYI65349.1| hypothetical protein E1A91_D09G151500v1 [Gossypium mustelinum]) HSP 1 Score: 364.385 bits (934), Expect = 1.267e-123 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|KAB2013284.1| (hypothetical protein ES319_D09G146800v1 [Gossypium barbadense] >gb|TYG54098.1| hypothetical protein ES288_D09G162100v1 [Gossypium darwinii] >gb|TYH54274.1| hypothetical protein ES332_D09G156900v1 [Gossypium tomentosum]) HSP 1 Score: 364.385 bits (934), Expect = 1.281e-123 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|MBA0713291.1| (hypothetical protein [Gossypium laxum]) HSP 1 Score: 363.999 bits (933), Expect = 2.310e-123 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTME+LRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEVLRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|MBA0857876.1| (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 363.999 bits (933), Expect = 2.493e-123 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTME+LRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEVLRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: ref|XP_012485722.1| (PREDICTED: E3 ubiquitin-protein ligase PUB24 isoform X1 [Gossypium raimondii]) HSP 1 Score: 363.999 bits (933), Expect = 3.028e-123 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 246 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 422
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Match: gb|MBA0830200.1| (hypothetical protein [Gossypium armourianum]) HSP 1 Score: 363.229 bits (931), Expect = 4.212e-123 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPC+DKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCMDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J9GSR1_9ROSI (U-box domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_011050 PE=4 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 6.009e-125 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 182 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 358
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0D2RWL2_GOSRA (RING-type E3 ubiquitin transferase OS=Gossypium raimondii OX=29730 GN=B456_006G149000 PE=4 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 5.833e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2TJL0_GOSMU (RING-type E3 ubiquitin transferase OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G151500v1 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.093e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8UKC3_9ROSI (RING-type E3 ubiquitin transferase OS=Gossypium klotzschianum OX=34286 GN=Goklo_018282 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.093e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8RPR2_GOSDV (RING-type E3 ubiquitin transferase OS=Gossypium davidsonii OX=34287 GN=Godav_015794 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.093e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2BC08_GOSDA (RING-type E3 ubiquitin transferase OS=Gossypium darwinii OX=34276 GN=ES288_D09G162100v1 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.160e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5J5Q3R5_GOSBA (RING-type E3 ubiquitin transferase OS=Gossypium barbadense OX=3634 GN=ES319_D09G146800v1 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.160e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2JID8_GOSTO (RING-type E3 ubiquitin transferase OS=Gossypium tomentosum OX=34277 GN=ES332_D09G156900v1 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 6.160e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8ZNC6_9ROSI (RING-type E3 ubiquitin transferase OS=Gossypium laxum OX=34288 GN=Golax_012333 PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 1.111e-123 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTME+LRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEVLRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J9LH52_GOSSC (RING-type E3 ubiquitin transferase OS=Gossypium schwendimanii OX=34291 GN=Goshw_018493 PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 1.199e-123 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYIK 177
MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTME+LRSHSDDWLKFPCIDKTVLTRYIK
Sbjct: 234 MIVGVLKQCTTRITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEVLRSHSDDWLKFPCIDKTVLTRYIK 410
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy Swiss-Prot
Match: PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.381e-60 Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 13 ITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELG-SPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYI 176
+ +Q + +AL +LL+ W RNR ++V+ GAVS LIELE+ + EKR TEL+LG+L LC CA+GRAE L H+GGIAVVTKR++RVSPAADDRA+ IL+ +SKFS + VV EM+ VGTV KLC +L +DC LKEK EIL+ H D+W KFPCID T+LT+ +
Sbjct: 283 VIKQAVTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEILKDHFDEWKKFPCIDITLLTKLL 447
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.462e-46 Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 12 RITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIEL---ELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRY 175
RI+Q+ +A+H+L++ CPWGRNR VE+G +S +IEL E + E+R E+ + +L LC CA+GRAEFL H IAVV K+I+RVS A DRAV +L + +F AT ++HEML++G V KLC++LQ+ C KEK E+L+ H+ W PC+ K ++ Y
Sbjct: 243 RISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAY 409
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.502e-42 Identity = 71/167 (42.51%), Postives = 107/167 (64.07%), Query Frame = 0
Query: 12 RITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIEL---ELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRY 175
+I+ + SA+ +L+ CPWGRNR VE G +S +IEL + S E+R +E+ + +L LC CA+GRAEFL H IAVV+K+I+RVS +RAV +L + +F AT ++ EML++G V KLC++LQ+ C KEK E+L+ H+ W + PC+ + + Y
Sbjct: 267 QISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCVPRNLYDSY 433
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|22337 (AT3G11840.1 | E3 ubiquitin-protein ligase PUB24-like protein | Chr3:3736578-3738208 REVERSE LENGTH=456 | 201606) HSP 1 Score: 196.823 bits (499), Expect = 2.436e-61 Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 13 ITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIELELG-SPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRYI 176
+ +Q + +AL +LL+ W RNR ++V+ GAVS LIELE+ + EKR TEL+LG+L LC CA+GRAE L H+GGIAVVTKR++RVSPAADDRA+ IL+ +SKFS + VV EM+ VGTV KLC +L +DC LKEK EIL+ H D+W KFPCID T+LT+ +
Sbjct: 283 VIKQAVTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEILKDHFDEWKKFPCIDITLLTKLL 447
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|17838 (AT2G35930.1 | plant U-box 23 | Chr2:15083101-15084336 REVERSE LENGTH=411 | 201606) HSP 1 Score: 160.229 bits (404), Expect = 1.496e-47 Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 12 RITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIEL---ELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRY 175
RI+Q+ +A+H+L++ CPWGRNR VE+G +S +IEL E + E+R E+ + +L LC CA+GRAEFL H IAVV K+I+RVS A DRAV +L + +F AT ++HEML++G V KLC++LQ+ C KEK E+L+ H+ W PC+ K ++ Y
Sbjct: 243 RISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAY 409
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|27603 (AT3G52450.1 | plant U-box 22 | Chr3:19440943-19442250 REVERSE LENGTH=435 | 201606) HSP 1 Score: 149.443 bits (376), Expect = 2.560e-43 Identity = 71/167 (42.51%), Postives = 107/167 (64.07%), Query Frame = 0
Query: 12 RITQQGINSALHVLLDACPWGRNRLMMVESGAVSALIEL---ELGSPEKRTTELILGILFHLCSCADGRAEFLRHKGGIAVVTKRIMRVSPAADDRAVLILSLISKFSATSWVVHEMLEVGTVTKLCMLLQLDCATYLKEKTMEILRSHSDDWLKFPCIDKTVLTRY 175
+I+ + SA+ +L+ CPWGRNR VE G +S +IEL + S E+R +E+ + +L LC CA+GRAEFL H IAVV+K+I+RVS +RAV +L + +F AT ++ EML++G V KLC++LQ+ C KEK E+L+ H+ W + PC+ + + Y
Sbjct: 267 QISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCVPRNLYDSY 433 The following BLAST results are available for this feature:
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. NCBI nr
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs NCBI nr) Total hits: 10
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt TrEMBL) Total hits: 10
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. ExPASy Swiss-Prot
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt Swissprot) Total hits: 3
BLAST of maker-Dt_09-Msloci-g-11.396-mRNA-1 vs. Araport11
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins
Date Performed: 2022-08-09
Sequences
The
following sequences are available for this feature:
mRNA sequence >maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_09-Msloci-g-11.396-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=534bpback to top protein sequence of maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1 >maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1; organism=Gossypium hirsutum; type=polypeptide; length=177bpback to top mRNA from alignment at Dt09:11094077..11094610+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_09-Msloci-g-11.396-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=534bp; location=Sequence derived from: Dt09:11094077..11094610+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at Dt09:11094077..11094610+ >maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_09-Msloci-g-11.396-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_09-Msloci-g-11.396-mRNA-1; organism=Gossypium hirsutum; type=CDS; length=534bp; location=Sequence derived from: Dt09:11094077..11094610+ (Gossypium hirsutumback to top |