maker-Dt_04-snap-gene-40.36-mRNA-1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|PPE02881.1| (hypothetical protein GOBAR_DD00088 [Gossypium barbadense]) HSP 1 Score: 385.185 bits (988), Expect = 8.400e-131 Identity = 198/244 (81.15%), Postives = 203/244 (83.20%), Query Frame = 0
Query: 108 WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQ-------------MQWVAWKRLLAFENMGAFLLSAG---------TKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQL 329
WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFE QRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNL+ +W+ + +LSA T AKQYSLPNSRVMIHQPLGGAEGGQTDIDIQ
Sbjct: 36 WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFE-QRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLEVDDSCICLIFEYSFFHRRSWELFFLVRELKFLVLSATLAYSFVLFKTSAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQF 278
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|KAG4152161.1| (hypothetical protein ERO13_D04G105201v2 [Gossypium hirsutum]) HSP 1 Score: 327.02 bits (837), Expect = 1.783e-109 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 330
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 193
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: ref|XP_012442447.1| (PREDICTED: floral homeotic protein PMADS 1-like isoform X1 [Gossypium raimondii] >gb|KJB62262.1| hypothetical protein B456_009G408900 [Gossypium raimondii]) HSP 1 Score: 312.383 bits (799), Expect = 1.893e-103 Identity = 155/173 (89.60%), Postives = 156/173 (90.17%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG--------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 330
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSS LAIRERKPPLKRLLTMFLG VRNLEERHANLVM+LDQMQWVAWKRLLAFENMGAFLLS GTK KQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSFLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKVRNLEERHANLVMDLDQMQWVAWKRLLAFENMGAFLLSVGTKGKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 207
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: ref|XP_012442448.1| (PREDICTED: floral homeotic protein PMADS 1-like isoform X2 [Gossypium raimondii]) HSP 1 Score: 289.271 bits (739), Expect = 1.543e-94 Identity = 145/161 (90.06%), Postives = 147/161 (91.30%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPL--KRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 330
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSS LAIRERK + R T VRNLEERHANLVM+LDQMQWVAWKRLLAFENMGAFLLS GTK KQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSFLAIRERKYHVIKTRTDTHKKKVRNLEERHANLVMDLDQMQWVAWKRLLAFENMGAFLLSVGTKGKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 195
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|KAG4152162.1| (hypothetical protein ERO13_D04G105201v2 [Gossypium hirsutum]) HSP 1 Score: 263.848 bits (673), Expect = 5.832e-85 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKASWWS 166
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|KAG4152163.1| (hypothetical protein ERO13_D04G105201v2 [Gossypium hirsutum]) HSP 1 Score: 259.996 bits (663), Expect = 1.635e-83 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 298
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 161
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|KAB2034991.1| (hypothetical protein ES319_D04G121600v1 [Gossypium barbadense] >gb|TYG73785.1| hypothetical protein ES288_D04G129700v1 [Gossypium darwinii]) HSP 1 Score: 258.84 bits (660), Expect = 1.849e-83 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 298
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK
Sbjct: 8 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 134
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: gb|TYI87270.1| (hypothetical protein E1A91_D04G124100v1 [Gossypium mustelinum]) HSP 1 Score: 251.136 bits (640), Expect = 1.281e-79 Identity = 129/156 (82.69%), Postives = 130/156 (83.33%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG------------------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKIKILYLFLLQVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKASWWS 190
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: ref|XP_012442449.1| (PREDICTED: uncharacterized protein LOC105767450 isoform X3 [Gossypium raimondii] >gb|KJB62261.1| hypothetical protein B456_009G408900 [Gossypium raimondii]) HSP 1 Score: 250.366 bits (638), Expect = 2.186e-79 Identity = 126/146 (86.30%), Postives = 128/146 (87.67%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG--------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSS LAIRERKPPLKRLLTMFLG VRNLEERHANLVM+LDQMQWVAWKRLLAFENMGAFLLS GTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSFLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKVRNLEERHANLVMDLDQMQWVAWKRLLAFENMGAFLLSVGTKASWWS 180
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Match: ref|XP_017620496.1| (PREDICTED: transcription factor MYC4-like, partial [Gossypium arboreum]) HSP 1 Score: 250.751 bits (639), Expect = 1.876e-77 Identity = 127/148 (85.81%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSG------------WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAML FTSG GAGDSDHSDLEASVVKEADSSRVVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQK + +
Sbjct: 26 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLSFTSGVILPSSGVVKSSGGAGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYAL 173
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A1U8KZQ9_GOSHI (ATP-dependent Clp protease proteolytic subunit OS=Gossypium hirsutum OX=3635 GN=LOC107920942 PE=3 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 8.578e-110 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 330
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 193
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0D2QWA4_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii OX=29730 GN=B456_009G408900 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 9.106e-104 Identity = 155/173 (89.60%), Postives = 156/173 (90.17%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG--------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 330
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSS LAIRERKPPLKRLLTMFLG VRNLEERHANLVM+LDQMQWVAWKRLLAFENMGAFLLS GTK KQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSFLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKVRNLEERHANLVMDLDQMQWVAWKRLLAFENMGAFLLSVGTKGKQYSLPNSRVMIHQPLGGAEGGQTDIDIQLL 207
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A1U8KUX9_GOSHI (uncharacterized protein LOC107920942 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107920942 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.805e-85 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKASWWS 166
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2CZS1_GOSDA (K-box domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G129700v1 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 8.893e-84 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 298
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK
Sbjct: 8 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 134
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5J5S253_GOSBA (K-box domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G121600v1 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 8.893e-84 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 298
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK
Sbjct: 8 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTK 134
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2VEI1_GOSMU (K-box domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G124100v1 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.161e-80 Identity = 129/156 (82.69%), Postives = 130/156 (83.33%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG------------------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKIKILYLFLLQVRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKASWWS 190
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0D2U2S7_GOSRA (K-box domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_009G408900 PE=4 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.052e-79 Identity = 126/146 (86.30%), Postives = 128/146 (87.67%), Query Frame = 0
Query: 172 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPPLKRLLTMFLG--------------VRNLEERHANLVMNLDQMQWVAWKRLLAFENMGAFLLSAGTKAKQYS 303
GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSS LAIRERKPPLKRLLTMFLG VRNLEERHANLVM+LDQMQWVAWKRLLAFENMGAFLLS GTKA +S
Sbjct: 35 GVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSFLAIRERKPPLKRLLTMFLGYHVIKTRTDTHKKKVRNLEERHANLVMDLDQMQWVAWKRLLAFENMGAFLLSVGTKASWWS 180
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P4MYB5_GOSAR (transcription factor MYC4-like OS=Gossypium arboreum OX=29729 GN=LOC108464735 PE=4 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 9.027e-78 Identity = 127/148 (85.81%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSG------------WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAML FTSG GAGDSDHSDLEASVVKEADSSRVVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQK + +
Sbjct: 26 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLSFTSGVILPSSGVVKSSGGAGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYAL 173
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J9L5P3_GOSSC (BHLH domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_024607 PE=4 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.640e-73 Identity = 127/148 (85.81%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSG------------WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAML FTSG GAGDSDHSDLEASVVKEADSSRVVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQK + +
Sbjct: 373 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLSFTSGVILPSSGVVKSSGGAGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYAL 520
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Match: A0A1U8M3D6_GOSHI (transcription factor MYC2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107933572 PE=4 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 4.795e-73 Identity = 127/148 (85.81%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSG------------WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAML FTSG GAGDSDHSDLEASVVKEADSSRVVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQK + +
Sbjct: 372 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKKRSPNSRGSNEEAMLSFTSGVILPSSGVVKSSGGAGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYAL 519
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC2_SOLLC (Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.399e-46 Identity = 102/158 (64.56%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKR----SGNGNLFTGNSPFAV------ENKKRSPNSRGSNEEAMLLFTSGW------------GAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FD SS+ RNGNSS KPESGEILNFG+S + S N NLFTG S F +NKKRS SRGSNEE ML F SG G DS+HSDLEASVVKEADSSRVVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ + +
Sbjct: 377 FDGSSN-RNGNSSVSC-KPESGEILNFGDSTKKSASSANVNLFTGQSQFGAGEENNNKNKKRSATSRGSNEEGMLSFVSGTVLPSSGMKSGGGGGEDSEHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 532
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC1_SOLLC (Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.194e-34 Identity = 86/151 (56.95%), Postives = 97/151 (64.24%), Query Frame = 0
Query: 38 FDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNLFTGNSPFAVENKK-------RSPNSRGSNEEAMLLFTSG--------WGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
FD SS N N + KPES EILNFG+S + +G G P +E K RS SRG+NEE ML F SG +GDSDHSDLEASVVKEA VVEPEK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ + +
Sbjct: 333 FDGSS---NRNKTGISCKPESREILNFGDSSKRFSGQSQLGPGPGLMEENKNKNKNKKRSLGSRGNNEEGMLSFVSGVILPTSTMGKSGDSDHSDLEASVVKEA----VVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 476
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC2_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana OX=3702 GN=MYC2 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.437e-28 Identity = 90/199 (45.23%), Postives = 114/199 (57.29%), Query Frame = 0
Query: 49 SSSHLLKPESGEILNFGESKRSGNGN----LFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSGWGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRER 243
SSS L+KP SGEILNFG+ + +GN ++G + F ENK++ S NE+ +L F AG+SDHSDLEASVVKE V EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L RA++ P V ++ + GD INEL++ K +S L I+ +
Sbjct: 354 SSSTLVKPRSGEILNFGDEGKRSSGNPDPSSYSGQTQF--ENKRK--RSMVLNEDKVLSFGDK-TAGESDHSDLEASVVKE------VAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQR------FYAL--------RAVV------------PNVSKMDKASLLGDAIAY-INELKSKVVKTESEKLQIKNQ 514
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC4_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana OX=3702 GN=MYC4 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.106e-27 Identity = 72/103 (69.90%), Postives = 79/103 (76.70%), Query Frame = 0
Query: 86 NKKRSPNSRGSNEEAMLLFTSGWGAGDSDHSDLEASVVKEADSSRVV-EPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMS 186
NKKRSP S +NEE ML FTS DS+HSDLEASV KEA+S+RVV EPEK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L AVV +S
Sbjct: 350 NKKRSPVS--NNEEGMLSFTSVLPC-DSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYSLRAVVPNVS 443
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC2_ORYSJ (Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.220e-27 Identity = 105/267 (39.33%), Postives = 137/267 (51.31%), Query Frame = 0
Query: 33 RRFIFFDESSSVRNGNSSSHLLKPESGEILNFGESKRSGN------------------GNLFTGNSPFAV--------ENKKRS--PNSRGSNE---------EAMLLFTS--------GWGA---GDSDHSDLEASVVKEADSSRVVEP----EKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRERKPP 246
RR + F + +S G ++ KPE+GEILNFG SG G+LF+ ++P N+KRS SR SN E ML F+S G GA +SDHSDLEASV +E +SSRVV P EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L AVV +S + A+ + +I E + G L L ++ + L+++M+ SL R+ +PP
Sbjct: 353 RRELNFSDFAS-NGGAAAPPFFKPETGEILNFGNDSSSGRRNPSPAPPAATASLTTAPGSLFSQHTPTLTAAANDAKSNNQKRSMEATSRASNTNNHPAATANEGMLSFSSAPTTRPSTGTGAPAKSESDHSDLEASV-REVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYALRAVVPNVS-------KMDKASLLGDAISYINE---LRGKLTALETDK-ETLQSQME-SLKKERDARPP 599
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MYC3_ARATH (Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.564e-25 Identity = 85/162 (52.47%), Postives = 98/162 (60.49%), Query Frame = 0
Query: 31 HQRRFIFFDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNL-FTGNSPFAVENKKRSPNSRGSN-EEAMLLFTS--GWGAGDSDHSDLEASVVKEADSSRVVEP-EKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMS 186
HQ + ++ SSV N N S L + L F N L F GN +KKR+ S+GSN +E ML F++ A DSDHSDLEASVVKEA VVEP EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L AVV +S
Sbjct: 297 HQISKLEKNDISSVENQNRQSSCLVEKD---LTFQGGLLKSNETLSFCGNES----SKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKEA---IVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYSLRAVVPNVS 442
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP5 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.425e-17 Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 0
Query: 287 NMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQ 328
+MGAFLLSAGTK K+YSLPNSR+MIHQPLGGA+GGQTDIDIQ
Sbjct: 193 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQ 234
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: MTB1_SOLLC (Transcription factor MTB1 OS=Solanum lycopersicum OX=4081 GN=MTB1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.609e-14 Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 112 DSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
+S+HSD+EAS + D + V+ EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ + +
Sbjct: 395 ESEHSDVEASC--KEDRAGPVD-EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 453
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: CLPP_WOLSU (ATP-dependent Clp protease proteolytic subunit OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.196e-14 Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 0
Query: 287 NMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQ 328
+MGAFLLS GTK K++SLPNSR+MIHQPLGGA+G TDI+IQ
Sbjct: 98 SMGAFLLSCGTKGKRFSLPNSRIMIHQPLGGAQGQATDIEIQ 139
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Match: CLPP_ARCB4 (ATP-dependent Clp protease proteolytic subunit OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=clpP PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 9.878e-14 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 287 NMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQ 328
+MGAFLLS+G K K+YSLPNSR+MIHQPLGGA G TDI IQ
Sbjct: 98 SMGAFLLSSGAKGKRYSLPNSRIMIHQPLGGARGQATDIQIQ 139
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|5901 (AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein | Chr1:11799042-11800913 REVERSE LENGTH=623 | 201606) HSP 1 Score: 118.627 bits (296), Expect = 2.493e-29 Identity = 90/199 (45.23%), Postives = 114/199 (57.29%), Query Frame = 0
Query: 49 SSSHLLKPESGEILNFGESKRSGNGN----LFTGNSPFAVENKKRSPNSRGSNEEAMLLFTSGWGAGDSDHSDLEASVVKEADSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKLAVVEGMSMRALIAYRFIFATACITPLVFIFERQRMGGDLNELNINELQALEAKMDSSLLAIRER 243
SSS L+KP SGEILNFG+ + +GN ++G + F ENK++ S NE+ +L F AG+SDHSDLEASVVKE V EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L RA++ P V ++ + GD INEL++ K +S L I+ +
Sbjct: 354 SSSTLVKPRSGEILNFGDEGKRSSGNPDPSSYSGQTQF--ENKRK--RSMVLNEDKVLSFGDK-TAGESDHSDLEASVVKE------VAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQR------FYAL--------RAVV------------PNVSKMDKASLLGDAIAY-INELKSKVVKTESEKLQIKNQ 514
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|32775 (AT4G17880.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein | Chr4:9933702-9935471 REVERSE LENGTH=589 | 201606) HSP 1 Score: 116.701 bits (291), Expect = 1.131e-28 Identity = 72/103 (69.90%), Postives = 79/103 (76.70%), Query Frame = 0
Query: 86 NKKRSPNSRGSNEEAMLLFTSGWGAGDSDHSDLEASVVKEADSSRVV-EPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMS 186
NKKRSP S +NEE ML FTS DS+HSDLEASV KEA+S+RVV EPEK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L AVV +S
Sbjct: 350 NKKRSPVS--NNEEGMLSFTSVLPC-DSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYSLRAVVPNVS 443
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|44175 (AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein | Chr5:18974231-18976009 FORWARD LENGTH=592 | 201606) HSP 1 Score: 109.768 bits (273), Expect = 2.623e-26 Identity = 85/162 (52.47%), Postives = 98/162 (60.49%), Query Frame = 0
Query: 31 HQRRFIFFDESSSVRNGNSSSHLLKPESGEILNFGESKRSGNGNL-FTGNSPFAVENKKRSPNSRGSN-EEAMLLFTS--GWGAGDSDHSDLEASVVKEADSSRVVEP-EKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMS 186
HQ + ++ SSV N N S L + L F N L F GN +KKR+ S+GSN +E ML F++ A DSDHSDLEASVVKEA VVEP EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L AVV +S
Sbjct: 297 HQISKLEKNDISSVENQNRQSSCLVEKD---LTFQGGLLKSNETLSFCGNES----SKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKEA---IVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYSLRAVVPNVS 442
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|323 (AT1G02560.1 | nuclear encoded CLP protease 5 | Chr1:538000-539805 FORWARD LENGTH=298 | 201606) HSP 1 Score: 83.5741 bits (205), Expect = 4.527e-18 Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 0
Query: 287 NMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQ 328
+MGAFLLSAGTK K+YSLPNSR+MIHQPLGGA+GGQTDIDIQ
Sbjct: 193 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQ 234
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|19924 (AT2G46510.1 | ABA-inducible BHLH-type transcription factor | Chr2:19091187-19092887 REVERSE LENGTH=566 | 201606) HSP 1 Score: 70.8626 bits (172), Expect = 2.886e-13 Identity = 46/89 (51.69%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 132 VEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGVIVFYKL-AVVEGMSM--RALIAYRFIFATACITPLVFIFERQRMGGD 217
V EK P+K GRKPANGREEPLNHVEAERQRREKLNQ+ FY L +VV +S +A + I + V I E +R+G D
Sbjct: 373 VVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQR------FYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTD 455
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|32432 (AT4G16430.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr4:9267599-9269002 FORWARD LENGTH=467 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 8.849e-12 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query: 127 DSSRVVEPEKWPQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
D + + E+ P+K GRKPANGREE LNHVEAERQRREKLNQ+ + +
Sbjct: 293 DETLYLTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYAL 339
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|10006 (AT1G66670.1 | CLP protease proteolytic subunit 3 | Chr1:24863995-24865646 REVERSE LENGTH=309 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 4.121e-10 Identity = 25/43 (58.14%), Postives = 36/43 (83.72%), Query Frame = 0
Query: 287 NMGAFLLSAGTKAKQYSLPNSRVMIHQPLGGAEGGQTDIDIQL 329
+MGAFLL++G+K K+Y +PNS+VMIHQPLG A G T++ I++
Sbjct: 164 SMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRI 206
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|70 (AT1G01260.3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:109595-111367 FORWARD LENGTH=590 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 8.057e-10 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 138 PQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
P+K GR+PANGR E LNHVEAERQRREKLNQ+ + +
Sbjct: 417 PRKRGRRPANGRAEALNHVEAERQRREKLNQRFYAL 452
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|69 (AT1G01260.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:109595-111367 FORWARD LENGTH=590 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 8.057e-10 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 138 PQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
P+K GR+PANGR E LNHVEAERQRREKLNQ+ + +
Sbjct: 417 PRKRGRRPANGRAEALNHVEAERQRREKLNQRFYAL 452
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Match: gnl|BL_ORD_ID|68 (AT1G01260.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:109595-111367 FORWARD LENGTH=590 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 8.057e-10 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 138 PQKWGRKPANGREEPLNHVEAERQRREKLNQKLFGV 173
P+K GR+PANGR E LNHVEAERQRREKLNQ+ + +
Sbjct: 417 PRKRGRRPANGRAEALNHVEAERQRREKLNQRFYAL 452 The following BLAST results are available for this feature:
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. NCBI nr
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs NCBI nr) Total hits: 10
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt TrEMBL) Total hits: 10
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. ExPASy Swiss-Prot
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt Swissprot) Total hits: 10
BLAST of maker-Dt_04-snap-gene-40.36-mRNA-1 vs. Araport11
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins
Date Performed: 2022-08-09
Sequences
The
following sequences are available for this feature:
mRNA sequence >maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_04-snap-gene-40.36-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=993bpback to top protein sequence of maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1 >maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1; organism=Gossypium hirsutum; type=polypeptide; length=330bpback to top mRNA from alignment at Dt04:40458052..40461243- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_04-snap-gene-40.36-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=3192bp; location=Sequence derived from: Dt04:40458052..40461243- (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at Dt04:40458052..40461243- >maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_04-snap-gene-40.36-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_04-snap-gene-40.36-mRNA-1; organism=Gossypium hirsutum; type=CDS; length=993bp; location=Sequence derived from: Dt04:40458052..40461243- (Gossypium hirsutumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|