rna-gnl|WGS:JABEZY|Gogos_00008905-RA
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: PREDICTED: (multiprotein-bridging factor 1b-like [Gossypium raimondii] >gi|1028943660|ref|XP_016715087.1| PREDICTED: multiprotein-bridging factor 1b-like [Gossypium hirsutum] >gi|763759668|gb|KJB26999.1| hypothetical protein B456_004G271900 [Gossypium raimondii] >gi|1344107845|gb|PPD81642.1| hypothetical protein GOBAR_DD21445 [Gossypium barbadense]) HSP 1 Score: 283.108 bits (723), Expect = 1.668e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: multiprotein (bridging factor 1 transcriptional coactivator [Gossypium hirsutum] >gi|1347688037|gb|PPR89751.1| hypothetical protein GOBAR_AA30927 [Gossypium barbadense]) HSP 1 Score: 281.952 bits (720), Expect = 5.108e-96 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: PREDICTED: (multiprotein-bridging factor 1b-like [Gossypium arboreum] >gi|728846410|gb|KHG25853.1| Multiprotein-bridging factor 1b -like protein [Gossypium arboreum]) HSP 1 Score: 280.026 bits (715), Expect = 3.124e-95 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+E KLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMETKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: PREDICTED: (multiprotein-bridging factor 1b-like [Gossypium hirsutum]) HSP 1 Score: 279.256 bits (713), Expect = 6.590e-95 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAP AAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPPAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: PREDICTED: (multiprotein-bridging factor 1a-like [Gossypium raimondii] >gi|1050632668|ref|XP_017639281.1| PREDICTED: multiprotein-bridging factor 1a-like [Gossypium arboreum] >gi|395758613|gb|AFN70434.1| multiprotein bridging factor 1 transcriptional coactivator [Gossypium hirsutum] >gi|763745614|gb|KJB13053.1| hypothetical protein B456_002G054400 [Gossypium raimondii] >gi|1347703789|gb|PPS02561.1| hypothetical protein GOBAR_AA18112 [Gossypium barbadense]) HSP 1 Score: 270.011 bits (689), Expect = 3.292e-91 Identity = 133/142 (93.66%), Postives = 139/142 (97.89%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKK P AA KKDEKVVNAARRAGAEIESVKKSNAGTN+AASSST+LNTRKLDEETENLAH+RVPTELKKAIMHAR+EKKLTQ+QLAQ+INEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKPPNAATKKDEKVVNAARRAGAEIESVKKSNAGTNKAASSSTTLNTRKLDEETENLAHERVPTELKKAIMHARMEKKLTQSQLAQMINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: PREDICTED: (multiprotein-bridging factor 1a-like [Gossypium hirsutum] >gi|1029085736|ref|XP_016703079.1| PREDICTED: multiprotein-bridging factor 1a-like [Gossypium hirsutum]) HSP 1 Score: 267.7 bits (683), Expect = 2.452e-90 Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKK P AA KKDEKVVNAARRAGAEIESVKKSNAG N+AASSST+LNTRKLDEETENLAH+RVPTELKKAIMHAR+EKKLTQ+QLAQ+INEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKPPNAATKKDEKVVNAARRAGAEIESVKKSNAGANKAASSSTTLNTRKLDEETENLAHERVPTELKKAIMHARMEKKLTQSQLAQMINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: multiprotein-bridging (factor 1a-like [Durio zibethinus]) HSP 1 Score: 260.766 bits (665), Expect = 4.429e-87 Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKK P+AAAKKDEKVVNAARRAGAEIES+KKSNAGTN+AASSSTSLNTRKLDEET+NLAHDRVP ELKKAIM AR+EKKLTQAQLAQ+INEKPQIIQEYESGKAIPNQQII KLERALG KLR K
Sbjct: 39 MAGIGPLTQDWEPVVIRKKPPSAAAKKDEKVVNAARRAGAEIESIKKSNAGTNKAASSSTSLNTRKLDEETDNLAHDRVPPELKKAIMQARMEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQIISKLERALGTKLRRNK 180
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: multiprotein-bridging (factor 1b [Cajanus cajan] >gi|1012333658|gb|KYP45043.1| Multiprotein-bridging factor 1b [Cajanus cajan]) HSP 1 Score: 257.684 bits (657), Expect = 1.856e-86 Identity = 122/142 (85.92%), Postives = 139/142 (97.89%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
M+G+GPL+QDWEPVV+RKKAPTAAA+KDEK VNAARR+GAEI++VKK NAGTN+AASSSTSLNT++LD++TENLAHDRVPTELKKAIM AR++KKLTQAQLAQ+INEKPQ+IQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MSGVGPLSQDWEPVVLRKKAPTAAARKDEKAVNAARRSGAEIDTVKKFNAGTNKAASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: Multiprotein-bridging (factor 1b [Apostasia shenzhenica]) HSP 1 Score: 257.299 bits (656), Expect = 2.848e-86 Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAG+GP+TQDWEPVVIRKKAP +AAKKDEK VNAARR+GA+IE+VKKSNAGTN+AASSSTSLNTRKLDEETENL+HDRVP+ELKK IM AR++KKLTQAQLAQ INEKPQ+IQEYESGKAIPNQQIIGKLER LG KLRGKK
Sbjct: 1 MAGVGPITQDWEPVVIRKKAPNSAAKKDEKAVNAARRSGADIETVKKSNAGTNKAASSSTSLNTRKLDEETENLSHDRVPSELKKNIMQARLDKKLTQAQLAQFINEKPQVIQEYESGKAIPNQQIIGKLERVLGVKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: multiprotein-bridging (factor 1b [Vigna radiata var. radiata]) HSP 1 Score: 254.988 bits (650), Expect = 2.316e-85 Identity = 119/142 (83.80%), Postives = 139/142 (97.89%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
M+G+GPL+QDWEPVV+RKKAPT+AA+KDEK VNAARR+GA+I+++KK NAGTN++ASSSTSLNT++LD++TENLAHDRVPTELKKAIM AR++KKLTQ+QLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MSGVGPLSQDWEPVVLRKKAPTSAARKDEKAVNAARRSGADIDTIKKYNAGTNKSASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.036e-84 Identity = 118/142 (83.10%), Postives = 134/142 (94.37%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGP+TQDWEPVVIRK+AP AAAK+DEK VNAARR+GA+IE+V+K NAG+N+AASS TSLNT+KLD++TENL+HDRVPTELKKAIM AR EKKLTQ+QLA LINEKPQ+IQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct: 1 MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.704e-82 Identity = 115/142 (80.99%), Postives = 131/142 (92.25%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGP+TQDWEPVVIRKK AAAK+DEK VNAARR+GA+IE+V+K NAGTN+AASS TSLNT+ LD++TENL H+RVPTELKKAIM AR +KKLTQ+QLAQ+INEKPQ+IQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct: 1 MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.657e-43 Identity = 71/139 (51.08%), Postives = 100/139 (71.94%), Query Frame = 0
Query: 5 GPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTS--LNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
G +TQDWEPVV+ K + +D K VNAA R G +++VKK +AG+N+ S+ +NT+KL+EETE A DRV E++ I AR+EKK++QA LA+ INE+ Q++QEYE+GKA+PNQ ++ K+E+ LG KLRGK
Sbjct: 7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGK 145
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q6GPQ6|EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.972e-41 Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK PTAA K ++ + AA+R G E+E+ KK +AG N+ + + NT KLD ETE L HDRVP E+ K I R K +TQ LA INEKPQ+I +YE GKAIPN Q++GK+ER +G KLRGK
Sbjct: 5 DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLDRETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGKIERVIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|O60869|EDF1_HUMAN (Endothelial differentiation-related factor 1 OS=Homo sapiens OX=9606 GN=EDF1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.011e-40 Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK PTAA K ++ + AA+R G ++E+ KK AG N+ S + NT KLD ETE L HDRV E+ K I R K LTQ LA INEKPQ+I +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q3T0V7|EDF1_BOVIN (Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.011e-40 Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK PTAA K ++ + AA+R G ++E+ KK AG N+ S + NT KLD ETE L HDRV E+ K I R K LTQ LA INEKPQ+I +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q5ZMC0|EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.243e-40 Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK P+AA K ++ V AA+R G ++E+ KK AG N+ + NT KLD ETE L HDRVP E+ K I R K +TQ LA INEKPQ+I +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLDRETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMGKIERAIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|P69736|EDF1_RAT (Endothelial differentiation-related factor 1 OS=Rattus norvegicus OX=10116 GN=Edf1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.979e-40 Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK PTAA K ++ + AA+R G ++E+ KK AG N+ S + NT KLD ETE L HDRV E+ K I R K LTQ LA INEKPQ+I +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q9JMG1|EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.979e-40 Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 10 DWEPV-VIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V V+RKK PTAA K ++ + AA+R G ++E+ KK AG N+ S + NT KLD ETE L HDRV E+ K I R K LTQ LA INEKPQ+I +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: sp|Q6PBY3|EDF1_DANRE (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.823e-39 Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 10 DWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
DW+ V + +K +AA K ++ V AA+R G +E+ KK AG N+ + NT KLD ETE L+H RVP E+ K I R K LTQ LA INEKPQII EYE GKAIPN Q++GK+ERA+G KLRGK
Sbjct: 5 DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDRETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGKIERAIGLKLRGK 134
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: AT3G58680.1 (| multiprotein bridging factor 1B | Chr3:21707367-21708625 FORWARD LENGTH=142 | 201606) HSP 1 Score: 247.284 bits (630), Expect = 1.066e-85 Identity = 118/142 (83.10%), Postives = 134/142 (94.37%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGP+TQDWEPVVIRK+AP AAAK+DEK VNAARR+GA+IE+V+K NAG+N+AASS TSLNT+KLD++TENL+HDRVPTELKKAIM AR EKKLTQ+QLA LINEKPQ+IQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct: 1 MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: AT2G42680.1 (| multiprotein bridging factor 1A | Chr2:17774972-17776116 FORWARD LENGTH=142 | 201606) HSP 1 Score: 240.35 bits (612), Expect = 6.894e-83 Identity = 115/142 (80.99%), Postives = 131/142 (92.25%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGP+TQDWEPVVIRKK AAAK+DEK VNAARR+GA+IE+V+K NAGTN+AASS TSLNT+ LD++TENL H+RVPTELKKAIM AR +KKLTQ+QLAQ+INEKPQ+IQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct: 1 MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: AT3G24500.1 (| multiprotein bridging factor 1C | Chr3:8918755-8919201 FORWARD LENGTH=148 | 201606) HSP 1 Score: 142.51 bits (358), Expect = 3.761e-44 Identity = 71/139 (51.08%), Postives = 100/139 (71.94%), Query Frame = 0
Query: 5 GPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTS--LNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
G +TQDWEPVV+ K + +D K VNAA R G +++VKK +AG+N+ S+ +NT+KL+EETE A DRV E++ I AR+EKK++QA LA+ INE+ Q++QEYE+GKA+PNQ ++ K+E+ LG KLRGK
Sbjct: 7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGK 145
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: AT3G24500.2 (| multiprotein bridging factor 1C | Chr3:8918755-8919169 FORWARD LENGTH=97 | 201606) HSP 1 Score: 71.633 bits (174), Expect = 5.128e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
Query: 5 GPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSST--SLNTRKLDEETENLAHDRVPTELKKAIMHAR 91
G +TQDWEPVV+ K + +D K VNAA R G +++VKK +AG+N+ S+ +NT+KL+EETE A DRV E++ + R
Sbjct: 7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2U307|A0A5D2U307_GOSMU (HTH cro/C1-type domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D08G283900v1 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2BT03|A0A5D2BT03_GOSDA (HTH cro/C1-type domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G293200v1 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5J5QR88|A0A5J5QR88_GOSBA (HTH cro/C1-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D08G281100v1 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A0D2R513|A0A0D2R513_GOSRA (HTH cro/C1-type domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_004G271900 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A1U8LKH2|A0A1U8LKH2_GOSHI (multiprotein-bridging factor 1b-like OS=Gossypium hirsutum OX=3635 GN=LOC107928385 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2K1R0|A0A5D2K1R0_GOSTO (HTH cro/C1-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D08G292100v1 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.949e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2YER9|A0A5D2YER9_GOSMU (HTH cro/C1-type domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A08G261700v1 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.970e-96 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2FR55|A0A5D2FR55_GOSDA (HTH cro/C1-type domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A08G278900v1 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.970e-96 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|S4SF70|S4SF70_GOSHI (Multiprotein bridging factor 1 transcriptional coactivator OS=Gossypium hirsutum OX=3635 GN=MBF1a PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.970e-96 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Match: tr|A0A5D2PLC7|A0A5D2PLC7_GOSTO (HTH cro/C1-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A08G277300v1 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.970e-96 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARVEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHAR+EKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct: 1 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIESVKKSNAGTNRAASSSTSLNTRKLDEETENLAHDRVPTELKKAIMHARMEKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142 The following BLAST results are available for this feature:
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU_v1 Gossypium_gossypioides D6 proteins vs NCBI nr) Total hits: 10
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU_v1.0 Gossypium gossypioides D6 proteins vs UniProt Swissprot ) Total hits: 10
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU_v1 Gossypium gossypioides D6 proteins vs arabidopsis Araport11) Total hits: 4
BLAST of rna-gnl|WGS:JABEZY|Gogos_00008905-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU_v1 Gossypium_gossypioides D6 proteins vs UniProt TrEMBL ) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ISU_v1.0 Gossypium gossypioides D6 proteins
Date Performed: 2021-08-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-Gogos_00008905-RA_D6_ISU_v1 ID=rna-Gogos_00008905-RA_D6_ISU_v1; Name=rna-gnl|WGS:JABEZY|Gogos_00008905-RA; organism=Gossypium gossypioides; type=mRNA; length=429bpback to top protein sequence of rna-Gogos_00008905-RA_D6_ISU_v1 >rna-Gogos_00008905-RA_D6_ISU_v1 ID=rna-Gogos_00008905-RA_D6_ISU_v1; Name=rna-Gogos_00008905-RA_D6_ISU_v1; organism=Gossypium gossypioides; type=polypeptide; length=142bpback to top mRNA from alignment at Chr04:35388700..35390146- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-Gogos_00008905-RA_D6_ISU_v1 ID=rna-Gogos_00008905-RA_D6_ISU_v1; Name=rna-gnl|WGS:JABEZY|Gogos_00008905-RA; organism=Gossypium gossypioides; type=mRNA; length=1447bp; location=Sequence derived from: Chr04:35388700..35390146- (Gossypium gossypioidesback to top Coding sequence (CDS) from alignment at Chr04:35388700..35390146- >rna-Gogos_00008905-RA_D6_ISU_v1 ID=rna-Gogos_00008905-RA_D6_ISU_v1; Name=rna-gnl|WGS:JABEZY|Gogos_00008905-RA; organism=Gossypium gossypioides; type=CDS; length=429bp; location=Sequence derived from: Chr04:35388700..35390146- (Gossypium gossypioidesback to top |