Ghe08G01110, Ghe08G01110_WHU-A1_v1 (mRNA) Gossypium herbaceum

Transcript Overview
NameGhe08G01110
Unique NameGhe08G01110_WHU-A1_v1
TypemRNA
OrganismGossypium herbaceum (Cotton (G. herbaceum))
Sequence length261
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr08chromosomeChr08:787501..787761 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
adhwL1517Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhwL1631Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhwL1765Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhwL2858Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhwL2971Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
abhwL0235Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
adhwL3098Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
achwL0761Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
abhwL1891Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
abhwL2112Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
achwL1513Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
achwL1623Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
achwL1768Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
awhwL1305Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awhwL1415Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awhwL1553Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
bhhwL2095Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bzhwL1219Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhwL1512Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bhhwL3818Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bzhwL1632Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhwL1767Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhwL2847Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhwL2969Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhwL3101Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
dthwL0065Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dthwL0161Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dthwL0965Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dthwL1060Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dthwL1320Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
gbhwL0651Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gdhwL0658Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gbhwL1502Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhwL1624Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhwL1759Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gdhwL1523Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhwL1641Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhwL1778Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hnhwL0626Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhwL0625Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gdhwL2344Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gbhwL2822Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghthwL0642Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
hnhwL1234Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghzhwL0624Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gbhwL2941Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhwL3070Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gdhwL2876Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hnhwL1531Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
gdhwL2989Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hnhwL1657Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
gdhwL3120Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hnhwL1794Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhwL1568Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghthwL1222Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghhwL1701Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghzhwL1456Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthwL1510Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghzhwL1568Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthwL1623Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghzhwL1699Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hnhwL2346Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthwL1757Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghhwL2229Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
hnhwL3015Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hnhwL3135Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhwL2862Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
hnhwL3269Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhwL2984Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghzhwL2788Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhwL2896Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhwL3026Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthwL2946Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghthwL3084Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
hbhwL0149Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hwhwL729Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwhwL772Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwhwR806Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hbhwL1324Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hgshwL0652Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbhwL1937Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhwL1940Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjhwL0629Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhwL2552Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhwL2692Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhwL3183Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hgshwL1541Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjhwL1182Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshwL1658Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshwL1792Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjhwL1466Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjhwL1596Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjhwL1735Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hwhzR1734Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hwhzR1758Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hwhzR1829Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hwhzR1849Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hjhwL2269Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshwL2886Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshwL3002Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshwL3133Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjhwL2630Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjhwL2840Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjhwL2949Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjhwL3084Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hwrbR1851Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hwrbR1854Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hwrbR1929Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hwrbR1975Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hwrbR1998Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hwrjR1063Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hwrjR1083Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hwrjR1136Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hwtoR1441Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hwtoR1461Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hwtoR1510Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hwtoR1525Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hwtwR1723Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1736Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1757Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1809Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1816Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1825Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwtwR1843Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hwuhR1447Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hwuhR1517Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hwuhR1530Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dtthwL0053Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtthwL0281Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtthwL0461Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtthwL0816Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dfihwL0064Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfihwL0417Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfihwL0947Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfihwL1117Gossypium aridum (D4) genome ISU_v1Gossypium aridum
gtihwL0560Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gtihwL0892Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gtihwL1132Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
dqihwL0073Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqihwL0387Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqihwL0528Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqihwL1082Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
grohwL0768Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
grohwL0770Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
grohwL1517Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
grohwL1643Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
goshwL0665Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
goshwL1117Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
goshwL1352Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
goshwL1463Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
goshwL1598Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
grhhwL0659Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grhhwL1132Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grhhwL1349Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grhhwL1468Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grhhwL1604Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
ganhwL0634Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
ganhwL1066Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
ganhwL1263Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
ganhwL1368Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
ganhwL1486Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
gahhwL0645Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
gahhwL1080Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
gahhwL1293Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
gahhwL1418Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
gahhwL1539Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
hwndmR1750Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hwndmR1775Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hwndmR1848Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hwndmR1869Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hwpimR1773Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hwpimR1798Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hwpimR1875Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hwpimR1895Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
gdihwL0064Gossypium davidsonii (D3d-27) genome ISU_v1Gossypium davidsonii
gdihwL0581Gossypium davidsonii (D3d-27) genome ISU_v1Gossypium davidsonii
gdihwL0744Gossypium davidsonii (D3d-27) genome ISU_v1Gossypium davidsonii
gdihwL1120Gossypium davidsonii (D3d-27) genome ISU_v1Gossypium davidsonii
d3dhwL0097Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
d3dhwL0560Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
d3dhwL0896Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
barhwL0616Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL1182Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL1481Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL1580Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL1715Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL2233Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL2858Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhwL2977Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbhwL0614Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL1165Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL1450Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL1552Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL1687Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL2523Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL2803Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhwL2925Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
a3hhwL0630Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL1204Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL1501Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL1620Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL1753Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL2294Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL2869Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL2997Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hhwL3127Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
b1jhwL0676Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
b1jhwL1352Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
b1jhwL1475Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
b1jhwL1616Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
aouhwL0592Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
aouhwL0990Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
aouhwL1167Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
aouhwL1266Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
aouhwL1382Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
gbihwL0862Gossypium bickii (G1) genome JZU_v1Gossypium bickii
gbihwL1564Gossypium bickii (G1) genome JZU_v1Gossypium bickii
gbihwL1694Gossypium bickii (G1) genome JZU_v1Gossypium bickii
gbihwL1846Gossypium bickii (G1) genome JZU_v1Gossypium bickii
gszhwL0107Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gszhwL0575Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gszhwL0898Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gszhwL1132Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gechwL1509Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gechwL1632Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gechwL1776Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gechwL2877Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gechwL2998Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gechwL3134Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
grzhwL0959Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
grzhwL1163Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
grzhwL1269Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
grzhwL1401Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
adshwL0623Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL1191Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL1480Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL1596Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL1735Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL2276Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL2814Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL2922Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adshwL3058Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
hwjmbR1766Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hwjmbR1772Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hwjmbR1796Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hwjmbR1856Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hwjmbR1871Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hwjmbR1892Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
a1zhwL0614Gossypium herbaceum (A1) 'ZhongCao1' genome HAU_v1Gossypium herbaceum
a1zhwL1245Gossypium herbaceum (A1) 'ZhongCao1' genome HAU_v1Gossypium herbaceum
a1zhwL1356Gossypium herbaceum (A1) 'ZhongCao1' genome HAU_v1Gossypium herbaceum
a1zhwL1458Gossypium herbaceum (A1) 'ZhongCao1' genome HAU_v1Gossypium herbaceum
a1whwL0610Gossypium herbaceum (A1) 'A1a wild' genome HAU_v1Gossypium herbaceum
a1whwL1235Gossypium herbaceum (A1) 'A1a wild' genome HAU_v1Gossypium herbaceum
a1whwL1330Gossypium herbaceum (A1) 'A1a wild' genome HAU_v1Gossypium herbaceum
a1whwL1448Gossypium herbaceum (A1) 'A1a wild' genome HAU_v1Gossypium herbaceum
b1hhwL0684Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
b1hhwL1150Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
b1hhwL1373Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
b1hhwL1482Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
b1hhwL1625Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
c1hhwL0738Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hhwL0747Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hhwL1369Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hhwL1509Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
c1hhwL1627Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
e1hhwL0676Gossypium stocksii (E1) genome HAU_v1Gossypium stocksii
e1hhwL1385Gossypium stocksii (E1) genome HAU_v1Gossypium stocksii
e1hhwL1526Gossypium stocksii (E1) genome HAU_v1Gossypium stocksii
e1hhwL1650Gossypium stocksii (E1) genome HAU_v1Gossypium stocksii
f1hhwL0654Gossypium longicalyx (F1) genome HAU_v1Gossypium longicalyx
f1hhwL1240Gossypium longicalyx (F1) genome HAU_v1Gossypium longicalyx
f1hhwL1373Gossypium longicalyx (F1) genome HAU_v1Gossypium longicalyx
f1hhwL1611Gossypium longicalyx (F1) genome HAU_v1Gossypium longicalyx
g1hhwL0761Gossypium bickii (G1) genome HAU_v1Gossypium bickii
g1hhwL0770Gossypium bickii (G1) genome HAU_v1Gossypium bickii
g1hhwL1433Gossypium bickii (G1) genome HAU_v1Gossypium bickii
g1hhwL1557Gossypium bickii (G1) genome HAU_v1Gossypium bickii
g1hhwL1697Gossypium bickii (G1) genome HAU_v1Gossypium bickii
dtchwL0292Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
dtchwL0415Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
dtchwL0557Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
dkchwL0310Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
dkchwL0434Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
dkchwL0574Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
dkchwL1039Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
dkchwL1636Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
d6chwL0300Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
d6chwL0423Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
d6chwL0558Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
d6chwL0997Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
d6chwL1557Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
d8chwL0312Gossypium trilobum (D8) genome CRI_v1Gossypium trilobum
d8chwL0431Gossypium trilobum (D8) genome CRI_v1Gossypium trilobum
hwpscR1700Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1710Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1721Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1745Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1800Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1815Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscR1838Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyhwL0640Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL1240Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL1530Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL1667Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL1814Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL2373Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL2712Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL2923Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL3048Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhwL3189Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
ghchwL0648Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL1523Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL1639Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL1778Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL2882Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL2998Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghchwL3138Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
ghuhwL0648Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL1515Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL1635Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL1768Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL2885Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL3005Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghuhwL3140Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghahwL0645Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL1514Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL1635Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL1767Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL2867Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL2981Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghahwL3120Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
hwt2tR1457Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
hwt2tR1466Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
hwt2tR1483Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
hwt2tR1512Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
hwtmhR566Gossypium hirsutum (AD1) 'TM-1' genome HAU_v2.0Gossypium hirsutum
d3hhwL0644Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
d3hhwL1580Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
d3hhwL1707Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
d3hhwL2910Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
d3hhwL3034Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
atthwL0661Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL1529Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL1646Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL1780Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL2863Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL2970Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
atthwL3100Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0Gossypium hirsutum
aduhwL0653Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL1544Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL1657Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL1792Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL2899Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL3011Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aduhwL3146Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
aemhwL1397Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL1522Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL1639Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL2158Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL2739Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL2840Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
aemhwL2983Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
azmhwL0650Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL1528Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL1658Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL1800Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL2345Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL2918Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
azmhwL3035Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Gklo_8G000111.mRNA1Gossypium klotzschianum (D3-k) genome CRI_v1Gossypium klotzschianum
GhCSX8308.D08G012000.1Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
GH_A08G0106Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
rna-gnl|WGS_VKGI|Godar.A08G011700.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
GbM_D08G0131.1Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
Gano_08G001070.1Gossypium anomalum (B1) genome HAU_v1Gossypium anomalum
GB_A08G0100Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gstu08G031480.1Gossypium sturtianum (C1) genome HAU_v1Gossypium sturtianum
GH_A09G1150Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Ghicr24_A08G006600.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gorai.009G083300.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
Ghir_D08G42431.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v2.0Gossypium hirsutum
Gohir.A08G006901.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GB_D08G0100Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
GhM_D08G0111.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Cotton_A_11941Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
augustus_masked-At_08_GB713-gene-0.301-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GH_D09G1105Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GhUGA230.A08G012400.1Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
Ghir_D08G001150.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
rna-gnl|WGS:JAIQCV|GS04G_01120Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
Gohir.D08G017033.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
GbM_D09G1266.1Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
Gorai.004G011400.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS_VKGE|Gotom.D08G011500.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
GekA0801T281900.1Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
rna-gnl|WGS:JABFAD|Gohar_00015715-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
GR08G0140.t1Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
EVM_prediction_Ga08G0121Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Cotton_D_gene_10032042Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gbar_D08G41761.1Gossypium barbadense (AD2) '3-79' genome HAU_v3.0Gossypium barbadense
Gsto_08G029940.1Gossypium stocksii (E1) genome HAU_v1Gossypium stocksii
aug_m-At_08-proG-124.558-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Cotton_D_gene_10013925Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gh_A08G010900.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Gh_D08G0108Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Ghar_8G000113.mRNA1Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
Ghicr24_D08G009600.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
GhM_A09G1285.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gohir.A08G006901.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1Gossypium hirsutum
gene-E1A91_A08G011300v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gtri_8G000112.mRNA1Gossypium trilobum (D8) genome CRI_v1Gossypium trilobum
Ghi_A07G06316Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Glon_08G031160.1Gossypium longicalyx (F1) genome HAU_v1Gossypium longicalyx
Gbscaffold22070.1.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
D08G01190.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gm0628210.1Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
GhCSX8308.A08G011900.1Gossypium hirsutum (AD1) 'CSX8308' genome HGS_v1.1Gossypium hirsutum
Ghi_A08G00516Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GhirPD0901T102300.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GbM_A08G0126.1Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
GR09G1896.t1Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
rna-gnl|WGS:VKDL|Gobar.D08G011000.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
GhUA48.D08G012100.1Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
Ghi_A09G06081Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
augustus_masked-Dt_08_GB713-gene-0.57-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gbi08G0093.1Gossypium bickii (G1) genome JZU_v1Gossypium bickii
GhM_A08G0123.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
XM_012617420.2Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
Gorai.006G113900.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
Cotton_D_gene_10015786Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
GhirPA0901T102100.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gbar_D08G001060.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
GhUA48.A08G012700.1Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
A08G01310.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Ggos_8G000114.mRNA1Gossypium gossypioides (D6) genome CRI_v1Gossypium gossypioides
rna-gnl|WGS:JABFAA|Goari_00008754-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
GhirA08G000840.1Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
CotAD_19120Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Garb_08G032350.1Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
Gohir.D08G017033.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Ghir_A08_G00114.t1Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
EVM0008821.1Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
Goano.008G010600-1Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
aug_masked-Dt_08-g-4.1102-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Gothu.00008982-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
Ghi_D09G05676Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Grai_08G001100.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
Gohir.A09G097500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
EVM0013227.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS_VKGI|Godar.D08G011700.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
GstA0801T010000.1Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
evm.model.Goano08G0118Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
GR05G0862.t1Gossypium raimondii (D5) 'D5-3' Telomere-to-Telomere genome PKU_v1.0Gossypium raimondii
gene-E1A91_D08G011100v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS:JABEZX|Golob_00008670-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
Gohir.A08G006900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
aug_m-Dt_08-proG-4.1102-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GhirPA0801T009600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhM_D09G1219.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GhirD08G001110.1Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0Gossypium hirsutum
Grot_08G029310.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
CotAD_30287Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GhUGA230.D08G012300.1Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
GH_D08G0109Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GbM_A09G1300.1Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
Ghir_D08_G00127.t1Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0Gossypium hirsutum
rna-gnl|WGS_VKGE|Gotom.A09G117900.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
aug_masked-At_08-g-124.558-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GhirPD0801T267800.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gar08G01180Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
Gbic_08G001080.1Gossypium bickii (G1) genome HAU_v1Gossypium bickii
mk-Dt_09_Mikado_15.242-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Gosto.008G009100-1Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
mk-At_09_Mikado_20.793-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
rna-gnl|WGS:JABFAC|Godav_00010020-RAGossypium davidsonii (D3d-27) genome ISU_v1Gossypium davidsonii
rna-gnl|WGS_VKGE|Gotom.D09G119800.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Gher_08G001160.1Gossypium herbaceum (A1) 'ZhongCao1' genome HAU_v1Gossypium herbaceum
Ghe05G08620Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
A1.A1_08G009800-1Gossypium herbaceum (A1) 'Wagad' genome USDA_v1Gossypium herbaceum
Gheraf_08G025830.1Gossypium herbaceum (A1) 'A1a wild' genome HAU_v1Gossypium herbaceum
Ghe09G14060Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Ghe07G13350Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ghe08G01110.geneGhe08G01110.gene_WHU-A1_v1Gossypium herbaceumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghe08G01110.CDS1Ghe08G01110.CDS1_WHU-A1_v1Gossypium herbaceumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ghe08G01110Ghe08G01110_WHU-A1_v1-proteinGossypium herbaceumpolypeptide
Ghe08G01110_WHU-A1_v1Ghe08G01110_WHU-A1_v1Gossypium herbaceumpolypeptide


Homology
BLAST of Ghe08G01110 vs. Araport11
Match: gnl|BL_ORD_ID|22293 (AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3667337-3667690 FORWARD LENGTH=117 | 201606)

HSP 1 Score: 73.559 bits (179), Expect = 2.028e-18
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   13 SCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDE 78
            SC+SSE   E+ E              +TSM+LVGCPRCL+YVMLS  +PKCP+CKSTVLLDFL E
Sbjct:   43 SCVSSETNQEENET-------------ITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95          
BLAST of Ghe08G01110 vs. Araport11
Match: gnl|BL_ORD_ID|38140 (AT5G06270.2 | hypothetical protein | Chr5:1912895-1913263 FORWARD LENGTH=122 | 201606)

HSP 1 Score: 73.559 bits (179), Expect = 2.175e-18
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   24 EEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDE 78
            E  ++E  V      E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL E
Sbjct:   47 EMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101          
BLAST of Ghe08G01110 vs. Araport11
Match: gnl|BL_ORD_ID|38139 (AT5G06270.1 | hypothetical protein | Chr5:1912895-1913263 FORWARD LENGTH=122 | 201606)

HSP 1 Score: 73.559 bits (179), Expect = 2.175e-18
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   24 EEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDE 78
            E  ++E  V      E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL E
Sbjct:   47 EMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101          
BLAST of Ghe08G01110 vs. Araport11
Match: gnl|BL_ORD_ID|40897 (AT5G22270.1 | hypothetical protein | Chr5:7372487-7372768 REVERSE LENGTH=93 | 201606)

HSP 1 Score: 50.8322 bits (120), Expect = 8.963e-10
Identity = 21/45 (46.67%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   42 SMLLVGCPRCLIYVMLS-KFEPKCPQCKSTVLLDFLDEETAKWAS 85
            SM++VGCP C++Y++ S + +P+CP+C S VLLDFL    +K ++
Sbjct:   48 SMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKST 92          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|823145983|ref|XP_012472874.1| (PREDICTED: uncharacterized protein LOC105790034 [Gossypium raimondii] >gi|763754407|gb|KJB21738.1| hypothetical protein B456_004G011400 [Gossypium raimondii])

HSP 1 Score: 147.132 bits (370), Expect = 2.203e-43
Identity = 75/86 (87.21%), Postives = 76/86 (88.37%), Query Frame = 0
Query:    1 MSVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            MSVSP EISPENSCLSSEPGDEKE     SVVTMR R EVT+MLLVGCPRCLIYVMLSK EPKCPQCKSTVLLDFLDEETAKWAS 
Sbjct:   77 MSVSPPEISPENSCLSSEPGDEKEAA---SVVTMRNRPEVTTMLLVGCPRCLIYVMLSKVEPKCPQCKSTVLLDFLDEETAKWAST 159          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1204894163|ref|XP_021278915.1| (LOW QUALITY PROTEIN: uncharacterized protein LOC110412649 [Herrania umbratica])

HSP 1 Score: 99.3673 bits (246), Expect = 3.549e-25
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA-EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+SPE+SC+SSEP D           +M+Y + E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE AK A N
Sbjct:   31 SVSSWEMSPESSCVSSEPDDS---------TSMQYSSPEATSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLSEENAKKARN 107          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|508786091|gb|EOY33347.1| (Gb:AAF02129.1, putative [Theobroma cacao])

HSP 1 Score: 98.9821 bits (245), Expect = 4.593e-25
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+SPE+SC+SSEP D           +M+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE AK A N
Sbjct:   31 SVSSWEMSPESSCVSSEPDDS---------TSMQYPSSPEATSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENAKKARN 108          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1269891697|ref|XP_022756667.1| (uncharacterized protein LOC111304381 [Durio zibethinus])

HSP 1 Score: 97.8265 bits (242), Expect = 1.107e-24
Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+SPE+SC+SSEP D            M+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE AK A N
Sbjct:   31 SVSSCEMSPESSCVSSEPDD----------TMMQYPSSPEATSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENAKKARN 107          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1029010391|ref|XP_016669040.1| (PREDICTED: uncharacterized protein LOC107889189 [Gossypium hirsutum] >gi|1050578429|ref|XP_017610272.1| PREDICTED: uncharacterized protein LOC108456185 [Gossypium arboreum] >gi|1347681764|gb|PPR85160.1| hypothetical protein GOBAR_AA35533 [Gossypium barbadense])

HSP 1 Score: 91.2781 bits (225), Expect = 4.745e-22
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP        + S  TM+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEP--------DNSTTTMQYPSSPEETSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1137215875|gb|OMO83191.1| (hypothetical protein COLO4_22643 [Corchorus olitorius])

HSP 1 Score: 90.5077 bits (223), Expect = 8.930e-22
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS   +SPE+SC+SSEP ++     EE           TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE AK + N
Sbjct:   32 SVSSWAMSPESSCVSSEPEEQYPSSPEE-----------TSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLSEENAKKSRN 105          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1098848759|ref|XP_018831243.1| (PREDICTED: uncharacterized protein LOC108998926 [Juglans regia])

HSP 1 Score: 89.7373 bits (221), Expect = 2.623e-21
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    7 EISPENSCLSSEPGDEKEEEEEESVVTMRY---RAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            EIS E SC+SSEP D+         +T++Y    AE  SM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE A+   N
Sbjct:   38 EISVEGSCVSSEPEDQP--------MTLQYSPSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEENARNTRN 112          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|568855872|ref|XP_006481519.1| (PREDICTED: uncharacterized protein LOC102628922 [Citrus sinensis] >gi|1315946421|dbj|GAY61220.1| hypothetical protein CUMW_208150 [Citrus unshiu])

HSP 1 Score: 89.3521 bits (220), Expect = 4.323e-21
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    8 ISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            +SPE+SC+SSEP     EE  ++   +      TSM+L GCPRCL+YVMLS   PKCP+CKSTVLLDFL+EE  K ASN
Sbjct:   54 VSPESSCVSSEP-----EEMTDAAAAIHV---TTSMVLAGCPRCLMYVMLSDANPKCPKCKSTVLLDFLNEENNKKASN 124          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1098848787|ref|XP_018831258.1| (PREDICTED: uncharacterized protein LOC108998943 [Juglans regia])

HSP 1 Score: 88.1965 bits (217), Expect = 8.626e-21
Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    7 EISPENSCLSSEPGDEKEEEEEESVVTMRY---RAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            E+S E SC+SSEP D+         +T++Y    AE  SM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE A+   N
Sbjct:   38 EMSVEGSCVSSEPEDQP--------MTLQYSPSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEENARNTRN 112          
BLAST of Ghe08G01110 vs. NCBI nr
Match: gi|1029015956|ref|XP_016671863.1| (PREDICTED: uncharacterized protein LOC107891539 [Gossypium hirsutum])

HSP 1 Score: 86.2705 bits (212), Expect = 4.660e-20
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMR--YRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP D        S  TM+     E TSM+LVGCPRCL+YVML + +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEPDD--------STTTMQCPSSPEETSMVLVGCPRCLMYVMLLEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A0D2P4Y6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G011400 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.851e-43
Identity = 75/86 (87.21%), Postives = 76/86 (88.37%), Query Frame = 0
Query:    1 MSVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            MSVSP EISPENSCLSSEPGDEKE     SVVTMR R EVT+MLLVGCPRCLIYVMLSK EPKCPQCKSTVLLDFLDEETAKWAS 
Sbjct:   77 MSVSPPEISPENSCLSSEPGDEKEAA---SVVTMRNRPEVTTMLLVGCPRCLIYVMLSKVEPKCPQCKSTVLLDFLDEETAKWAST 159          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A061GVZ4_THECC (Gb:AAF02129.1, putative OS=Theobroma cacao OX=3641 GN=TCM_041318 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.858e-25
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+SPE+SC+SSEP D           +M+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE AK A N
Sbjct:   31 SVSSWEMSPESSCVSSEPDDS---------TSMQYPSSPEATSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENAKKARN 108          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A2P5W242_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA35533 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.986e-22
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP        + S  TM+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEP--------DNSTTTMQYPSSPEETSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A1U8HSN3_GOSHI (uncharacterized protein LOC107889189 OS=Gossypium hirsutum OX=3635 GN=LOC107889189 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.986e-22
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRA--EVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP        + S  TM+Y +  E TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEP--------DNSTTTMQYPSSPEETSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A1R3IKZ3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22643 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.501e-22
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS   +SPE+SC+SSEP ++     EE           TSM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE AK + N
Sbjct:   32 SVSSWAMSPESSCVSSEPEEQYPSSPEE-----------TSMVLVGCPRCLMYVMLSEVDPKCPRCKSTVLLDFLSEENAKKSRN 105          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A2I4FHX4_JUGRE (uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.203e-21
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    7 EISPENSCLSSEPGDEKEEEEEESVVTMRY---RAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            EIS E SC+SSEP D+         +T++Y    AE  SM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE A+   N
Sbjct:   38 EISVEGSCVSSEPEDQP--------MTLQYSPSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEENARNTRN 112          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A2H5Q9A0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_208150 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.632e-21
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    8 ISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            +SPE+SC+SSEP     EE  ++   +      TSM+L GCPRCL+YVMLS   PKCP+CKSTVLLDFL+EE  K ASN
Sbjct:   54 VSPESSCVSSEP-----EEMTDAAAAIHV---TTSMVLAGCPRCLMYVMLSDANPKCPKCKSTVLLDFLNEENNKKASN 124          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A2I4FHZ1_JUGRE (uncharacterized protein LOC108998943 OS=Juglans regia OX=51240 GN=LOC108998943 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.246e-21
Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    7 EISPENSCLSSEPGDEKEEEEEESVVTMRY---RAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            E+S E SC+SSEP D+         +T++Y    AE  SM+LVGCPRCL+YVMLS+ +PKCP+CKSTVLLDFL EE A+   N
Sbjct:   38 EMSVEGSCVSSEPEDQP--------MTLQYSPSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEENARNTRN 112          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A1U8I6L9_GOSHI (uncharacterized protein LOC107891539 OS=Gossypium hirsutum OX=3635 GN=LOC107891539 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.915e-20
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMR--YRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP D        S  TM+     E TSM+LVGCPRCL+YVML + +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEPDD--------STTTMQCPSSPEETSMVLVGCPRCLMYVMLLEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Match: A0A0D2S135_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G113900 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.134e-20
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 SVSPLEISPENSCLSSEPGDEKEEEEEESVVTMR--YRAEVTSMLLVGCPRCLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN 86
            SVS  E+S E+SC+SSEP D        S  TM+     E TSM+LVGCPRCL+YVML + +PKCP+CKSTVLLDFL+EE  K   N
Sbjct:   35 SVSSWEMSLESSCVSSEPDD--------STTTMQCPSSPEETSMVLVGCPRCLMYVMLLEVDPKCPRCKSTVLLDFLNEENTKKTRN 113          
The following BLAST results are available for this feature:
BLAST of Ghe08G01110 vs. ExPASy Swiss-Prot
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ghe08G01110 vs. Araport11
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|222932.028e-1857.58AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3... [more]
gnl|BL_ORD_ID|381402.175e-1863.64AT5G06270.2 | hypothetical protein | Chr5:1912895-... [more]
gnl|BL_ORD_ID|381392.175e-1863.64AT5G06270.1 | hypothetical protein | Chr5:1912895-... [more]
gnl|BL_ORD_ID|408978.963e-1046.67AT5G22270.1 | hypothetical protein | Chr5:7372487-... [more]
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BLAST of Ghe08G01110 vs. NCBI nr
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|823145983|ref|XP_012472874.1|2.203e-4387.21PREDICTED: uncharacterized protein LOC105790034 [G... [more]
gi|1204894163|ref|XP_021278915.1|3.549e-2561.63LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
gi|508786091|gb|EOY33347.1|4.593e-2560.92Gb:AAF02129.1, putative [Theobroma cacao][more]
gi|1269891697|ref|XP_022756667.1|1.107e-2460.92uncharacterized protein LOC111304381 [Durio zibeth... [more]
gi|1029010391|ref|XP_016669040.1|4.745e-2258.62PREDICTED: uncharacterized protein LOC107889189 [G... [more]
gi|1137215875|gb|OMO83191.1|8.930e-2257.65hypothetical protein COLO4_22643 [Corchorus olitor... [more]
gi|1098848759|ref|XP_018831243.1|2.623e-2157.83PREDICTED: uncharacterized protein LOC108998926 [J... [more]
gi|568855872|ref|XP_006481519.1|4.323e-2158.23PREDICTED: uncharacterized protein LOC102628922 [C... [more]
gi|1098848787|ref|XP_018831258.1|8.626e-2156.63PREDICTED: uncharacterized protein LOC108998943 [J... [more]
gi|1029015956|ref|XP_016671863.1|4.660e-2057.47PREDICTED: uncharacterized protein LOC107891539 [G... [more]
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BLAST of Ghe08G01110 vs. ExPASy TrEMBL
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A0D2P4Y6_GOSRA1.851e-4387.21Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A061GVZ4_THECC3.858e-2560.92Gb:AAF02129.1, putative OS=Theobroma cacao OX=3641... [more]
A0A2P5W242_GOSBA3.986e-2258.62Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A1U8HSN3_GOSHI3.986e-2258.62uncharacterized protein LOC107889189 OS=Gossypium ... [more]
A0A1R3IKZ3_9ROSI7.501e-2257.65Uncharacterized protein OS=Corchorus olitorius OX=... [more]
A0A2I4FHX4_JUGRE2.203e-2157.83uncharacterized protein LOC108998926 OS=Juglans re... [more]
A0A2H5Q9A0_CITUN3.632e-2158.23Uncharacterized protein OS=Citrus unshiu OX=55188 ... [more]
A0A2I4FHZ1_JUGRE7.246e-2156.63uncharacterized protein LOC108998943 OS=Juglans re... [more]
A0A1U8I6L9_GOSHI3.915e-2057.47uncharacterized protein LOC107891539 OS=Gossypium ... [more]
A0A0D2S135_GOSRA4.134e-2057.47Uncharacterized protein OS=Gossypium raimondii OX=... [more]
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InterPro
Analysis Name: InterProScan WHU_v1_a1 Gossypium herbaceum proteins
Date Performed: 2020-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 2..81
NoneNo IPR availablePANTHERPTHR33177:SF26coord: 2..81

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ghe08G01110_WHU-A1_v1 ID=Ghe08G01110_WHU-A1_v1; Name=Ghe08G01110; organism=Gossypium herbaceum; type=mRNA; length=261bp
ATGTCAGTTTCTCCCCTGGAAATATCGCCAGAAAACTCATGCTTGTCTTC
GGAACCCGGAGATGAAAAGGAGGAGGAGGAGGAGGAGTCAGTGGTGACGA
TGCGGTACCGTGCTGAAGTAACGTCAATGCTGCTAGTGGGATGCCCTCGT
TGTCTCATATATGTTATGTTATCCAAATTTGAACCTAAATGCCCTCAATG
TAAGAGCACTGTCTTGCTTGATTTTCTTGATGAAGAGACTGCTAAATGGG
CAAGCAATTGA
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protein sequence of Ghe08G01110_WHU-A1_v1

>Ghe08G01110_WHU-A1_v1 ID=Ghe08G01110_WHU-A1_v1; Name=Ghe08G01110_WHU-A1_v1; organism=Gossypium herbaceum; type=polypeptide; length=86bp
MSVSPLEISPENSCLSSEPGDEKEEEEEESVVTMRYRAEVTSMLLVGCPR
CLIYVMLSKFEPKCPQCKSTVLLDFLDEETAKWASN
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mRNA from alignment at Chr08:787501..787761+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ghe08G01110_WHU-A1_v1 ID=Ghe08G01110_WHU-A1_v1; Name=Ghe08G01110; organism=Gossypium herbaceum; type=mRNA; length=261bp; location=Sequence derived from: Chr08:787501..787761+ (Gossypium herbaceum
ATGTCAGTTTCTCCCCTGGAAATATCGCCAGAAAACTCATGCTTGTCTTC GGAACCCGGAGATGAAAAGGAGGAGGAGGAGGAGGAGTCAGTGGTGACGA TGCGGTACCGTGCTGAAGTAACGTCAATGCTGCTAGTGGGATGCCCTCGT TGTCTCATATATGTTATGTTATCCAAATTTGAACCTAAATGCCCTCAATG TAAGAGCACTGTCTTGCTTGATTTTCTTGATGAAGAGACTGCTAAATGGG CAAGCAATTGA
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Coding sequence (CDS) from alignment at Chr08:787501..787761+

>Ghe08G01110_WHU-A1_v1 ID=Ghe08G01110_WHU-A1_v1; Name=Ghe08G01110; organism=Gossypium herbaceum; type=CDS; length=261bp; location=Sequence derived from: Chr08:787501..787761+ (Gossypium herbaceum
ATGTCAGTTTCTCCCCTGGAAATATCGCCAGAAAACTCATGCTTGTCTTC
GGAACCCGGAGATGAAAAGGAGGAGGAGGAGGAGGAGTCAGTGGTGACGA
TGCGGTACCGTGCTGAAGTAACGTCAATGCTGCTAGTGGGATGCCCTCGT
TGTCTCATATATGTTATGTTATCCAAATTTGAACCTAAATGCCCTCAATG
TAAGAGCACTGTCTTGCTTGATTTTCTTGATGAAGAGACTGCTAAATGGG
CAAGCAATTGA
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