Homology
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. NCBI nr
Match:
gi|763808043|gb|KJB74945.1| (hypothetical protein B456_012G015100 [Gossypium raimondii] >gi|763808044|gb|KJB74946.1| hypothetical protein B456_012G015100 [Gossypium raimondii])
HSP 1 Score: 143.28 bits (360), Expect = 2.242e-43
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH 70
MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH
Sbjct: 1 MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH 70
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. NCBI nr
Match:
gi|1142826914|gb|AQK85001.1| (hypothetical protein ZEAMMB73_Zm00001d037857 [Zea mays])
HSP 1 Score: 58.5362 bits (140), Expect = 7.682e-10
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 8 DEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHF 69
DE R K + ++ C V GS RGV RCLFV+CYP++QC GLD+CRH HHH ++F
Sbjct: 13 DEAA--RAKETRCLALACCPCYYVLGSVARGVARCLFVACYPVIQCCGLDECRH-HHHASNF 71
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A0D2VUA5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G015100 PE=4 SV=1)
HSP 1 Score: 143.28 bits (360), Expect = 1.883e-43
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH 70
MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH
Sbjct: 1 MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH 70
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A1D6M160_MAIZE (Uncharacterized protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d037857 PE=4 SV=1)
HSP 1 Score: 58.5362 bits (140), Expect = 6.453e-10
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 8 DEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHF 69
DE R K + ++ C V GS RGV RCLFV+CYP++QC GLD+CRH HHH ++F
Sbjct: 13 DEAA--RAKETRCLALACCPCYYVLGSVARGVARCLFVACYPVIQCCGLDECRH-HHHASNF 71
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
K3ZBG2_SETIT (Uncharacterized protein OS=Setaria italica OX=4555 GN=SETIT_3G286800v2 PE=4 SV=1)
HSP 1 Score: 56.9954 bits (136), Expect = 2.749e-9
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHH-THF 69
V GS +RG+GRCLFV+CYP++QC GLD+CRH H H +HF
Sbjct: 33 VLGSVVRGIGRCLFVACYPMIQCCGLDECRHHHTSHLSHF 72
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A1E5WMD4_9POAL (Uncharacterized protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000448 PE=4 SV=1)
HSP 1 Score: 56.6102 bits (135), Expect = 3.574e-9
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHH-THF 69
V GS +RG+GRCLFV+CYP++QC GLD+CRH H H +HF
Sbjct: 33 VLGSVVRGIGRCLFVACYPMIQCCGLDECRHHHTSHLSHF 72
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A2S3HD53_9POAL (Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_3G339900 PE=4 SV=1)
HSP 1 Score: 56.6102 bits (135), Expect = 4.031e-9
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHH-THF 69
V GS +RG+GRCLFV+CYP++QC GLD+CRH H H +HF
Sbjct: 33 VLGSVVRGIGRCLFVACYPMIQCCGLDECRHHHTSHLSHF 72
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
I1HPM9_BRADI (Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=BRADI_2g44250v3 PE=4 SV=1)
HSP 1 Score: 55.0694 bits (131), Expect = 1.635e-8
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0
Query: 27 YCVRVGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHF 69
Y V S +RG+GRCLFV+CYP++QC GLD+C RHHH+TH
Sbjct: 24 YPCYVFSSFIRGIGRCLFVACYPVIQCCGLDEC--RHHHNTHL 64
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
J3M601_ORYBR (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)
HSP 1 Score: 54.6842 bits (130), Expect = 2.372e-8
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHH-THF 69
V S +RG+GRCLFV+CYP +QC GLD+CRH H H +HF
Sbjct: 34 VLSSVIRGIGRCLFVACYPAIQCCGLDECRHHHTTHLSHF 73
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A0E0L108_ORYPU (Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1)
HSP 1 Score: 53.9138 bits (128), Expect = 4.932e-8
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHF 69
V S +RG+GRCLFV+CYP +QC GLD+CRH HH T F
Sbjct: 33 VLSSVIRGIGRCLFVACYPAIQCCGLDECRH-HHTTTQF 70
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
A0A2Z7BY24_9LAMI (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_16346 PE=4 SV=1)
HSP 1 Score: 53.1434 bits (126), Expect = 6.501e-8
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
Query: 33 GSALRGVGRCLFVSCYPLLQCFGLDDCRHRHHHHTHFH 70
S R +GRC+FV CYP+LQC GLDDCRH HHH HF+
Sbjct: 28 SSVFRVIGRCMFVVCYPVLQCCGLDDCRH--HHHNHFY 63
BLAST of gene-E1A91_A05G436300v1-mRNA1 vs. ExPASy TrEMBL
Match:
I1PUE8_ORYGL (Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1)
HSP 1 Score: 53.5286 bits (127), Expect = 7.677e-8
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 31 VGGSALRGVGRCLFVSCYPLLQCFGLDDCRHRH 63
V S +RG+GRCLFV+CYP +QC GLD+CRH H
Sbjct: 30 VLSSVIRGIGRCLFVACYPAIQCCGLDECRHHH 62
The following BLAST results are available for this feature:
Sequences
The
following sequences are available for this feature:
protein sequence of rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1
>rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1 ID=rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1; Name=rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1; organism=Gossypium mustelinum; type=polypeptide; length=70bp
MRGNDDMDEGGIQRRKSRKKGSIIKVYCVRVGGSALRGVGRCLFVSCYPL
LQCFGLDDCRHRHHHHTHFH
back to topmRNA from alignment at CM017640.1:111966591..111967381+
Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1 ID=rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1; Name=gene-E1A91_A05G436300v1-mRNA1; organism=Gossypium mustelinum; type=mRNA; length=791bp; location=Sequence derived from: CM017640.1:111966591..111967381+ (Gossypium mustelinum
GCCTACGCGTATCTATCGGCTAATCAAAATTTCCAAAATGTTTTCTTGGT
TTTCTTAATTCAGGAAAAAACCCATCAACGAATATTCTCTCATTCATTTC
TCTGTATATATTTTGATGAATTTTAATGCTACAAGGTAAGTTGTGGAAAC
CCTTTCTTTACATCTCTGGTATGCATGTTTTTTGGCCAGGTTTTAATGGT
GGGAATCAAGTGATCAGTCAATGCAGATGACAGAGAATCTAAAGCTGAGT
TCGTGTAGTTTGAGGTTCAAGTATTGCATCTACAATCAGTTGCCCCGTCT
CCAAAGTAAAGCTTCCTTTGTATAAAAAGTACAGAGTGGATAAACATGAG
GGGAAATGATGATATGGATGAAGGTGGGATTCAAAGAAGAAAGAGCAGAA
AAAAGGGCTCAATAATCAAAGTGTATTGTGTGAGAGTGGGTGGTTCAGCG
TTGAGAGGAGTTGGGAGATGCTTGTTTGTAAGTTGTTACCCACTCCTCCA
ATGTTTTGGGTTGGATGATTGTAGGCATCGCCACCATCATCACACCCATT
TCCATTGATCCCAAATTTCCCACAAAGGATAGGAGTAGGGGTTGTACAAA
TTTGAATCTGAGACCAGGATCATTGGAAACTTGAACATAAGCCTTTTACC
GGTCAATCCGTGATTCAGTATATCGTGTATCTTTTGAATTGTATGAAAGG
AAATAAAGCTTTAGATTTCCATTTTTTTTTTCAAGTTTTCATGCATTTAA
TGAGTCTTTGAATGATCATATTTTGATTCGGATATTCATCG
back to topCoding sequence (CDS) from alignment at CM017640.1:111966591..111967381+
>rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1 ID=rna-gnl-Gomus.A05G436300.1_JGI-AD4_v1.1; Name=gene-E1A91_A05G436300v1-mRNA1; organism=Gossypium mustelinum; type=CDS; length=213bp; location=Sequence derived from: CM017640.1:111966591..111967381+ (Gossypium mustelinum
ATGAGGGGAAATGATGATATGGATGAAGGTGGGATTCAAAGAAGAAAGAG
CAGAAAAAAGGGCTCAATAATCAAAGTGTATTGTGTGAGAGTGGGTGGTT
CAGCGTTGAGAGGAGTTGGGAGATGCTTGTTTGTAAGTTGTTACCCACTC
CTCCAATGTTTTGGGTTGGATGATTGTAGGCATCGCCACCATCATCACAC
CCATTTCCATTGA
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