Gh_A08G206300.1, Gh_A08G206300.1_CRI-TM1_v1 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1028940363|ref|XP_016713378.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS 274
MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS
Sbjct: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS 274
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1028937234|ref|XP_016711790.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 387.111 bits (993), Expect = 4.586e-134 Identity = 197/258 (76.36%), Postives = 203/258 (78.68%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
MTASAPTPTPMVSFPKLVADDE PLLA+GSLYRSIIGKLQ+LCITRPDLAY V+KLSQYMNAPREVHWRAVKR L YLSGTINH LFYSKSQFQLTCYS DWASSIEDR STTGYVVYL SNLVAWCSKKQAVVSRSTSEAE++SLAN VSE LWIKQ LEEVGVITCQTPV NYV DKQI DALTKPITPKTFGSVR+ RVLSNDTASALKEQEKSQ
Sbjct: 1 MTASAPTPTPMVSFPKLVADDEGPLLANGSLYRSIIGKLQYLCITRPDLAYCVNKLSQYMNAPREVHWRAVKRALHYLSGTINHRLFYSKSQFQLTCYSYTDWASSIEDRHSTTGYVVYLGSNLVAWCSKKQAVVSRSTSEAEFKSLANFVSEFLWIKQLLEEVGVITCQTPV--------------------------------------NYVLSDKQIVDALTKPITPKTFGSVRQVLRVLSNDTASALKEQEKSQ 220
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1050648895|ref|XP_017647815.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium arboreum]) HSP 1 Score: 385.956 bits (990), Expect = 2.068e-132 Identity = 183/263 (69.58%), Postives = 217/263 (82.51%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSN-DTASALKEQEKSQ 258
M+ ++ TPTPMVS PKLVA D+SP ADG LYRSI+G LQ++CITRPDL++ V KLSQYMNAP E HW AVKRVLRYL GT++HGLF SK QF+L YSDADWASS+ED RSTTGYV+YL N + WCSKKQ VVSRS+SEAEYRSLANCV+ELLW+KQ L+E+G+ CQ+PV+WCDNTSTVSM AN THHA+VKHVEIDHHFVREKV+DG N+VP +KQ+AD LTKPITPK F + RRA VLS+ D + + K EK++
Sbjct: 36 MSGASTTPTPMVSTPKLVAFDDSPPFADGPLYRSIVGMLQYVCITRPDLSFCVDKLSQYMNAPSEAHWTAVKRVLRYLLGTLDHGLFLSKGQFELVGYSDADWASSVEDWRSTTGYVIYLGLNPITWCSKKQPVVSRSSSEAEYRSLANCVAELLWVKQLLDELGMPPCQSPVVWCDNTSTVSMAANPTHHARVKHVEIDHHFVREKVVDGTLLVNFVPSEKQVADVLTKPITPKQFATFRRALCVLSSADVSFSPKGVEKTR 298
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1050619729|ref|XP_017632665.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium arboreum]) HSP 1 Score: 388.652 bits (997), Expect = 2.326e-132 Identity = 181/253 (71.54%), Postives = 211/253 (83.40%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTAS 249
M ++ TPTPMVS PKLVA D+SP ADG LYRSI+G LQ++CITRPDL++ V+KLSQYMNAP E HW AVKRVLRYL GT++HGLF SK QF+L YS+ADWASS+EDRRSTTGYV+YL SN + WCSKKQ VVSRS+SEAEYRSLANCV+ELLW+KQ L+E+G+ CQ+PV+WCDNTSTVS+ N THHA+VKHVEIDHHFVR KVLDG N+VP DKQ+AD LTKPITPK F + RRAF VLS+ S
Sbjct: 108 MPGASTTPTPMVSTPKLVASDDSPPFADGPLYRSIVGMLQYVCITRPDLSFCVNKLSQYMNAPSEAHWTAVKRVLRYLLGTLDHGLFLSKGQFELVGYSNADWASSVEDRRSTTGYVIYLGSNPITWCSKKQLVVSRSSSEAEYRSLANCVAELLWVKQLLDELGMPPCQSPVVWCDNTSTVSIAVNPTHHARVKHVEIDHHFVRGKVLDGTLLVNFVPSDKQVADVLTKPITPKQFVTFRRAFCVLSSADVS 360
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1050626122|ref|XP_017635961.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium arboreum]) HSP 1 Score: 375.17 bits (962), Expect = 2.609e-128 Identity = 175/253 (69.17%), Postives = 208/253 (82.21%), Query Frame = 0
Query: 1 MTASAPTPTPMV---SFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSND 246
M ++ TPTPMV + PKLVA D +PLL DG LYRS++G LQ++CITRPDL++ V+KLSQYMN+P E HW+AVKR LRYL GT++HGL++SK QF L YSDADWASSI+DRRSTTGY+VYL +N VAWCSKKQ VVSRS+SEAEYRSLANC+SELLW+KQ LEE+ + CQ PV+WCDNTST+SM AN THHA+VKH+EIDHHFVREKV+DG N+VP KQIAD LTKPITPK F R A RVL+ +
Sbjct: 36 MAGASTTPTPMVWGVTLPKLVASDGNPLLNDGHLYRSVVGMLQYVCITRPDLSFCVNKLSQYMNSPSESHWKAVKRELRYLIGTLDHGLYFSKRQFVLVSYSDADWASSIDDRRSTTGYIVYLGANPVAWCSKKQPVVSRSSSEAEYRSLANCMSELLWVKQLLEELHIPLCQLPVVWCDNTSTISMAANPTHHARVKHMEIDHHFVREKVIDGTLQVNFVPSKKQIADVLTKPITPKQFVLFRHALRVLATN 288
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1028964699|ref|XP_016725846.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 376.711 bits (966), Expect = 2.242e-127 Identity = 175/261 (67.05%), Postives = 211/261 (80.84%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKS 257
+ + PTPTPMVS PKL A +SP L D LYRS++G LQ++CITRPDL++ V+KLSQ+MNAPRE HWRA+KRVLRYL+GTI+HGLF + SQ +L CYSDADWASSIEDRRST+GYVV+L SN VAWCSKKQ VVSRS++EAEYRSLANCVSELLW++Q L E+G+ + PV+WCDN+S VS+ N THHA++KHVEIDHHFVREK+L G N+VP D+QIAD LTKPITPK F + R A RVLS D LK Q+ +
Sbjct: 138 LVEATPTPTPMVSNPKLAASVDSPPLVDVHLYRSVVGMLQYVCITRPDLSFSVNKLSQFMNAPREAHWRALKRVLRYLAGTIDHGLFLTPSQLKLVCYSDADWASSIEDRRSTSGYVVFLGSNPVAWCSKKQPVVSRSSAEAEYRSLANCVSELLWLQQLLAEIGIFPSKVPVVWCDNSSAVSVAENPTHHARMKHVEIDHHFVREKILAGHLQVNFVPSDQQIADVLTKPITPKMFSTFRYALRVLSPDE---LKNQKST 395
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1029034726|ref|XP_016681144.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 364.77 bits (935), Expect = 5.134e-124 Identity = 169/267 (63.30%), Postives = 212/267 (79.40%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRV 263
M +A PTPMVS PKL D SP+ +D SLYRS++G LQ++CITRP+L++ V+KLSQYMN P E HWRAVKRVLRYL GT +HGLF++K + YSDADWASS+EDRRSTTGYVVYL N VAW SKKQ++VSRS+SEAEYRSLANCVSELLW+KQ ++E+G ++ PV+WCDNTSTV++ AN THHA++KHVEIDHHF+R+K+L G N+VP QIAD LTKPITPK F S+R+A RV + + A +++++ENVRV
Sbjct: 36 MIGAAMVPTPMVSVPKLTLSDGSPVFSDASLYRSVVGMLQYVCITRPELSFCVNKLSQYMNCPSETHWRAVKRVLRYLIGTSDHGLFFTKGNAAVVGYSDADWASSVEDRRSTTGYVVYLGPNPVAWSSKKQSMVSRSSSEAEYRSLANCVSELLWVKQLVDEIG-LSQSIPVVWCDNTSTVAIAANPTHHARMKHVEIDHHFIRKKILTGDLQVNFVPSSGQIADVLTKPITPKQFQSLRKALRVFTLNEALECSNKKETEENVRV 301
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1028995714|ref|XP_016752641.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum] >gi|1029080055|ref|XP_016700202.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum] >gi|1029099791|ref|XP_016709241.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 360.918 bits (925), Expect = 6.880e-123 Identity = 172/262 (65.65%), Postives = 204/262 (77.86%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
M +A TPTPMVS PKLVA D SP AD LYRS++G LQ++CITRPDL++ +KLSQYM+AP + HWRAVKRVLRYL+GT++HGL + Q +L YSDADWASSIEDRRST+GYVVYL SN VAWCSKKQ+VVSRS++EAEYRSLANCVSELL I+Q L EVG+ + P IWCDN+STVS+ N THH K+KHVEIDHHFVREK+L G N+VP +QIAD LTKPITPK F S RRA RVL + K ++ +
Sbjct: 17 MLGAASTPTPMVSTPKLVASDGSPPFADVHLYRSVVGMLQYVCITRPDLSFCTNKLSQYMSAPSDTHWRAVKRVLRYLAGTMDHGLCLTAGQLELVGYSDADWASSIEDRRSTSGYVVYLGSNPVAWCSKKQSVVSRSSAEAEYRSLANCVSELLSIQQLLNEVGMSMSKIPTIWCDNSSTVSVAENPTHHTKMKHVEIDHHFVREKILAGCLQVNFVPSAQQIADVLTKPITPKQFSSFRRALRVLPSKDLCTTKTNKQGE 278
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1028972755|ref|XP_016729834.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 359.762 bits (922), Expect = 1.924e-122 Identity = 171/262 (65.27%), Postives = 204/262 (77.86%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
M +A TPTPMVS PKLVA D SP +D LYRS++G LQ++CITRPDL++ +KLSQYM+AP + HWRAVKRVLRYL+GT++HGL + Q +L YSDADWASSIEDRRST+GYVVYL SN VAWCSKKQ+VVSRS++EAEYRSLANCVSELL I+Q L EVG+ + P IWCDN+STVS+ N THH K+KHVEIDHHFVREK+L G N+VP +QIAD LTKPITPK F S RRA RVL + K ++ +
Sbjct: 17 MLGAASTPTPMVSTPKLVASDGSPPFSDVHLYRSVVGMLQYVCITRPDLSFCTNKLSQYMSAPSDTHWRAVKRVLRYLAGTMDHGLCLTAGQLELVGYSDADWASSIEDRRSTSGYVVYLGSNPVAWCSKKQSVVSRSSAEAEYRSLANCVSELLSIQQLLNEVGMSMSKIPTIWCDNSSTVSVAENPTHHTKMKHVEIDHHFVREKILAGCLQVNFVPSAQQIADVLTKPITPKQFSSFRRALRVLPSKDLCTTKTNKQGE 278
BLAST of Gh_A08G206300.1 vs. NCBI nr
Match: gi|1029120940|ref|XP_016738906.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Gossypium hirsutum]) HSP 1 Score: 363.229 bits (931), Expect = 4.472e-122 Identity = 164/259 (63.32%), Postives = 207/259 (79.92%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQE 255
M +A TPTPM++ PKL D SPL D LYRS++G LQ++C+TRPD+++ V+KLSQ+MN+P + HWRAVKRVLRYL+GT++HGL++SK Q L CYSDADWASS++DRRS +GYVVY+ NL+AWCSKKQ+VVSRS++EAEY SLANCVSELLWIKQ ++EVG+ +TPVIWCDN+S VS+ N THHA++KHV+IDHHF REK+L G N+VP D+QIAD LTKP+TPK F RRA RV+S + A K E
Sbjct: 138 MVEAAMTPTPMLNTPKLTVSDNSPLFFDIHLYRSVVGMLQYVCVTRPDISFCVNKLSQFMNSPSDNHWRAVKRVLRYLAGTLDHGLYFSKGQPDLVCYSDADWASSVDDRRSISGYVVYIGPNLIAWCSKKQSVVSRSSAEAEYHSLANCVSELLWIKQLMDEVGIAVAKTPVIWCDNSSAVSVAENPTHHARMKHVDIDHHFEREKILAGLLQVNFVPSDQQIADVLTKPVTPKNFAWFRRALRVVSFNELGAQKSTE 396
BLAST of Gh_A08G206300.1 vs. Araport11
Match: gnl|BL_ORD_ID|33807 (AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 182.57 bits (462), Expect = 6.794e-52 Identity = 92/245 (37.55%), Postives = 149/245 (60.82%), Query Frame = 0
Query: 1 MTASAPTPTPM---VSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYS-KSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREK-----VLDGNYVPFDKQIADALTKPITPKTFGSV 236
+ P+ PM V+F D D YR +IG+L +L ITR D+++ V+KLSQ+ APR H +AV ++L Y+ GT+ GLFYS +++ QL +SDA + S + RRST GY ++L ++L++W SKKQ VVS+S++EAEYR+L+ E++W+ QF E+ + + +++CDNT+ + + N H + KH+E D H VRE+ L ++ +D+Q D T+ ++P G++
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGD----FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTI 586
BLAST of Gh_A08G206300.1 vs. Araport11
Match: gnl|BL_ORD_ID|33806 (AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 182.57 bits (462), Expect = 6.794e-52 Identity = 92/245 (37.55%), Postives = 149/245 (60.82%), Query Frame = 0
Query: 1 MTASAPTPTPM---VSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYS-KSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREK-----VLDGNYVPFDKQIADALTKPITPKTFGSV 236
+ P+ PM V+F D D YR +IG+L +L ITR D+++ V+KLSQ+ APR H +AV ++L Y+ GT+ GLFYS +++ QL +SDA + S + RRST GY ++L ++L++W SKKQ VVS+S++EAEYR+L+ E++W+ QF E+ + + +++CDNT+ + + N H + KH+E D H VRE+ L ++ +D+Q D T+ ++P G++
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGD----FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTI 586
BLAST of Gh_A08G206300.1 vs. Araport11
Match: gnl|BL_ORD_ID|48304 (ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227709-228431 REVERSE LENGTH=240 | 201606) HSP 1 Score: 129.798 bits (325), Expect = 3.327e-36 Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0
Query: 7 TPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSK-SQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLW 156
TP P+ KL + + D S +RSI+G LQ+L +TRPD++Y V+ + Q M+ P + +KRVLRY+ GTI HGL+ K S+ + + D+DWA RRSTTG+ +L N+++W +K+Q VSRS++E EYR+LA +EL W
Sbjct: 79 TPLPL----KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Gh_A08G206300.1 vs. Araport11
Match: gnl|BL_ORD_ID|48256 (ATMG00240.1 | Gag-Pol-related retrotransposon family protein | ChrM:68918-69253 REVERSE LENGTH=111 | 201606) HSP 1 Score: 80.8777 bits (198), Expect = 3.998e-19 Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 0
Query: 41 FLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSK-SQFQLTCYSDADWASSIEDRRSTTGY 116
+L ITRPDL + V++LSQ+ +A R +AV +VL Y+ GT+ GLFYS S QL ++D+DWAS + RRS TG+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGF 78
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8LIX0_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107926948 PE=4 SV=1) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS 274
MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS
Sbjct: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRVTNKTNKLVNSS 274
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8LB05_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107925587 PE=4 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 3.852e-134 Identity = 197/258 (76.36%), Postives = 203/258 (78.68%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
MTASAPTPTPMVSFPKLVADDE PLLA+GSLYRSIIGKLQ+LCITRPDLAY V+KLSQYMNAPREVHWRAVKR L YLSGTINH LFYSKSQFQLTCYS DWASSIEDR STTGYVVYL SNLVAWCSKKQAVVSRSTSEAE++SLAN VSE LWIKQ LEEVGVITCQTPV NYV DKQI DALTKPITPKTFGSVR+ RVLSNDTASALKEQEKSQ
Sbjct: 1 MTASAPTPTPMVSFPKLVADDEGPLLANGSLYRSIIGKLQYLCITRPDLAYCVNKLSQYMNAPREVHWRAVKRALHYLSGTINHRLFYSKSQFQLTCYSYTDWASSIEDRHSTTGYVVYLGSNLVAWCSKKQAVVSRSTSEAEFKSLANFVSEFLWIKQLLEEVGVITCQTPV--------------------------------------NYVLSDKQIVDALTKPITPKTFGSVRQVLRVLSNDTASALKEQEKSQ 220
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8MG77_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107937473 PE=4 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 1.884e-127 Identity = 175/261 (67.05%), Postives = 211/261 (80.84%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKS 257
+ + PTPTPMVS PKL A +SP L D LYRS++G LQ++CITRPDL++ V+KLSQ+MNAPRE HWRA+KRVLRYL+GTI+HGLF + SQ +L CYSDADWASSIEDRRST+GYVV+L SN VAWCSKKQ VVSRS++EAEYRSLANCVSELLW++Q L E+G+ + PV+WCDN+S VS+ N THHA++KHVEIDHHFVREK+L G N+VP D+QIAD LTKPITPK F + R A RVLS D LK Q+ +
Sbjct: 138 LVEATPTPTPMVSNPKLAASVDSPPLVDVHLYRSVVGMLQYVCITRPDLSFSVNKLSQFMNAPREAHWRALKRVLRYLAGTIDHGLFLTPSQLKLVCYSDADWASSIEDRRSTSGYVVFLGSNPVAWCSKKQPVVSRSSAEAEYRSLANCVSELLWLQQLLAEIGIFPSKVPVVWCDNSSAVSVAENPTHHARMKHVEIDHHFVREKILAGHLQVNFVPSDQQIADVLTKPITPKMFSTFRYALRVLSPDE---LKNQKST 395
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8IYX5_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107899918 PE=4 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 4.313e-124 Identity = 169/267 (63.30%), Postives = 212/267 (79.40%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQENVRV 263
M +A PTPMVS PKL D SP+ +D SLYRS++G LQ++CITRP+L++ V+KLSQYMN P E HWRAVKRVLRYL GT +HGLF++K + YSDADWASS+EDRRSTTGYVVYL N VAW SKKQ++VSRS+SEAEYRSLANCVSELLW+KQ ++E+G ++ PV+WCDNTSTV++ AN THHA++KHVEIDHHF+R+K+L G N+VP QIAD LTKPITPK F S+R+A RV + + A +++++ENVRV
Sbjct: 36 MIGAAMVPTPMVSVPKLTLSDGSPVFSDASLYRSVVGMLQYVCITRPELSFCVNKLSQYMNCPSETHWRAVKRVLRYLIGTSDHGLFFTKGNAAVVGYSDADWASSVEDRRSTTGYVVYLGPNPVAWSSKKQSMVSRSSSEAEYRSLANCVSELLWVKQLVDEIG-LSQSIPVVWCDNTSTVAIAANPTHHARMKHVEIDHHFIRKKILTGDLQVNFVPSSGQIADVLTKPITPKQFQSLRKALRVFTLNEALECSNKKETEENVRV 301
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8PN68_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107960901 PE=4 SV=1) HSP 1 Score: 360.918 bits (925), Expect = 5.780e-123 Identity = 172/262 (65.65%), Postives = 204/262 (77.86%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
M +A TPTPMVS PKLVA D SP AD LYRS++G LQ++CITRPDL++ +KLSQYM+AP + HWRAVKRVLRYL+GT++HGL + Q +L YSDADWASSIEDRRST+GYVVYL SN VAWCSKKQ+VVSRS++EAEYRSLANCVSELL I+Q L EVG+ + P IWCDN+STVS+ N THH K+KHVEIDHHFVREK+L G N+VP +QIAD LTKPITPK F S RRA RVL + K ++ +
Sbjct: 17 MLGAASTPTPMVSTPKLVASDGSPPFADVHLYRSVVGMLQYVCITRPDLSFCTNKLSQYMSAPSDTHWRAVKRVLRYLAGTMDHGLCLTAGQLELVGYSDADWASSIEDRRSTSGYVVYLGSNPVAWCSKKQSVVSRSSAEAEYRSLANCVSELLSIQQLLNEVGMSMSKIPTIWCDNSSTVSVAENPTHHTKMKHVEIDHHFVREKILAGCLQVNFVPSAQQIADVLTKPITPKQFSSFRRALRVLPSKDLCTTKTNKQGE 278
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8MW78_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107940883 PE=4 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 1.616e-122 Identity = 171/262 (65.27%), Postives = 204/262 (77.86%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQ 258
M +A TPTPMVS PKLVA D SP +D LYRS++G LQ++CITRPDL++ +KLSQYM+AP + HWRAVKRVLRYL+GT++HGL + Q +L YSDADWASSIEDRRST+GYVVYL SN VAWCSKKQ+VVSRS++EAEYRSLANCVSELL I+Q L EVG+ + P IWCDN+STVS+ N THH K+KHVEIDHHFVREK+L G N+VP +QIAD LTKPITPK F S RRA RVL + K ++ +
Sbjct: 17 MLGAASTPTPMVSTPKLVASDGSPPFSDVHLYRSVVGMLQYVCITRPDLSFCTNKLSQYMSAPSDTHWRAVKRVLRYLAGTMDHGLCLTAGQLELVGYSDADWASSIEDRRSTSGYVVYLGSNPVAWCSKKQSVVSRSSAEAEYRSLANCVSELLSIQQLLNEVGMSMSKIPTIWCDNSSTVSVAENPTHHTKMKHVEIDHHFVREKILAGCLQVNFVPSAQQIADVLTKPITPKQFSSFRRALRVLPSKDLCTTKTNKQGE 278
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8NIN8_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107948774 PE=4 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 3.757e-122 Identity = 164/259 (63.32%), Postives = 207/259 (79.92%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQE 255
M +A TPTPM++ PKL D SPL D LYRS++G LQ++C+TRPD+++ V+KLSQ+MN+P + HWRAVKRVLRYL+GT++HGL++SK Q L CYSDADWASS++DRRS +GYVVY+ NL+AWCSKKQ+VVSRS++EAEY SLANCVSELLWIKQ ++EVG+ +TPVIWCDN+S VS+ N THHA++KHV+IDHHF REK+L G N+VP D+QIAD LTKP+TPK F RRA RV+S + A K E
Sbjct: 138 MVEAAMTPTPMLNTPKLTVSDNSPLFFDIHLYRSVVGMLQYVCVTRPDISFCVNKLSQFMNSPSDNHWRAVKRVLRYLAGTLDHGLYFSKGQPDLVCYSDADWASSVDDRRSISGYVVYIGPNLIAWCSKKQSVVSRSSAEAEYHSLANCVSELLWIKQLMDEVGIAVAKTPVIWCDNSSAVSVAENPTHHARMKHVDIDHHFEREKILAGLLQVNFVPSDQQIADVLTKPVTPKNFAWFRRALRVVSFNELGAQKSTE 396
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8HV13_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107889801 PE=4 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 9.280e-121 Identity = 167/265 (63.02%), Postives = 206/265 (77.74%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKL-VADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASALKEQEKSQEN 260
M +A TPTPMVS+PKL +A +S D LYRS IG LQ+LC+TRPD+++ V+KLSQYMN P E HW+AVKRVLRYL+GTI+HGLF+S+ QF+L CYSDADWASS+EDRRSTTGYV+ L N +AWCSKKQ V+SRS++EAEYRSLA+CVSE+LW++Q L EVGV P +WCDNTSTVSM AN T+HA+VKH+EIDHHFVREKV DG N+VP QIAD LTKP+ PK F +R A RV + D + L+ +E + +
Sbjct: 68 MEGAANTPTPMVSYPKLKLATSDSDQTVDERLYRSTIGMLQYLCVTRPDISFSVNKLSQYMNPPGEAHWKAVKRVLRYLAGTIDHGLFFSRGQFKLVCYSDADWASSVEDRRSTTGYVILLGPNPIAWCSKKQPVMSRSSTEAEYRSLASCVSEILWVRQLLNEVGVCMAHAPTVWCDNTSTVSMSANPTNHARVKHIEIDHHFVREKVADGSLQVNFVPSANQIADVLTKPLAPKQFVGLRSALRVTTKDESIVLENRENPEND 332
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8I4S4_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107892647 PE=4 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 1.312e-119 Identity = 162/241 (67.22%), Postives = 193/241 (80.08%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVR 237
+ + P PTPMV KLV ++SP ADG LYRS++G LQ+LCITRPDLA+YV KLSQ+MN+P + HW+ VKRVLRY TI+HGLF + F+L CYSDADW + ++DRRSTTGYVVYL SN +AWCSKKQAVVSRS+SEAEYRSLANCVSELLWIKQ ++E+G+ CQT V+WCDNTSTV+M AN THHA++KHVEIDHHFVREKVLD N+VP KQ+AD LTK I+PK F R
Sbjct: 68 IIGATPMPTPMVVTSKLVVSNDSPPFADGPLYRSVVGMLQYLCITRPDLAFYVKKLSQFMNSPSDTHWKVVKRVLRYPVETIDHGLFLTNGLFELVCYSDADWVAFVDDRRSTTGYVVYLRSNPIAWCSKKQAVVSRSSSEAEYRSLANCVSELLWIKQLVDEIGLAPCQTLVVWCDNTSTVTMAANPTHHARMKHVEIDHHFVREKVLDDVLQVNFVPSTKQVADVLTKSISPKQFTVFR 308
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Match: A0A1U8JSX0_GOSHI (uncharacterized mitochondrial protein AtMg00810-like OS=Gossypium hirsutum OX=3635 GN=LOC107910121 PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 2.826e-115 Identity = 155/248 (62.50%), Postives = 196/248 (79.03%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLS 244
M + PTPTPMVS PKLV D SP L D LYRS++G LQ++CITRP+L++ V+KLSQ+MN+P E HW+A+KRVLRYL GT+++ F S Q +L CYSDADWASS+EDRRST+GYVV+L N +AW SKKQ VVSRS++EAEYRSLANCV+ELLW++Q L+EVG+ + + PVIWCDN++ VS+ N T +AK+KHVEIDH FVREK+ G N++P ++QIAD LTKPITPK F + R A VLS
Sbjct: 68 MVGATPTPTPMVSTPKLVTSDGSPQLVDAHLYRSVVGMLQYVCITRPELSFSVNKLSQFMNSPSETHWKAIKRVLRYLIGTMDYRRFLSTGQLELVCYSDADWASSVEDRRSTSGYVVFLGPNPIAWSSKKQPVVSRSSAEAEYRSLANCVAELLWLQQLLKEVGISSSKLPVIWCDNSAAVSVAENPTQNAKMKHVEIDHQFVREKIHAGLLQVNFIPSEQQIADVLTKPITPKMFSAFRHALGVLS 315
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 5.462e-67 Identity = 114/248 (45.97%), Postives = 155/248 (62.50%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQ-FQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGN----YVPFDKQIADALTKPITPKTFGSVRRAFRVL 243
M + P TPM + PKL + L D + YR I+G LQ+L TRPDL+Y V++LSQYM+ P + HW A+KRVLRYL+GT +HG+F K L YSDADWA +D ST GY+VYL + ++W SKKQ V RS++EAEYRS+AN SEL WI L E+G+ PVI+CDN + AN H+++KH+ +D+HF+R +V G +V Q+AD LTKP++ F + R V+
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKL-PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVI 1444
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 2.362e-64 Identity = 110/238 (46.22%), Postives = 151/238 (63.45%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQ-FQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGN----YVPFDKQIADALTKPITPKTF 233
M + P TPM PKL + L D + YR I+G LQ+L TRPD++Y V++LSQ+M+ P E H +A+KR+LRYL+GT NHG+F K L YSDADWA +D ST GY+VYL + ++W SKKQ V RS++EAEYRS+AN SE+ WI L E+G+ + PVI+CDN + AN H+++KH+ ID+HF+R +V G +V Q+AD LTKP++ F
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKL-TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 1.864e-42 Identity = 92/257 (35.80%), Postives = 150/257 (58.37%), Query Frame = 0
Query: 4 SAPTPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCI-TRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKS---QFQLTCYSDADWASSIEDRRSTTGYVVYL-ESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPV-IWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDG----NYVPFDKQIADALTKPITPKTFGSVRRAFRVLSNDTASA 250
S P P+ +++ L +D++ + RS+IG L ++ + TRPDL V+ LS+Y + W+ +KRVLRYL GTI+ L + K+ + ++ Y D+DWA S DR+STTGY+ + + NL+ W +K+Q V+ S++EAEY +L V E LW+K L + I + P+ I+ DN +S+ N + H + KH++I +HF RE+V + Y+P + Q+AD TKP+ F +R +L +D ++A
Sbjct: 1159 STPLPSK-INYELLNSDEDC-----NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSIN-IKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQDDQSNA 1408
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.928e-39 Identity = 83/244 (34.02%), Postives = 139/244 (56.97%), Query Frame = 0
Query: 1 MTASAPTPTPMVSFPKLVADDESPLLAD--GSL----YRSIIGKLQF-LCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVIWCDNTSTVSMVANTTHHAKVKHVEIDHHFVREKVLDGNY----VPFDKQIADALTKPITPKTF 233
M + P TP+ KL + P + G++ Y S +G L + + TRPD+A+ V +S+++ P + HW AVK +LRYL GT L + S L Y+DAD A I++R+S+TGY+ ++W SK Q V+ ST+EAEY + E++W+K+FL+E+G + + V++CD+ S + + N+ +HA+ KH+++ +H++RE V D + + ++ AD LTK + F
Sbjct: 1075 MKNAKPVSTPLAGHLKL-SKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG-LHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.203e-35 Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0
Query: 7 TPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSK-SQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLW 156
TP P+ KL + + D S +RSI+G LQ+L +TRPD++Y V+ + Q M+ P + +KRVLRY+ GTI HGL+ K S+ + + D+DWA RRSTTG+ +L N+++W +K+Q VSRS++E EYR+LA +EL W
Sbjct: 79 TPLPL----KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.595e-19 Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 0
Query: 7 TPTPMVSFPKLVADDESPLLADGSLYRSIIGKLQFLCIT-RPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFY-SKSQFQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKK-QAVVSRSTSEAEYRSLANCVSEL 154
T TP+ + K + + SP L D + Y+SI+G+L F T RPD++Y V LS+++ PR +H + +RVLRYL T + L Y S SQ LT Y DA + + ST GYV L V W SKK + V+ ++EAEY + + V E+
Sbjct: 159 TQTPLCN-SKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 GN=AtMg00240 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.848e-18 Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 0
Query: 41 FLCITRPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSK-SQFQLTCYSDADWASSIEDRRSTTGY 116
+L ITRPDL + V++LSQ+ +A R +AV +VL Y+ GT+ GLFYS S QL ++D+DWAS + RRS TG+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGF 78
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Match: YD11B_YEAST (Transposon Ty1-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-DR1 PE=3 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 7.843e-7 Identity = 54/234 (23.08%), Postives = 106/234 (45.30%), Query Frame = 0
Query: 21 DESPLLADGSLYRSIIGKLQFLCIT--------RPDLAYYVHKLSQYMNAPREVHWRAVKRVLRYLSGTINHGLFYSKSQ-----FQLTCYSDADWASSIEDRRSTTGYVVYLESNLVAWCSKKQAVVSRSTSEAEYRSLANCVSELLWIKQFLEEVGVITCQTPVI---WCDNTSTVSMVANTTHHA-KVKHVEIDHHFVREKVLDGN----YVPFDKQIADALTKPITPKTF 233
D+ L D Y+ + ++Q L R DL YY++ L+Q++ P +++++ T + L + K++ +L SDA + + +S G + L ++ S K ++ ST+EAE +++ + L + ++E+ + P+I D+ ST+S++ +T + + +R++V N Y+ K IAD +TKP+ KTF
Sbjct: 1518 DQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPY-YKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQELN----KKPIIKGSLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1746 The following BLAST results are available for this feature:
BLAST of Gh_A08G206300.1 vs. NCBI nr
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of Gh_A08G206300.1 vs. Araport11
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs arabidopsis Araport11) Total hits: 4
BLAST of Gh_A08G206300.1 vs. ExPASy TrEMBL
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Gh_A08G206300.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 8
InterPro
Analysis Name: InterProScan Analysis for TM1-CRI v1.0.a1 Gossypium hirsutum proteins
Date Performed: 2019-09-18
Sequences
The
following sequences are available for this feature:
protein sequence of Gh_A08G206300.1_CRI-TM1_v1 >Gh_A08G206300.1_CRI-TM1_v1 ID=Gh_A08G206300.1_CRI-TM1_v1; Name=Gh_A08G206300.1_CRI-TM1_v1; organism=Gossypium hirsutum; type=polypeptide; length=275bpback to top mRNA from alignment at A08:116135989..116136813+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Gh_A08G206300.1_CRI-TM1_v1 ID=Gh_A08G206300.1_CRI-TM1_v1; Name=Gh_A08G206300.1; organism=Gossypium hirsutum; type=mRNA; length=825bp; location=Sequence derived from: A08:116135989..116136813+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at A08:116135989..116136813+ >Gh_A08G206300.1_CRI-TM1_v1 ID=Gh_A08G206300.1_CRI-TM1_v1; Name=Gh_A08G206300.1; organism=Gossypium hirsutum; type=CDS; length=825bp; location=Sequence derived from: A08:116135989..116136813+ (Gossypium hirsutumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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