GB_A13G1185, GB_A13G1185_ZJU-AD2_v1.1.a1 (mRNA) Gossypium barbadense
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|802607796|ref|XP_012073994.1| (uncharacterized protein LOC105635536 [Jatropha curcas]) HSP 1 Score: 270.011 bits (689), Expect = 1.482e-84 Identity = 132/265 (49.81%), Postives = 168/265 (63.40%), Query Frame = 0
Query: 2 LKSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD-----------------------------------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDV 225
LK+F + ++ T +PDW LPFE+MC AS A+G V+GQR +K H IYYA+ LT Q+NYT EKE+L +V+ DKFRSYL G KV +Y DHSE+KYL KKDAKP LIRWVLLLQ+ GGH T +KVL++ F+WPTLF DA +V +CDRCQRV N + ++EMP +NI+EVE+FDV GIDF+GPFP+S G YILVAVD+VS+WVEA+A +TN+
Sbjct: 135 LKAFNTLKNALVSATIMAKPDWGLPFEIMCDASGVAVGYVLGQRHDKKLHVIYYASHDLTSTQMNYTTIEKEMLAVVYECDKFRSYLFGAKVIIYTDHSELKYLFTKKDAKPHLIRWVLLLQEFDPTIWDEPFLFKICMDGMIRRCVGETEIQDILIHCHSSLYGGHHRANRTASKVLESCFYWPTLFPDARIFVSHCDRCQRVGNISRKDEMPLSNILEVEIFDVWGIDFMGPFPISQGKSYILVAVDYVSKWVEAQASITNNA 399
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|823251196|ref|XP_012458204.1| (PREDICTED: uncharacterized protein LOC105778998 [Gossypium raimondii]) HSP 1 Score: 253.447 bits (646), Expect = 3.317e-80 Identity = 126/211 (59.72%), Postives = 151/211 (71.56%), Query Frame = 0
Query: 30 MCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD------GGHFEGTHTV--------AKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
MC S + +G VMGQRRNKVFHPIY+A+RTLT AQLNYT+ EKEL+ +VF FDKF SYL+GTKV V+ DH+ IKYLL KKD KPRLIRW+LLLQ+ F V +V Q+ F D + + NCD+CQR N + RNEMP TNI+E+ELFDV GIDFLGPFP S+G+KYILVAVD+VS+WVEAEAY TND +
Sbjct: 1 MCDGSGYTVGAVMGQRRNKVFHPIYFASRTLTRAQLNYTVTEKELVAMVFTFDKFCSYLIGTKVIVFTDHAAIKYLLTKKDTKPRLIRWILLLQEFDLEIQDRKFVENQVVDHLLILEQDEVTQSRVTINENFPDEHLF--NCDKCQRTGNISRRNEMPLTNILEIELFDVWGIDFLGPFPSSYGNKYILVAVDYVSKWVEAEAYHTNDAK 209
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|1219062707|ref|XP_021757232.1| (uncharacterized protein LOC110722265 [Chenopodium quinoa]) HSP 1 Score: 251.906 bits (642), Expect = 1.346e-73 Identity = 128/284 (45.07%), Postives = 166/284 (58.45%), Query Frame = 0
Query: 2 LKSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQDGG----HFEGTHTVAK-----------------------------VLQAEFFW--------------------------PTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
LK+F +E++ + PDW LPFE+MC ASD+A+G V+GQR+ K H IYYA++TL+ AQ+NY EKE+L +++A DKF SYLVG+KV ++ DH+ ++YL+ K AKPRLIRW+L LQD +GT V +LQ E W PT+FKD YAYV CDRCQR + +NEMP NI+EVELFDV GIDF+GPFP S+G+ YIL+AVD+VS+WVEA A TND R
Sbjct: 830 LKAFNRLKEALISAPVMQTPDWSLPFEIMCDASDYAVGAVLGQRKEKKLHAIYYASKTLSSAQMNYATTEKEMLAVIYAIDKFHSYLVGSKVIIHTDHAALRYLMTKTHAKPRLIRWILQLQDYDIEIKDTKGTENVVADHLSRLILDPENGDEVPFDDSFPAEHLLVLLQTESPWFADLANFLSTGPSKTIAKILQCGFYWPTMFKDTYAYVTACDRCQRTGTISKKNEMPLNNILEVELFDVWGIDFMGPFPSSYGNNYILLAVDYVSKWVEAIATPTNDAR 1113
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|922411269|ref|XP_013632937.1| (PREDICTED: uncharacterized protein LOC106338524 [Brassica oleracea var. oleracea]) HSP 1 Score: 230.72 bits (587), Expect = 3.969e-72 Identity = 117/226 (51.77%), Postives = 151/226 (66.81%), Query Frame = 0
Query: 30 MCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRW-------------------------VLLLQDG----GHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
M ASDFA+G V+GQR++K H IYYA++T+ AQ +T EKELL IVFAF+KFRSYLVG+KV V+ D++ +KYLL KKDAKPR W +L G GHF TV+K+LQA F+WPT+F+DA+AY+ CD CQR+ N T RNEM + I+EVE+FD G+DF+GPFP SF ++YILVAVD+VS+WVEA A TN+ +
Sbjct: 1 MTDASDFAVGAVLGQRKDKKLHVIYYASKTMDEAQCRFTTTEKELLAIVFAFEKFRSYLVGSKVIVHTDNTALKYLLTKKDAKPRQYVWDEPYLYKHCKEDIFRRCVPEVEIPGILHHCYGSSYAGHFTTFKTVSKILQAGFWWPTMFRDAHAYIARCDACQRLGNITKRNEMSQNYILEVEVFDCWGVDFMGPFPPSFKNEYILVAVDYVSKWVEAVASPTNETK 226
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|985444531|ref|XP_015384888.1| (PREDICTED: uncharacterized protein LOC107176615 [Citrus sinensis]) HSP 1 Score: 233.417 bits (594), Expect = 6.694e-72 Identity = 117/229 (51.09%), Postives = 147/229 (64.19%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD---------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDR--------CQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
PDW LPF+LMC ASD ++G V+GQR+NKVFH IYYA++TLT AQ+NYT EKELL +VFAF KFR+YLVGTKVT+Y DH+ IK+L++KKDAK RL+RW+LLL++ H A L E T + ++ CQR N T R EMP TNI+EVE+FD+ GI+F+G FP SFG+ YI+VAVD+V WVEA ND R
Sbjct: 29 PDWTLPFKLMCDASDHSVGAVLGQRKNKVFHSIYYASKTLTQAQINYTTTEKELLAVVFAFVKFRAYLVGTKVTLYTDHAAIKHLISKKDAKSRLMRWILLLREFDLEIKDRKGTENQVADHLSKLEADASTLTKEDITETFLDEQLLIIQQAQMLQQSGFPWCQRTGNITQRREMPLTNILEVEIFDIWGINFMGHFPPSFGNLYIMVAVDYVFNWVEATTLPINDAR 257
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|698496268|ref|XP_009794193.1| (PREDICTED: uncharacterized protein LOC104240991 [Nicotiana sylvestris]) HSP 1 Score: 244.588 bits (623), Expect = 1.308e-71 Identity = 116/206 (56.31%), Postives = 145/206 (70.39%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQDGGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
PDW+ PFELMC ASD+A+G V+GQR++KV HPIYYA+RTL+GAQLNYT+ EKE+L +VFAFDKFRSYL+G+K A P GG+F G T KVL+A F+WPT+FKDA+ +VK C+ CQR N + R+EMP I +VE+FDV GIDF+GPF S+G+KYILVAVD+VS+WVEA TND R
Sbjct: 523 PDWEQPFELMCDASDYAVGAVLGQRKDKVMHPIYYASRTLSGAQLNYTVTEKEMLAVVFAFDKFRSYLIGSKAC---------------HASPY----------GGYFGGVWTTTKVLEAGFYWPTIFKDAHQWVKGCNECQRTGNISRRHEMPMNPIQQVEVFDVWGIDFMGPFVSSYGNKYILVAVDYVSKWVEAATLPTNDSR 703
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|697191259|ref|XP_009604698.1| (PREDICTED: uncharacterized protein K02A2.6-like [Nicotiana tomentosiformis]) HSP 1 Score: 233.802 bits (595), Expect = 1.495e-71 Identity = 110/213 (51.64%), Postives = 147/213 (69.01%), Query Frame = 0
Query: 26 PFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWV------LLLQD------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
PFE+MC ASD +G V+ QR+ K+F PIYYA+R L AQ+NY +KE +VF+FDKFRS LVG+KV VY DHS +KYLL+KK++K RL+R V +L GGH+ G HT AK ++ +WPTL+KDA Y+ CD+CQR N + R+EMP +I+ E+FDV GIDF+G FP S+ ++YILVA+D+VS+W EA T+D R
Sbjct: 161 PFEIMCDASDVVMGAVLWQRKEKMFRPIYYASRMLNDAQVNYATTKKEFFAVVFSFDKFRSDLVGSKVIVYTDHSALKYLLSKKESKARLMRCVPEGEIASILSHCHDGAVGGHYGGNHTAAKFIEVSLYWPTLYKDAKTYIAACDKCQRSGNISKRDEMPLNSILVCEVFDVWGIDFMGLFPSSYSYEYILVAIDYVSKWAEAIPTKTSDAR 373
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|147819185|emb|CAN64733.1| (hypothetical protein VITISV_015385 [Vitis vinifera]) HSP 1 Score: 241.891 bits (616), Expect = 3.905e-71 Identity = 121/233 (51.93%), Postives = 153/233 (65.67%), Query Frame = 0
Query: 4 SFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPR----------LIRWVLLLQDGGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
SF ++ ++ R P+W LPFELMC ASDF+IG V+G+R + + IYYA +TL AQ NYT EKELL +VFA DKFR+YLVG+ + V+ DHS +KYLL K+DAK R ++ G HF T KVL + F WP+LFKDA+ K+CDRCQR+ T RN+MP I+ VELFDV GIDF+GPFP+SFG+ YILV VD+VS+WVEA ND R
Sbjct: 420 SFDQLKKFLTTTPIVRAPNWQLPFELMCDASDFSIGAVLGKREDGKPYVIYYARKTLNEAQRNYTTTEKELLAVVFALDKFRAYLVGSFIIVFTDHSALKYLLTKQDAKARKCVPEDEQQGILNHCHENACGDHFASQKTTMKVLNSGFTWPSLFKDAHIMCKSCDRCQRLGKLTKRNQMPMNPILIVELFDVWGIDFMGPFPMSFGNSYILVGVDYVSKWVEAIPCKQNDHR 652
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|1219104099|ref|XP_021715277.1| (uncharacterized protein LOC110683244 [Chenopodium quinoa]) HSP 1 Score: 243.817 bits (621), Expect = 9.375e-71 Identity = 122/256 (47.66%), Postives = 160/256 (62.50%), Query Frame = 0
Query: 4 SFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD---------GGHFEGTHTVAKVLQAEF-------FW--PTLFK---------------DAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
+F +E + + PDW LPFE+MC ASD+A+G V+GQR+ K H IYYA++TL+ AQ+NY EKE+L +++A DKF SYLVG+KV ++ DH+ ++YL+ K AKPRLIRW+L LQD G H + + +F FW P L+K D YAYV CDRCQR + +NEM NI+EVELFDV GIDF+GPFP S+G+ YIL+AVD+VS+WVEA A TND R
Sbjct: 659 AFNRLKEPLISAPVMQPPDWSLPFEIMCDASDYAVGAVLGQRKEKKLHAIYYASKTLSSAQMNYATTEKEMLALIYAIDKFHSYLVGSKVIIHTDHAALRYLMTKTHAKPRLIRWILQLQDYDIEIKDTRNGECTMPHGYSSQQRKKFLSEARRYFWDDPFLYKQCADYMIRRCIPEIEDTYAYVTACDRCQRTGTISKKNEMSLKNILEVELFDVWGIDFMGPFPSSYGNIYILLAVDYVSKWVEAIATPTNDAR 914
BLAST of GB_A13G1185 vs. NCBI nr
Match: gi|1040812966|ref|XP_017228340.1| (PREDICTED: uncharacterized protein LOC108203727 [Daucus carota subsp. sativus]) HSP 1 Score: 236.498 bits (602), Expect = 9.467e-70 Identity = 117/235 (49.79%), Postives = 159/235 (67.66%), Query Frame = 0
Query: 4 SFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTK-----VTVYMDHSEIKYLLAKKDAKPRLIRW----VLLLQD---GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
+FQ ++ ++ + PDW LPFE+MC ASD+AIG GQR++K H IYYA+RTL AQLNYT +KELLD++FA +KFRSYL+GTK V DH + L+ +++ P + +L +++ GGHF G T KVL+ F+WPT+FKDA + + CDRCQRV N + RNEMP + +VE+FDV GID LGPFP S G +YIL+A+D+VS+WVEA+A TND +
Sbjct: 405 AFQELKQKLTSSPIIQAPDWSLPFEIMCDASDYAIGTAFGQRKDKKVHAIYYASRTLNDAQLNYTTTKKELLDVIFALEKFRSYLLGTKDKKGSENVVADH--LSGLVREEEDVPLTETFSDEQLLQIENYACGGHFGGKRTAHKVLECGFYWPTVFKDAQEFCRTCDRCQRVGNISARNEMPMNPMFDVEIFDVWGIDLLGPFPKSNGFEYILLAIDYVSKWVEAKATQTNDSK 637
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: M750_ARATH (Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 GN=AtMg00750 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.444e-19 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query: 137 VLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFL 192
VLQA F+WPT FKDA+ +V +CD CQR NFT RNEMP+ I+EVE+FDV GI F+
Sbjct: 35 VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.172e-15 Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 0
Query: 4 SFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD 124
+F+ + IS D + PD+ F L ASD A+G V+ Q HP+ Y +RTL ++NY+ EKELL IV+A FR YL+G + DH + +L KD +L RW + L +
Sbjct: 486 AFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG----HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSE 602
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.545e-14 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0
Query: 2 LKSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD 124
+++F+ + I D + PD++ F L AS+ A+G V+ Q HPI + +RTL +LNY+ EKELL IV+A FR YL+G + + DH +++L K+ +L RW + L +
Sbjct: 483 IEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNG----HPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSE 601
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.605e-13 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGT-KVTVYMDHSEIKYLLAKKDAKPRLIRW 118
P + PF L AS++AIG V+ Q PI Y +R+L + NY EKE+L I+++ D R+YL G + VY DH + + L ++ +L RW
Sbjct: 429 PCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRW 527
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.925e-12 Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = 0
Query: 13 SYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTK-VTVYMDHSEIKYLLAKKDAKPRLIRW 118
S D + PD+ PF+L AS IG V+ Q PI +RTL + NY E+ELL IV+A K +++L G++ + ++ DH + + +A ++ ++ RW
Sbjct: 481 SEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRW 583
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.101e-9 Identity = 35/104 (33.65%), Postives = 51/104 (49.04%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD 124
PD+ F + AS A G V+ Q N P+ YA+R T + N + E+EL I +A FR Y+ G TV DH + YL + + +L R L L++
Sbjct: 610 PDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEE 713
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: TF28_SCHPO (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-8 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.577e-8 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 29 LMCHASDFAIGVVMGQRRNK-VFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGT--KVTVYMDHSEI--KYLLAKKDAKPRLIRWVLLLQD 124
L ASD A+G V+ Q+ + ++P+ Y + ++ AQLNY++ +KE+L I+ + +R YL T + DH + + + RL RW L LQD
Sbjct: 710 LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQD 810
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: TF27_SCHPO (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-7 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.577e-8 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 29 LMCHASDFAIGVVMGQRRNK-VFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGT--KVTVYMDHSEI--KYLLAKKDAKPRLIRWVLLLQD 124
L ASD A+G V+ Q+ + ++P+ Y + ++ AQLNY++ +KE+L I+ + +R YL T + DH + + + RL RW L LQD
Sbjct: 710 LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQD 810
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-9 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.592e-8 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 29 LMCHASDFAIGVVMGQRRNK-VFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGT--KVTVYMDHSEI--KYLLAKKDAKPRLIRWVLLLQD 124
L ASD A+G V+ Q+ + ++P+ Y + ++ AQLNY++ +KE+L I+ + +R YL T + DH + + + RL RW L LQD
Sbjct: 710 LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQD 810
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.592e-8 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 29 LMCHASDFAIGVVMGQRRNK-VFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGT--KVTVYMDHSEI--KYLLAKKDAKPRLIRWVLLLQD 124
L ASD A+G V+ Q+ + ++P+ Y + ++ AQLNY++ +KE+L I+ + +R YL T + DH + + + RL RW L LQD
Sbjct: 710 LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQD 810
BLAST of GB_A13G1185 vs. TAIR10
Match: ATMG00750.1 (| Symbols: ORF119 | GAG/POL/ENV polyprotein | chrM:220830-221189 FORWARD LENGTH=119) HSP 1 Score: 82.4185 bits (202), Expect = 3.928e-20 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query: 137 VLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFL 192
VLQA F+WPT FKDA+ +V +CD CQR NFT RNEMP+ I+EVE+FDV GI F+
Sbjct: 35 VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A5ASA6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020335 PE=4 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 7.163e-72 Identity = 123/249 (49.40%), Postives = 161/249 (64.66%), Query Frame = 0
Query: 3 KSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD---------------------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTND 224
KSF+ ++ ++ R +W LPFE+MC ASDFA+G V+GQR + + IYYA++TL AQ NYT EKELL +VFA DKFR+YLVG+ + V+ DHS +KYLL K+DAK L RW+LLLQ GGHF T +V+Q+ F+WP LFKDA++ K CD+CQR+ T RN MP I+ V++FDV GIDF+GPFP+SFGH YILV VD+VS+WV+A +ND
Sbjct: 1237 KSFEELKQFLTTAPIVRALNWKLPFEVMCDASDFAMGAVLGQREDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFALDKFRAYLVGSFIVVFTDHSALKYLLTKQDAKAILKRWILLLQKFNIQIRDKKEVENVQSGILSHCHDSACGGHFASQKTAMRVVQSGFWWPFLFKDAHSMCKGCDQCQRLGKLTCRNMMPLNPILIVDVFDVWGIDFMGPFPMSFGHSYILVGVDYVSKWVDAIPCRSND 1485
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A1U7XTC2_NICSY (uncharacterized protein LOC104240991 OS=Nicotiana sylvestris OX=4096 GN=LOC104240991 PE=4 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 1.099e-71 Identity = 116/206 (56.31%), Postives = 145/206 (70.39%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQDGGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
PDW+ PFELMC ASD+A+G V+GQR++KV HPIYYA+RTL+GAQLNYT+ EKE+L +VFAFDKFRSYL+G+K A P GG+F G T KVL+A F+WPT+FKDA+ +VK C+ CQR N + R+EMP I +VE+FDV GIDF+GPF S+G+KYILVAVD+VS+WVEA TND R
Sbjct: 523 PDWEQPFELMCDASDYAVGAVLGQRKDKVMHPIYYASRTLSGAQLNYTVTEKEMLAVVFAFDKFRSYLIGSKAC---------------HASPY----------GGYFGGVWTTTKVLEAGFYWPTIFKDAHQWVKGCNECQRTGNISRRHEMPMNPIQQVEVFDVWGIDFMGPFVSSYGNKYILVAVDYVSKWVEAATLPTNDSR 703
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A1U7VUR6_NICSY (uncharacterized protein LOC104219686 OS=Nicotiana sylvestris OX=4096 GN=LOC104219686 PE=4 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.114e-71 Identity = 112/242 (46.28%), Postives = 155/242 (64.05%), Query Frame = 0
Query: 22 DWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLI-----------------RWVLLLQD--------------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
+W+ PFELMC ASD+A+G V+G+R++K+ HPIYYA+RTL+G QLNYT+ EKE+L +VFAFDKFRSYL+G+KV +Y DH+ ++ +K + I W + + G HF G T+AKVL++ +WPTLFKDA+ ++K+CD CQ+ N + R+EMP I +VE+FDV GIDF+G F S+ +KYILVAVD+VS+WVEA TND +
Sbjct: 43 NWEQPFELMCDASDYAVGAVLGKRKDKIMHPIYYASRTLSGVQLNYTMTEKEMLAVVFAFDKFRSYLIGSKVIIYTDHATLRLEGVEKKVEVEEILDTFPDEQLLATSLEEAPWYADIANYLASGIVPYDLSSAYHASPYGVHFGGLRTIAKVLESGSYWPTLFKDAHLWIKDCDECQQTGNISRRHEMPMNPIQKVEVFDVWGIDFMGSFVNSYDNKYILVAVDYVSKWVEAATLHTNDAK 284
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A5AMS7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015385 PE=4 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.281e-71 Identity = 121/233 (51.93%), Postives = 153/233 (65.67%), Query Frame = 0
Query: 4 SFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPR----------LIRWVLLLQDGGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
SF ++ ++ R P+W LPFELMC ASDF+IG V+G+R + + IYYA +TL AQ NYT EKELL +VFA DKFR+YLVG+ + V+ DHS +KYLL K+DAK R ++ G HF T KVL + F WP+LFKDA+ K+CDRCQR+ T RN+MP I+ VELFDV GIDF+GPFP+SFG+ YILV VD+VS+WVEA ND R
Sbjct: 420 SFDQLKKFLTTTPIVRAPNWQLPFELMCDASDFSIGAVLGKREDGKPYVIYYARKTLNEAQRNYTTTEKELLAVVFALDKFRAYLVGSFIIVFTDHSALKYLLTKQDAKARKCVPEDEQQGILNHCHENACGDHFASQKTTMKVLNSGFTWPSLFKDAHIMCKSCDRCQRLGKLTKRNQMPMNPILIVELFDVWGIDFMGPFPMSFGNSYILVGVDYVSKWVEAIPCKQNDHR 652
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A371H8W2_MUCPR (Retrovirus-related Pol polyprotein (Fragment) OS=Mucuna pruriens OX=157652 GN=pol PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.969e-69 Identity = 114/246 (46.34%), Postives = 155/246 (63.01%), Query Frame = 0
Query: 2 LKSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRR--NKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQ------------------DGGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTN-RNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
+K+FQ ++ ++ + P+WDLPF+L+C AS+ A+G V+GQR + H I YA+RT+ AQ NYT EKELL IVFA DKFRSYL+ +K+ V+ DH ++YLL K DAKPRLI ++ + G H T KVL +WPT+F+DA+ +V C+RCQ+ N R EMP+ I+ E+FDV GIDF+GPFP+S G+ YIL+AVD+VSRWVE A TND +
Sbjct: 94 IKAFQELKDKLTSSPIFQAPNWDLPFKLVCDASNLALGAVLGQRARVGQPVHVIAYASRTMDPAQQNYTTTEKELLAIVFALDKFRSYLLDSKIIVFSDHDALRYLLKKPDAKPRLISDKVIYRCIPNAEIDSVLQFCHSAPGGDHHGSTQIARKVLDCGLYWPTIFRDAHQFVSTCERCQKAGMAMNRRREMPQQPILFCEVFDVWGIDFMGPFPISNGYSYILMAVDYVSRWVEVVATRTNDAK 339
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A1R3JGA8_COCAP (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_06326 PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.147e-69 Identity = 125/276 (45.29%), Postives = 161/276 (58.33%), Query Frame = 0
Query: 3 KSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD-----------------------------------------------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDV 225
K+F E +++ + P WDLPFELMC +SD A+G V+GQR NK+ H IYYA+R L AQ NYT E ELL IVFA KFRSYL+G +V V+ DH+ ++Y L+KK++KPRLIRW+LLLQ+ GGHF T KVL+ F+W ++FKDAY K CDRCQRV N + R++MP II VE+FDV GIDF+GPFP S + YIL+A D+VS+WVEA A T++
Sbjct: 1664 KAFDTLELALTSAPIVQPPRWDLPFELMCDSSDNAVGAVLGQRVNKLVHVIYYASRALNSAQRNYTKTENELLAIVFALVKFRSYLLGARVIVFSDHAALRYFLSKKESKPRLIRWILLLQEFHIEIKDKKGAKDLVADHLSRLHNGEDATPLVRRSIPQHEQASILGFCHSYACGGHFGPKRTARKVLECGFYWFSIFKDAYMICKTCDRCQRVGNSSQRDQMPLHPIIVVEIFDVWGIDFMGPFPKSSSNLYILLACDYVSKWVEAIATKTDNA 1939
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A1U7VVG7_NICSY (uncharacterized protein LOC104217386 OS=Nicotiana sylvestris OX=4096 GN=LOC104217386 PE=4 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.506e-69 Identity = 111/213 (52.11%), Postives = 150/213 (70.42%), Query Frame = 0
Query: 30 MCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD---------GGHFEGTHTVAKVLQAEFFWPTLFKD-------AYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
MC A+D+A+G V+GQR++K+ HPIYYA+RTL+G+QLNYT+ EKE+L +VFAFDKFRSYL+G KV VY DH+ +KYL+ KK++KPRLIRWVLLLQ+ G + ++++ AE + + A + + C+ CQR EN + +EMP I EVE+FDV+ IDF+G F SFG+KYILVAVD++S+WVEA A TND R
Sbjct: 1 MCDANDYAVGAVLGQRKDKLIHPIYYASRTLSGSQLNYTVTEKEILVVVFAFDKFRSYLIGLKVIVYTDHAALKYLIEKKESKPRLIRWVLLLQEFNLEIRDRKGTENQVADQLSRLEGAENSVEDILETFPDEQLLATSLEEGCNECQRTENISRHHEMPMNPIQEVEVFDVREIDFMGSFVSSFGNKYILVAVDYISKWVEAAALPTNDAR 213
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A0A2G9I766_9LAMI (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01653 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 8.741e-69 Identity = 123/237 (51.90%), Postives = 149/237 (62.87%), Query Frame = 0
Query: 21 PDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD---------------GGHFEGTHTVAKVLQAEFF----------------WPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
PDW PFELMC+ASDFAIG ++GQR++K+F IYYA++ L AQLNYT EKELL VFAFDKFRSYLVGTKV VY DH+ I+YL+ K D VLLLQ+ H + AK + P LFKDA+++V NCDRCQR+ N + R+EMP I+EVELFDV GIDF+GPF SFG+ YILVAVD+VS+WVEA A ND +
Sbjct: 758 PDWSFPFELMCNASDFAIGAILGQRKDKIFRSIYYASKILNDAQLNYTTTEKELLAFVFAFDKFRSYLVGTKVIVYTDHATIRYLIEKND--------VLLLQEFDLEIRDRKGTKNQIADHLSRLESPAKTNEPNLINDNFPDEQLLAIVALDMPCLFKDAHSFVANCDRCQRIGNISRRHEMPPNTILEVELFDVWGIDFMGPFVPSFGNMYILVAVDYVSKWVEAVAVPNNDSK 986
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: Q2R3E6_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g32200 PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.051e-68 Identity = 124/273 (45.42%), Postives = 162/273 (59.34%), Query Frame = 0
Query: 2 LKSFQGFEESISYDTHNRQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQ-------DGGHFEGT-----------------------------------------HTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTNDVR 226
LKSF+ ++++ Y + PDW LPFE+MC ASDFA+G V+GQ ++K H I YA++TLTGAQLN EKELL +VFA DKFR YLVG KV +Y DH+ +KYLL KKDAKPRL+RW+LLLQ D E + + +AK+ Q+ FFWPT+++D+ +V+ C CQR T R+ P T ++VE+FDV GIDF GPFP S +YILVAVD+VS+WVEA + D R
Sbjct: 84 LKSFEILKKALVYAPIIQPPDWTLPFEIMCDASDFAVGAVLGQTKDKKHHAICYASKTLTGAQLN---TEKELLVVVFAIDKFRYYLVGAKVIIYTDHAALKYLLTKKDAKPRLLRWILLLQEFDLEIKDKKGVENSVADHLSRLQITDMQEQPINDFLRDDMLMTVRDSNLWYANIVNYMAKIWQSGFFWPTMYEDSKEFVRRCTSCQRQGGITARDAKPLTYNLQVEIFDVWGIDFTGPFPKSRNCEYILVAVDYVSKWVEAMSCSAADAR 353
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Match: A5BG34_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003734 PE=4 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 2.805e-68 Identity = 119/248 (47.98%), Postives = 153/248 (61.69%), Query Frame = 0
Query: 19 RQPDWDLPFELMCHASDFAIGVVMGQRRNKVFHPIYYATRTLTGAQLNYTIKEKELLDIVFAFDKFRSYLVGTKVTVYMDHSEIKYLLAKKDAKPRLIRWVLLLQD------------------------------------------GGHFEGTHTVAKVLQAEFFWPTLFKDAYAYVKNCDRCQRVENFTNRNEMPRTNIIEVELFDVQGIDFLGPFPLSFGHKYILVAVDFVSRWVEAEAYLTND 224
R+P+WDLPFE+MC ASD A+G ++GQR + IYYA++TL AQ NYT EKELL +VFA DKFR+YLVG + ++ DHS +KYL+ KKD+K RLI W+LLLQ+ GG+F T K LQ+ F+WPT+FKDA+ K+CD+CQR+ T R+ MP I+ VELF + GIDF+G FPLSFG+ YILV VD+VS+WVEA A ND
Sbjct: 730 RRPNWDLPFEVMCDASDQAMGAILGQRDEGKPYVIYYASKTLNEAQKNYTTTEKELLAVVFALDKFRAYLVGAPIVIFTDHSXLKYLVNKKDSKARLIXWILLLQEFNLEIKDKKGVENVYCADQLIRKCVPEEEQQGILMQCHAYACGGYFSIQKTALKXLQSGFYWPTVFKDAHDVCKSCDKCQRLGKLTKRHMMPLNPILVVELFGIWGIDFMGLFPLSFGYSYILVGVDYVSKWVEAIACKHND 977 The following BLAST results are available for this feature:
BLAST of GB_A13G1185 vs. NCBI nr
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs NCBI nr) Total hits: 10
BLAST of GB_A13G1185 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs UniProt Swissprot) Total hits: 10
BLAST of GB_A13G1185 vs. TAIR10
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs arabidopsis TAIR10) Total hits: 1
BLAST of GB_A13G1185 vs. ExPASy TrEMBL
Analysis Date: 2019-03-30 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZJU v1.1 Gossypium barbadense proteins
Date Performed: 2019-03-29
Sequences
The
following sequences are available for this feature:
mRNA sequence >GB_A13G1185_ZJU-AD2_v1.1.a1 ID=GB_A13G1185_ZJU-AD2_v1.1.a1; Name=GB_A13G1185; organism=Gossypium barbadense; type=mRNA; length=678bpback to top protein sequence of GB_A13G1185_ZJU-AD2_v1.1.a1 >GB_A13G1185_ZJU-AD2_v1.1.a1 ID=GB_A13G1185_ZJU-AD2_v1.1.a1; Name=GB_A13G1185_ZJU-AD2_v1.1.a1; organism=Gossypium barbadense; type=polypeptide; length=226bpback to top mRNA from alignment at A13:55881275..55882320+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>GB_A13G1185_ZJU-AD2_v1.1.a1 ID=GB_A13G1185_ZJU-AD2_v1.1.a1; Name=GB_A13G1185; organism=Gossypium barbadense; type=mRNA; length=1046bp; location=Sequence derived from: A13:55881275..55882320+ (Gossypium barbadenseback to top Coding sequence (CDS) from alignment at A13:55881275..55882320+ >GB_A13G1185_ZJU-AD2_v1.1.a1 ID=GB_A13G1185_ZJU-AD2_v1.1.a1; Name=GB_A13G1185; organism=Gossypium barbadense; type=CDS; length=678bp; location=Sequence derived from: A13:55881275..55882320+ (Gossypium barbadenseback to top |