GH_D07G0983, GH_D07G0983_ZJU-AD1_v2.1.a1 (mRNA) Gossypium hirsutum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1029133498|ref|XP_016744940.1| (PREDICTED: uncharacterized protein LOC107954002 [Gossypium hirsutum] >gi|1344105226|gb|PPD79249.1| hypothetical protein GOBAR_DD23827 [Gossypium barbadense]) HSP 1 Score: 408.683 bits (1049), Expect = 4.152e-144 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|823123010|ref|XP_012473582.1| (PREDICTED: uncharacterized protein LOC105790478 isoform X3 [Gossypium raimondii] >gi|763741259|gb|KJB08758.1| hypothetical protein B456_001G102000 [Gossypium raimondii]) HSP 1 Score: 404.831 bits (1039), Expect = 1.639e-142 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQQHHQR HRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 1 MNEESNQQHHQRVHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|823123004|ref|XP_012473559.1| (PREDICTED: uncharacterized protein LOC105790478 isoform X2 [Gossypium raimondii] >gi|823123006|ref|XP_012473568.1| PREDICTED: uncharacterized protein LOC105790478 isoform X2 [Gossypium raimondii] >gi|823123008|ref|XP_012473575.1| PREDICTED: uncharacterized protein LOC105790478 isoform X2 [Gossypium raimondii]) HSP 1 Score: 394.43 bits (1012), Expect = 2.728e-138 Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0 Query: 5 SNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 SNQQHHQR HRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 20 SNQQHHQRVHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 220
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|823123002|ref|XP_012473550.1| (PREDICTED: uncharacterized protein LOC105790478 isoform X1 [Gossypium raimondii]) HSP 1 Score: 394.045 bits (1011), Expect = 9.458e-138 Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0 Query: 5 SNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 SNQQHHQR HRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 41 SNQQHHQRVHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 241
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1050563477|ref|XP_017612349.1| (PREDICTED: uncharacterized protein LOC108457719 isoform X4 [Gossypium arboreum]) HSP 1 Score: 390.578 bits (1002), Expect = 5.845e-137 Identity = 198/206 (96.12%), Postives = 200/206 (97.09%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRN-DGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQ HH RDHRN +GNPAVQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 1 MNEESNQHHHHRDHRNNEGNPAVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 206
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1050563473|ref|XP_017612331.1| (PREDICTED: uncharacterized protein LOC108457719 isoform X3 [Gossypium arboreum] >gi|1050563475|ref|XP_017612339.1| PREDICTED: uncharacterized protein LOC108457719 isoform X3 [Gossypium arboreum]) HSP 1 Score: 380.178 bits (975), Expect = 1.423e-132 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0 Query: 5 SNQQHHQRDHRN-DGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 SNQ HH RDHRN +GNPAVQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 20 SNQHHHHRDHRNNEGNPAVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 221
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1050563465|ref|XP_017612296.1| (PREDICTED: uncharacterized protein LOC108457719 isoform X1 [Gossypium arboreum] >gi|1050563467|ref|XP_017612304.1| PREDICTED: uncharacterized protein LOC108457719 isoform X1 [Gossypium arboreum] >gi|1050563469|ref|XP_017612312.1| PREDICTED: uncharacterized protein LOC108457719 isoform X1 [Gossypium arboreum]) HSP 1 Score: 381.719 bits (979), Expect = 2.169e-132 Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0 Query: 4 ESNQQHHQRDHRN-DGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 SNQ HH RDHRN +GNPAVQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 73 RSNQHHHHRDHRNNEGNPAVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 275
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1050563471|ref|XP_017612321.1| (PREDICTED: uncharacterized protein LOC108457719 isoform X2 [Gossypium arboreum]) HSP 1 Score: 379.793 bits (974), Expect = 4.550e-132 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0 Query: 5 SNQQHHQRDHRN-DGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 SNQ HH RDHRN +GNPAVQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 41 SNQHHHHRDHRNNEGNPAVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 242
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1028975145|ref|XP_016731027.1| (PREDICTED: uncharacterized protein LOC107941909, partial [Gossypium hirsutum]) HSP 1 Score: 361.303 bits (926), Expect = 2.106e-125 Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 0 Query: 19 NPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 P+VQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 20 TPSVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 206
BLAST of GH_D07G0983 vs. NCBI nr
Match: gi|1347692308|gb|PPR93066.1| (hypothetical protein GOBAR_AA27609 [Gossypium barbadense]) HSP 1 Score: 306.99 bits (785), Expect = 2.229e-102 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 48 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 152 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 309
BLAST of GH_D07G0983 vs. TAIR10
Match: AT3G07510.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2393895-2394464 REVERSE LENGTH=189) HSP 1 Score: 253.062 bits (645), Expect = 1.998e-86 Identity = 139/164 (84.76%), Postives = 150/164 (91.46%), Query Frame = 0 Query: 42 VHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 VHV+ALDGLVNVNSLFT+AVFVGLSL TPGQHSLE R+ CDA DVAKKLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR+GMM SAVGSVMGCLFLMLSMVNVI+IRLGLLSCGSKS+ A A LV LVS ALL+YISTA+YAF H Sbjct: 26 VHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189
BLAST of GH_D07G0983 vs. TAIR10
Match: AT3G07510.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2393895-2394464 REVERSE LENGTH=189) HSP 1 Score: 253.062 bits (645), Expect = 1.998e-86 Identity = 139/164 (84.76%), Postives = 150/164 (91.46%), Query Frame = 0 Query: 42 VHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 VHV+ALDGLVNVNSLFT+AVFVGLSL TPGQHSLE R+ CDA DVAKKLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR+GMM SAVGSVMGCLFLMLSMVNVI+IRLGLLSCGSKS+ A A LV LVS ALL+YISTA+YAF H Sbjct: 26 VHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189
BLAST of GH_D07G0983 vs. TAIR10
Match: AT2G01580.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:265181-265756 REVERSE LENGTH=191) HSP 1 Score: 188.734 bits (478), Expect = 4.754e-61 Identity = 100/158 (63.29%), Postives = 128/158 (81.01%), Query Frame = 0 Query: 46 ALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAF 203 ALDG+V+ NSLFTVAVFVG+S P +L +R C AG DV + L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ DE F+A+IN VLRFG++G+A GS++GC+FL+LS+V+VI++RLGLLSCG+ ++H LVVLVS AL VYI T Y+F Sbjct: 32 ALDGIVSANSLFTVAVFVGISFDQPSDLTLTDRTECSAGRDVERDLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSILGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189
BLAST of GH_D07G0983 vs. TAIR10
Match: AT5G05950.1 (| Symbols: MEE60 | maternal effect embryo arrest 60 | chr5:1788814-1789341 FORWARD LENGTH=175) HSP 1 Score: 139.813 bits (351), Expect = 4.630e-42 Identity = 81/172 (47.09%), Postives = 114/172 (66.28%), Query Frame = 0 Query: 39 KTSVHVTALDGLVNVNSLFTVAVFVGLSL-TTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLA--INLLNSKDVD---EAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAA-AALVVLVSLALLVYISTAVYAF 203 TS+H+TALDG+VNVNSLFT+AVF+GL+ T +SL C +A+ L+ F V SF+ FLFSSL+A GLK A +N+ +S + + ++N LRFGM+ S +GSV GC FLML+++NV++I+LG L CG+ +AA LV+LV AL +Y+S +YAF Sbjct: 2 TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYSFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGCGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173
BLAST of GH_D07G0983 vs. TAIR10
Match: AT3G46890.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:17266416-17267030 REVERSE LENGTH=204) HSP 1 Score: 97.0561 bits (240), Expect = 3.837e-25 Identity = 88/211 (41.71%), Postives = 123/211 (58.29%), Query Frame = 0 Query: 19 NPAVQ--SRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLS----LTTPGQHSL-EN----RAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLL----NSKDVDEAFR------AHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAA---LVVLVSLALLVYISTAVYAFLH 205 N AV+ RRL T T +HVTA+DG+VNVNSLF++A+F+GL+ +T P S EN R G +A++L+ V SFS FLFSSL+A LK AI N ++E R +NL LR G++ S V SV+GC FL +++V++++I+LG L C K S HA AA LVVLV AL++Y+ +YAF++ Sbjct: 5 NGAVEFLRRRLLPT---------TLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPALAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLEC--KRSFHALAAIVPLVVLVPSALIIYVFLVLYAFIY 204
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A2P5QXH1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23827 PE=4 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 3.488e-144 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A1U8P1G3_GOSHI (uncharacterized protein LOC107954002 OS=Gossypium hirsutum OX=3635 GN=LOC107954002 PE=4 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 3.488e-144 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A0D2N7U4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G102000 PE=4 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 1.377e-142 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0 Query: 1 MNEESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 MNEESNQQHHQR HRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 1 MNEESNQQHHQRVHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A1U8MW17_GOSHI (uncharacterized protein LOC107941909 OS=Gossypium hirsutum OX=3635 GN=LOC107941909 PE=4 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 1.769e-125 Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 0 Query: 19 NPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 P+VQSRRLTST SSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH Sbjct: 20 TPSVQSRRLTSTPSSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 206
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A2P5WPP8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27609 PE=4 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.872e-102 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 48 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKSSVHAAAALV LVS ALLVYISTAVYAFLH Sbjct: 152 DGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSSVHAAAALVALVSSALLVYISTAVYAFLH 309
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A061DNT8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002644 PE=4 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 5.402e-99 Identity = 172/202 (85.15%), Postives = 186/202 (92.08%), Query Frame = 0 Query: 4 ESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 E ++++ + + N+GNP RRLT T+SSSSS+ TSVHVTALDGLVNVNSLFT+AVFVGLSLTTPGQHSLENRAPCDA +DVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKS+VHA ALV+LVS ALLVYISTAVYAFLH Sbjct: 2 EGSEEYPKEYYTNNGNP----RRLTPTSSSSSST--TSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLENRAPCDADIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSAVHAVTALVILVSSALLVYISTAVYAFLH 197
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A0D2SEA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G160700 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 9.406e-97 Identity = 172/202 (85.15%), Postives = 187/202 (92.57%), Query Frame = 0 Query: 4 ESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 + + ++ + + ++GNP RRLTST+SSSSS+ TSVHVTALDGLVNVNSLFT+AVFVGLSL TPGQHSLENRAPCDAG+DVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGS+SS+HA AALV+LVS ALLVYISTAVYAFLH Sbjct: 2 DESGEYPKEYYTSNGNP----RRLTSTSSSSSST--TSVHVTALDGLVNVNSLFTIAVFVGLSLATPGQHSLENRAPCDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSQSSIHATAALVILVSSALLVYISTAVYAFLH 197
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A1U8K5G2_GOSHI (uncharacterized protein LOC107912509 OS=Gossypium hirsutum OX=3635 GN=LOC107912509 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 9.406e-97 Identity = 172/202 (85.15%), Postives = 187/202 (92.57%), Query Frame = 0 Query: 4 ESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 + + ++ + + ++GNP RRLTST+SSSSS+ TSVHVTALDGLVNVNSLFT+AVFVGLSL TPGQHSLENRAPCDAG+DVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGS+SS+HA AALV+LVS ALLVYISTAVYAFLH Sbjct: 2 DESGEYPKEYYTSNGNP----RRLTSTSSSSSST--TSVHVTALDGLVNVNSLFTIAVFVGLSLATPGQHSLENRAPCDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSQSSIHATAALVILVSSALLVYISTAVYAFLH 197
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A2P5VUZ8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA38068 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 9.406e-97 Identity = 172/202 (85.15%), Postives = 187/202 (92.57%), Query Frame = 0 Query: 4 ESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 + + ++ + + ++GNP RRLTST+SSSSS+ TSVHVTALDGLVNVNSLFT+AVFVGLSL TPGQHSLENRAPCDAG+DVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGS+SS+HA AALV+LVS ALLVYISTAVYAFLH Sbjct: 2 DESGEYPKEYYTSNGNP----RRLTSTSSSSSST--TSVHVTALDGLVNVNSLFTIAVFVGLSLATPGQHSLENRAPCDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSQSSIHATAALVILVSSALLVYISTAVYAFLH 197
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Match: A0A1R3H4R1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_21556 PE=4 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 1.365e-96 Identity = 170/202 (84.16%), Postives = 188/202 (93.07%), Query Frame = 0 Query: 4 ESNQQHHQRDHRNDGNPAVQSRRLTSTASSSSSSSKTSVHVTALDGLVNVNSLFTVAVFVGLSLTTPGQHSLENRAPCDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSKSSVHAAAALVVLVSLALLVYISTAVYAFLH 205 E ++++ + + ++GNP RR+TST+SSSSS+ TSVHVTALDGLVNVNSLFT+AVFVGLSLTTPGQHSLENRAPCDA +DVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLG+LSCGSKS+VHA +ALV+LVS ALLVYISTAVYAF+H Sbjct: 2 EESEKYPKEYYTSNGNP----RRVTSTSSSSSST--TSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLENRAPCDADIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSTVHAVSALVILVSSALLVYISTAVYAFMH 197 The following BLAST results are available for this feature:
BLAST of GH_D07G0983 vs. NCBI nr
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of GH_D07G0983 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 0
BLAST of GH_D07G0983 vs. TAIR10
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs arabidopsis TAIR10) Total hits: 5
BLAST of GH_D07G0983 vs. ExPASy TrEMBL
Analysis Date: 2019-03-29 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZJU v2.1 Gossypium hirsutum proteins
Date Performed: 2019-03-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >GH_D07G0983_ZJU-AD1_v2.1.a1 ID=GH_D07G0983_ZJU-AD1_v2.1.a1; Name=GH_D07G0983; organism=Gossypium hirsutum; type=mRNA; length=618bpback to top protein sequence of GH_D07G0983_ZJU-AD1_v2.1.a1 >GH_D07G0983_ZJU-AD1_v2.1.a1 ID=GH_D07G0983_ZJU-AD1_v2.1.a1; Name=GH_D07G0983_ZJU-AD1_v2.1.a1; organism=Gossypium hirsutum; type=polypeptide; length=205bpback to top mRNA from alignment at D07:11449757..11450482+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>GH_D07G0983_ZJU-AD1_v2.1.a1 ID=GH_D07G0983_ZJU-AD1_v2.1.a1; Name=GH_D07G0983; organism=Gossypium hirsutum; type=mRNA; length=726bp; location=Sequence derived from: D07:11449757..11450482+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at D07:11449757..11450482+ >GH_D07G0983_ZJU-AD1_v2.1.a1 ID=GH_D07G0983_ZJU-AD1_v2.1.a1; Name=GH_D07G0983; organism=Gossypium hirsutum; type=CDS; length=618bp; location=Sequence derived from: D07:11449757..11450482+ (Gossypium hirsutumback to top |